RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PRO1854Q9UHT4 67 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 LENEPQ9Y5L5 61 aa0.66□□□□□ -2.3
LINC01088-211ENST00000515597 LOC110117498A0A087WWA1 95 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 TRBV7-7A0A0K0K1E9 115 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 LINC00959A0A1B0GUT2 108 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 hADV29S1A0JD25 119 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 K7EP34 96 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 SFT2D2O95562 160 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 IAPPP10997 89 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 FAUP35544 74 aaKnown RBP0.65□□□□□ -2.31
LINC01088-211ENST00000515597 CRIP1P50238 77 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 RPS29P62273 56 aaKnown RBP0.65□□□□□ -2.31
LINC01088-211ENST00000515597 ZNF56Q15929 161 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 Q6ZQY7 126 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 C20orf197Q8N268 126 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 COX7B2Q8TF08 81 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 V9GYH0 126 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 V9GYV3 84 aa0.65□□□□□ -2.31
LINC01088-211ENST00000515597 CHKB-CPT1BH3BT56 60 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 SYS1-DBNDD2H3BUS1 97 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 PPP1R17O96001 155 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 APOC3P02656 99 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 ARMS2P0C7Q2 107 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 KLKP1Q107X0 134 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 COX17Q14061 63 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 PMCHL1Q16048 86 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 KRTAP19-7Q3SYF9 63 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 PYY3Q5JQD4 70 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 TMEM170BQ5T4T1 132 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 LINC00575Q6W349 94 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 KRTAP19-3Q7Z4W3 81 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 SERP2Q8N6R1 65 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 FAM213BQ8TBF2 198 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 S100A16Q96FQ6 103 aaKnown RBP0.64□□□□□ -2.31
LINC01088-211ENST00000515597 AMELXQ99217 191 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 PRO1933Q9H354 126 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 CACFD1Q9UGQ2 172 aa0.64□□□□□ -2.31
LINC01088-211ENST00000515597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.63□□□□□ -2.31
LINC01088-211ENST00000515597 TRAV21A0A0B4J279 112 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 LOC101927531A0A1B0GV80 90 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 KANTRA0A1W2PQU2 76 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 F2Z2F3 143 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 H3BVH4 76 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 M0QY20 66 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 NCR3O14931 201 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 SPAG11BQ08648 103 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 ADIRFQ15847 76 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 SMIM4Q8WVI0 70 aa0.63□□□□□ -2.31
LINC01088-211ENST00000515597 NXT2Q9NPJ8 142 aaKnown RBP0.63□□□□□ -2.31
LINC01088-211ENST00000515597 TRBV25-1A0A075B6N4 114 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 TRAV22A0A0B4J277 110 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 TRBV30A0A0K0K1B3 111 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 CTXND1A0A1B0GTU2 59 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 ZNF815PA8K554 130 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 UQCR11O14957 56 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 MT1EP04732 61 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 MGPP08493 103 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 ETDBQ3ZM63 59 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 C10orf113Q5VZT2 155 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 BAGE3Q86Y29 109 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 SPCS1Q9Y6A9 102 aa0.62□□□□□ -2.31
LINC01088-211ENST00000515597 TRAV1-2A0A0B4J238 106 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 A0A1W2PPM0 123 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 F8VRH5 84 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 ACYP1P07311 99 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 ACYP2P14621 99 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 SFTA2Q6UW10 78 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 SSBP3-AS1Q7Z2R9 100 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 BAGE2Q86Y30 109 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 MT1MQ8N339 61 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 C20orf78Q9BR46 151 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 ST20Q9HBF5 79 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 CDC42SE2Q9NRR3 84 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 ARL2-SNX15V9GYD0 113 aa0.61□□□□□ -2.31
LINC01088-211ENST00000515597 H7BZZ5 65 aa0.6□□□□□ -2.31
LINC01088-211ENST00000515597 SMIM11BQ8TCY0 68 aa0.6□□□□□ -2.31
LINC01088-211ENST00000515597 LINC00208Q96KT6 92 aa0.6□□□□□ -2.31
LINC01088-211ENST00000515597 SMIM31A0A1B0GVY4 71 aa0.59□□□□□ -2.31
LINC01088-211ENST00000515597 GCHFRP30047 84 aa0.59□□□□□ -2.31
LINC01088-211ENST00000515597 ALKAL2Q6UX46 152 aa0.59□□□□□ -2.31
LINC01088-211ENST00000515597 LINC00643Q86TS7 51 aa0.59□□□□□ -2.31
LINC01088-211ENST00000515597 PRR15LQ9BU68 103 aa0.59□□□□□ -2.31
LINC01088-211ENST00000515597 SMCO4Q9NRQ5 59 aa0.59□□□□□ -2.31
LINC01088-211ENST00000515597 D6R8Y8 96 aa0.58□□□□□ -2.32
LINC01088-211ENST00000515597 F8WEM9 126 aa0.58□□□□□ -2.32
LINC01088-211ENST00000515597 PDCD5O14737 125 aa0.58□□□□□ -2.32
LINC01088-211ENST00000515597 NDUFA1O15239 70 aa0.58□□□□□ -2.32
LINC01088-211ENST00000515597 LEPROTL1O95214 131 aa0.58□□□□□ -2.32
LINC01088-211ENST00000515597 ATP5EP2Q5VTU8 51 aa0.58□□□□□ -2.32
LINC01088-211ENST00000515597 MUSTN1Q8IVN3 82 aa0.58□□□□□ -2.32
LINC01088-211ENST00000515597 RPL39LQ96EH5 51 aaKnown RBP0.58□□□□□ -2.32
LINC01088-211ENST00000515597 LINC01558Q9Y6Z2 57 aa0.58□□□□□ -2.32
LINC01088-211ENST00000515597 A0A087WVE0 104 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 FXYD6-FXYD2A0A087WZ82 144 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 MYMXA0A1B0GTQ4 84 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 C7orf77A4D0Y5 90 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 H3BUT2 72 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 MT1GP13640 62 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 GNGT1P63211 74 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 BVES-AS1Q5T3Y7 98 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms