RNA–Protein interactions for RNA: ENST00000514152.5

SH3D19-210, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SH3D19, Length 5,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-210ENST00000514152 DNAH10Q8IVF4 4471 aa3.16□□□□□ -1.9
SH3D19-210ENST00000514152 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
SH3D19-210ENST00000514152 DNAH1Q9P2D7 4330 aa3.15□□□□□ -1.91
SH3D19-210ENST00000514152 PLECQ15149 4684 aaKnown RBP3.11□□□□□ -1.91
SH3D19-210ENST00000514152 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
SH3D19-210ENST00000514152 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
SH3D19-210ENST00000514152 ANK2Q01484 3957 aa3.1□□□□□ -1.91
SH3D19-210ENST00000514152 DNAH17Q9UFH2 4485 aa3.08□□□□□ -1.92
SH3D19-210ENST00000514152 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
SH3D19-210ENST00000514152 LORP23490 312 aaPredicted RBP3.07□□□□□ -1.92
SH3D19-210ENST00000514152 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
SH3D19-210ENST00000514152 KRTAP10-7P60409 375 aaPredicted RBP3.07□□□□□ -1.92
SH3D19-210ENST00000514152 DNAH3Q8TD57 4116 aa3.07□□□□□ -1.92
SH3D19-210ENST00000514152 VPS13DQ5THJ4 4388 aa3.06□□□□□ -1.92
SH3D19-210ENST00000514152 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
SH3D19-210ENST00000514152 DNAH8Q96JB1 4490 aa3.04□□□□□ -1.92
SH3D19-210ENST00000514152 DNAH11Q96DT5 4516 aa3.03□□□□□ -1.92
SH3D19-210ENST00000514152 DNAH5Q8TE73 4624 aa3.02□□□□□ -1.93
SH3D19-210ENST00000514152 DNAH2Q9P225 4427 aa3.02□□□□□ -1.93
SH3D19-210ENST00000514152 STARD9Q9P2P6 4700 aa2.99□□□□□ -1.93
SH3D19-210ENST00000514152 KRTAP4-5Q9BYR2 181 aa2.97□□□□□ -1.93
SH3D19-210ENST00000514152 CMYA5Q8N3K9 4069 aa2.96□□□□□ -1.94
SH3D19-210ENST00000514152 LYSTQ99698 3801 aa2.95□□□□□ -1.94
SH3D19-210ENST00000514152 FRAS1Q86XX4 4008 aa2.93□□□□□ -1.94
SH3D19-210ENST00000514152 SACSQ9NZJ4 4579 aa2.92□□□□□ -1.94
SH3D19-210ENST00000514152 LRP1BQ9NZR2 4599 aa2.92□□□□□ -1.94
SH3D19-210ENST00000514152 LCE2BO14633 110 aa2.92□□□□□ -1.94
SH3D19-210ENST00000514152 DYNC2H1Q8NCM8 4307 aaKnown RBP2.92□□□□□ -1.94
SH3D19-210ENST00000514152 KMT2AQ03164 3969 aa2.91□□□□□ -1.94
SH3D19-210ENST00000514152 DYNC1H1Q14204 4646 aaKnown RBP2.91□□□□□ -1.94
SH3D19-210ENST00000514152 LCE2CQ5TA81 110 aa2.89□□□□□ -1.95
SH3D19-210ENST00000514152 FAT1Q14517 4588 aa2.86□□□□□ -1.95
SH3D19-210ENST00000514152 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
SH3D19-210ENST00000514152 HECTD4Q9Y4D8 3996 aa2.86□□□□□ -1.95
SH3D19-210ENST00000514152 FAT2Q9NYQ8 4349 aa2.86□□□□□ -1.95
SH3D19-210ENST00000514152 PRKDCP78527 4128 aaKnown RBP2.85□□□□□ -1.95
SH3D19-210ENST00000514152 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
SH3D19-210ENST00000514152 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
SH3D19-210ENST00000514152 DNAH7Q8WXX0 4024 aa2.83□□□□□ -1.96
SH3D19-210ENST00000514152 DNAH6Q9C0G6 4158 aa2.82□□□□□ -1.96
SH3D19-210ENST00000514152 SPRR2GQ9BYE4 73 aa2.82□□□□□ -1.96
SH3D19-210ENST00000514152 DNHD1Q96M86 4753 aa2.81□□□□□ -1.96
SH3D19-210ENST00000514152 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
SH3D19-210ENST00000514152 LCE2AQ5TA79 106 aaPredicted RBP2.81□□□□□ -1.96
SH3D19-210ENST00000514152 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
SH3D19-210ENST00000514152 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
SH3D19-210ENST00000514152 APOBP04114 4563 aaKnown RBP2.79□□□□□ -1.96
SH3D19-210ENST00000514152 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
SH3D19-210ENST00000514152 FAT3Q8TDW7 4589 aa2.72□□□□□ -1.97
SH3D19-210ENST00000514152 MT2AP02795 61 aa2.7□□□□□ -1.98
SH3D19-210ENST00000514152 RYR1P21817 5038 aa2.7□□□□□ -1.98
SH3D19-210ENST00000514152 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
SH3D19-210ENST00000514152 MT1HP80294 61 aa2.69□□□□□ -1.98
SH3D19-210ENST00000514152 MYCBP2O75592 4640 aa2.69□□□□□ -1.98
SH3D19-210ENST00000514152 HYDINQ4G0P3 5121 aa2.67□□□□□ -1.98
SH3D19-210ENST00000514152 LRP1Q07954 4544 aaKnown RBP2.66□□□□□ -1.98
SH3D19-210ENST00000514152 MT1FP04733 61 aa2.65□□□□□ -1.98
SH3D19-210ENST00000514152 PKD1P98161 4303 aa2.63□□□□□ -1.99
SH3D19-210ENST00000514152 RYR3Q15413 4870 aa2.62□□□□□ -1.99
SH3D19-210ENST00000514152 PKHD1L1Q86WI1 4243 aa2.62□□□□□ -1.99
SH3D19-210ENST00000514152 KRTAP19-1Q8IUB9 90 aa2.6□□□□□ -1.99
SH3D19-210ENST00000514152 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
SH3D19-210ENST00000514152 PKHD1P08F94 4074 aa2.59□□□□□ -1.99
SH3D19-210ENST00000514152 RYR2Q92736 4967 aa2.59□□□□□ -2
SH3D19-210ENST00000514152 HSPG2P98160 4391 aa2.57□□□□□ -2
SH3D19-210ENST00000514152 MT1XP80297 61 aa2.56□□□□□ -2
SH3D19-210ENST00000514152 KIAA1109Q2LD37 5005 aa2.55□□□□□ -2
SH3D19-210ENST00000514152 TNXBP22105 4242 aa2.55□□□□□ -2
SH3D19-210ENST00000514152 KRTAP12-4P60329 112 aa2.53□□□□□ -2.01
SH3D19-210ENST00000514152 LRP2P98164 4655 aa2.52□□□□□ -2.01
SH3D19-210ENST00000514152 LPAP08519 4548 aa2.52□□□□□ -2.01
SH3D19-210ENST00000514152 MT1BP07438 61 aa2.49□□□□□ -2.01
SH3D19-210ENST00000514152 KMT2CQ8NEZ4 4911 aaKnown RBP2.48□□□□□ -2.01
SH3D19-210ENST00000514152 KRTAP9-8Q9BYQ0 159 aa2.43□□□□□ -2.02
SH3D19-210ENST00000514152 KRTAP19-2Q3LHN2 52 aa2.43□□□□□ -2.02
SH3D19-210ENST00000514152 LCE3BQ5TA77 95 aa2.42□□□□□ -2.02
SH3D19-210ENST00000514152 HERC1Q15751 4861 aa2.4□□□□□ -2.02
SH3D19-210ENST00000514152 MT1GP13640 62 aa2.4□□□□□ -2.02
SH3D19-210ENST00000514152 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.02
SH3D19-210ENST00000514152 HERC2O95714 4834 aa2.38□□□□□ -2.03
SH3D19-210ENST00000514152 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
SH3D19-210ENST00000514152 KRTAP4-8A0A0G2JLE6 195 aa2.36□□□□□ -2.03
SH3D19-210ENST00000514152 KRTAP4-8Q9BYQ9 185 aa2.36□□□□□ -2.03
SH3D19-210ENST00000514152 KRTAP9-3Q9BYQ3 159 aa2.36□□□□□ -2.03
SH3D19-210ENST00000514152 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
SH3D19-210ENST00000514152 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
SH3D19-210ENST00000514152 FLGP20930 4061 aaPredicted RBP2.35□□□□□ -2.03
SH3D19-210ENST00000514152 MT1LQ93083 61 aa2.32□□□□□ -2.04
SH3D19-210ENST00000514152 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
SH3D19-210ENST00000514152 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
SH3D19-210ENST00000514152 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.04
SH3D19-210ENST00000514152 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.04
SH3D19-210ENST00000514152 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
SH3D19-210ENST00000514152 MT1EP04732 61 aa2.28□□□□□ -2.05
SH3D19-210ENST00000514152 EPPK1P58107 5090 aaKnown RBP2.26□□□□□ -2.05
SH3D19-210ENST00000514152 ABCA13Q86UQ4 5058 aa2.25□□□□□ -2.05
SH3D19-210ENST00000514152 PRM1P04553 51 aa2.25□□□□□ -2.05
SH3D19-210ENST00000514152 KRTAP19-3Q7Z4W3 81 aa2.24□□□□□ -2.05
SH3D19-210ENST00000514152 PCLOQ9Y6V0 5065 aa2.24□□□□□ -2.05
SH3D19-210ENST00000514152 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms