RNA–Protein interactions for RNA: ENST00000514030.1

SNX2-212, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-212ENST00000514030 USP9YO00507 2555 aaPredicted RBP1.3□□□□□ -2.2
SNX2-212ENST00000514030 HIVEP1P15822 2718 aa1.3□□□□□ -2.2
SNX2-212ENST00000514030 NBEAL2Q6ZNJ1 2754 aa1.3□□□□□ -2.2
SNX2-212ENST00000514030 HECTD4Q9Y4D8 3996 aa1.29□□□□□ -2.2
SNX2-212ENST00000514030 MYO9AB2RTY4 2548 aa1.29□□□□□ -2.2
SNX2-212ENST00000514030 GCN1Q92616 2671 aaKnown RBP1.29□□□□□ -2.2
SNX2-212ENST00000514030 CFAP46Q8IYW2 2715 aa1.29□□□□□ -2.2
SNX2-212ENST00000514030 PDZD2O15018 2839 aa1.29□□□□□ -2.2
SNX2-212ENST00000514030 CHD8Q9HCK8 2581 aa1.28□□□□□ -2.2
SNX2-212ENST00000514030 ITPR3Q14573 2671 aa1.28□□□□□ -2.2
SNX2-212ENST00000514030 PKD1L1Q8TDX9 2849 aa1.28□□□□□ -2.2
SNX2-212ENST00000514030 A0A087WTM6 91 aa1.28□□□□□ -2.2
SNX2-212ENST00000514030 H1FX-AS1Q4G0G2 97 aa1.28□□□□□ -2.2
SNX2-212ENST00000514030 SSBP3-AS1Q7Z2R9 100 aa1.28□□□□□ -2.2
SNX2-212ENST00000514030 SONP18583 2426 aaKnown RBP1.28□□□□□ -2.2
SNX2-212ENST00000514030 PKD1L2Q7Z442 2459 aa1.28□□□□□ -2.2
SNX2-212ENST00000514030 PIEZO1Q92508 2521 aa1.28□□□□□ -2.2
SNX2-212ENST00000514030 NIPBLQ6KC79 2804 aaeCLIP1.28□□□□□ -2.2
SNX2-212ENST00000514030 EPG5Q9HCE0 2579 aa1.27□□□□□ -2.21
SNX2-212ENST00000514030 NUPR2A6NF83 97 aa1.27□□□□□ -2.21
SNX2-212ENST00000514030 APLNQ9ULZ1 77 aa1.27□□□□□ -2.21
SNX2-212ENST00000514030 TENM4Q6N022 2769 aa1.27□□□□□ -2.21
SNX2-212ENST00000514030 DNAH2Q9P225 4427 aa1.27□□□□□ -2.21
SNX2-212ENST00000514030 UNC79Q9P2D8 2635 aa1.27□□□□□ -2.21
SNX2-212ENST00000514030 ZNF462Q96JM2 2506 aa1.27□□□□□ -2.21
SNX2-212ENST00000514030 CSMD3Q7Z407 3707 aa1.27□□□□□ -2.21
SNX2-212ENST00000514030 PLECQ15149 4684 aaKnown RBP1.26□□□□□ -2.21
SNX2-212ENST00000514030 SPINK6Q6UWN8 80 aa1.26□□□□□ -2.21
SNX2-212ENST00000514030 SMR3AQ99954 134 aa1.26□□□□□ -2.21
SNX2-212ENST00000514030 SRRM2Q9UQ35 2752 aaKnown RBP1.26□□□□□ -2.21
SNX2-212ENST00000514030 TENM3Q9P273 2699 aa1.26□□□□□ -2.21
SNX2-212ENST00000514030 VWFP04275 2813 aa1.25□□□□□ -2.21
SNX2-212ENST00000514030 SETD2Q9BYW2 2564 aaPredicted RBP1.25□□□□□ -2.21
SNX2-212ENST00000514030 ACACBO00763 2458 aa1.25□□□□□ -2.21
SNX2-212ENST00000514030 CCDC168Q8NDH2 2452 aa1.25□□□□□ -2.21
SNX2-212ENST00000514030 COX6B2Q6YFQ2 88 aa1.25□□□□□ -2.21
SNX2-212ENST00000514030 POLQO75417 2590 aa1.25□□□□□ -2.21
SNX2-212ENST00000514030 HELZ2Q9BYK8 2649 aaKnown RBP1.24□□□□□ -2.21
SNX2-212ENST00000514030 DNAH5Q8TE73 4624 aa1.24□□□□□ -2.21
SNX2-212ENST00000514030 KRTAP10-4P60372 401 aaPredicted RBP1.24□□□□□ -2.21
SNX2-212ENST00000514030 CRIPTQ9P021 101 aa1.24□□□□□ -2.21
SNX2-212ENST00000514030 TENM1Q9UKZ4 2725 aa1.24□□□□□ -2.21
SNX2-212ENST00000514030 FLNAP21333 2647 aaKnown RBP1.24□□□□□ -2.21
SNX2-212ENST00000514030 MTORP42345 2549 aa1.24□□□□□ -2.21
SNX2-212ENST00000514030 MEGF8Q7Z7M0 2845 aa1.23□□□□□ -2.21
SNX2-212ENST00000514030 NBDYA0A0U1RRE5 68 aa1.23□□□□□ -2.21
SNX2-212ENST00000514030 FLG2Q5D862 2391 aaPredicted RBP1.23□□□□□ -2.21
SNX2-212ENST00000514030 FLNCQ14315 2725 aa1.23□□□□□ -2.21
SNX2-212ENST00000514030 PKHD1L1Q86WI1 4243 aa1.23□□□□□ -2.21
SNX2-212ENST00000514030 ACANP16112 2415 aa1.23□□□□□ -2.21
SNX2-212ENST00000514030 SPINK1P00995 79 aa1.22□□□□□ -2.21
SNX2-212ENST00000514030 IGSF10Q6WRI0 2623 aa1.21□□□□□ -2.22
SNX2-212ENST00000514030 HECTD1Q9ULT8 2610 aa1.21□□□□□ -2.22
SNX2-212ENST00000514030 KMT2AQ03164 3969 aa1.21□□□□□ -2.22
SNX2-212ENST00000514030 CENPEQ02224 2701 aa1.21□□□□□ -2.22
SNX2-212ENST00000514030 STARD9Q9P2P6 4700 aa1.21□□□□□ -2.22
SNX2-212ENST00000514030 RPL37P61927 97 aaKnown RBP1.21□□□□□ -2.22
SNX2-212ENST00000514030 C10orf95Q9H7T3 257 aa1.21□□□□□ -2.22
SNX2-212ENST00000514030 ABCA12Q86UK0 2595 aa1.21□□□□□ -2.22
SNX2-212ENST00000514030 FAM208BQ5VWN6 2430 aa1.2□□□□□ -2.22
SNX2-212ENST00000514030 VPS13BQ7Z7G8 4022 aa1.2□□□□□ -2.22
SNX2-212ENST00000514030 RPS29P62273 56 aaKnown RBP1.2□□□□□ -2.22
SNX2-212ENST00000514030 UBE2DNLQ8IWF7 75 aa1.2□□□□□ -2.22
SNX2-212ENST00000514030 COL7A1Q02388 2944 aa1.19□□□□□ -2.22
SNX2-212ENST00000514030 PKHD1P08F94 4074 aa1.19□□□□□ -2.22
SNX2-212ENST00000514030 TEP1Q99973 2627 aaKnown RBP1.19□□□□□ -2.22
SNX2-212ENST00000514030 MYCBP2O75592 4640 aa1.19□□□□□ -2.22
SNX2-212ENST00000514030 CACNA1AO00555 2505 aa1.18□□□□□ -2.22
SNX2-212ENST00000514030 LRP1Q07954 4544 aaKnown RBP1.18□□□□□ -2.22
SNX2-212ENST00000514030 S4R3F8 94 aa1.18□□□□□ -2.22
SNX2-212ENST00000514030 TNXBP22105 4242 aa1.18□□□□□ -2.22
SNX2-212ENST00000514030 LRP1BQ9NZR2 4599 aa1.18□□□□□ -2.22
SNX2-212ENST00000514030 PKD1P98161 4303 aa1.18□□□□□ -2.22
SNX2-212ENST00000514030 COL6A5A8TX70 2615 aa1.17□□□□□ -2.22
SNX2-212ENST00000514030 APOBP04114 4563 aaKnown RBP1.17□□□□□ -2.22
SNX2-212ENST00000514030 DYNC1H1Q14204 4646 aaKnown RBP1.17□□□□□ -2.22
SNX2-212ENST00000514030 FAT2Q9NYQ8 4349 aa1.17□□□□□ -2.22
SNX2-212ENST00000514030 MAST4O15021 2626 aa1.17□□□□□ -2.22
SNX2-212ENST00000514030 FLNBO75369 2602 aaKnown RBP1.17□□□□□ -2.22
SNX2-212ENST00000514030 USP24Q9UPU5 2620 aa1.17□□□□□ -2.22
SNX2-212ENST00000514030 NSD1Q96L73 2696 aaPredicted RBP1.16□□□□□ -2.22
SNX2-212ENST00000514030 HSPG2P98160 4391 aa1.16□□□□□ -2.22
SNX2-212ENST00000514030 ITPR2Q14571 2701 aa1.16□□□□□ -2.22
SNX2-212ENST00000514030 TGP01266 2768 aa1.15□□□□□ -2.22
SNX2-212ENST00000514030 FAT1Q14517 4588 aa1.15□□□□□ -2.23
SNX2-212ENST00000514030 MYO18BQ8IUG5 2567 aa1.14□□□□□ -2.23
SNX2-212ENST00000514030 ATRQ13535 2644 aa1.14□□□□□ -2.23
SNX2-212ENST00000514030 A0A0D9SG42 100 aa1.14□□□□□ -2.23
SNX2-212ENST00000514030 FAT3Q8TDW7 4589 aa1.14□□□□□ -2.23
SNX2-212ENST00000514030 STAB2Q8WWQ8 2551 aa1.14□□□□□ -2.23
SNX2-212ENST00000514030 FASNP49327 2511 aaKnown RBP1.14□□□□□ -2.23
SNX2-212ENST00000514030 NBEAL1Q6ZS30 2694 aa1.13□□□□□ -2.23
SNX2-212ENST00000514030 C9orf92A6NGG3 77 aa1.12□□□□□ -2.23
SNX2-212ENST00000514030 PLAC4Q8WY50 150 aa1.12□□□□□ -2.23
SNX2-212ENST00000514030 M0QZ58 72 aa1.11□□□□□ -2.23
SNX2-212ENST00000514030 NOTCH1P46531 2555 aa1.11□□□□□ -2.23
SNX2-212ENST00000514030 MGAM2Q2M2H8 2515 aa1.1□□□□□ -2.23
SNX2-212ENST00000514030 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
SNX2-212ENST00000514030 FLGP20930 4061 aaPredicted RBP1.08□□□□□ -2.24
SNX2-212ENST00000514030 DMBT1Q9UGM3 2413 aaPredicted RBP1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms