RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 CMYA5Q8N3K9 4069 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 PRRC2CQ9Y520 2896 aaKnown RBP0.68□□□□□ -2.3
LINC01088-210ENST00000513153 TNCP24821 2201 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 TACC2O95359 2948 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 TGP01266 2768 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 TENM2Q9NT68 2774 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 KNL1Q8NG31 2342 aa0.67□□□□□ -2.3
LINC01088-210ENST00000513153 HMCN2Q8NDA2 5059 aa0.67□□□□□ -2.3
LINC01088-210ENST00000513153 PKDREJQ9NTG1 2253 aa0.67□□□□□ -2.3
LINC01088-210ENST00000513153 ALMS1Q8TCU4 4167 aa0.67□□□□□ -2.3
LINC01088-210ENST00000513153 DEFB133Q30KQ1 61 aa0.67□□□□□ -2.3
LINC01088-210ENST00000513153 ARHGAP5-AS1Q96IT6 56 aa0.67□□□□□ -2.3
LINC01088-210ENST00000513153 SMIM2Q9BVW6 85 aa0.67□□□□□ -2.3
LINC01088-210ENST00000513153 RNF213Q63HN8 5207 aa0.67□□□□□ -2.3
LINC01088-210ENST00000513153 VWFP04275 2813 aa0.66□□□□□ -2.3
LINC01088-210ENST00000513153 MAP1AP78559 2803 aaPredicted RBP0.66□□□□□ -2.3
LINC01088-210ENST00000513153 HUWE1Q7Z6Z7 4374 aaKnown RBP0.66□□□□□ -2.3
LINC01088-210ENST00000513153 HECTD4Q9Y4D8 3996 aa0.66□□□□□ -2.3
LINC01088-210ENST00000513153 H0YGX0 51 aa0.66□□□□□ -2.3
LINC01088-210ENST00000513153 CRIP1P50238 77 aa0.66□□□□□ -2.3
LINC01088-210ENST00000513153 MINOS1Q5TGZ0 78 aa0.66□□□□□ -2.3
LINC01088-210ENST00000513153 LINC00308Q8TCZ7 52 aa0.66□□□□□ -2.3
LINC01088-210ENST00000513153 FAT4Q6V0I7 4981 aa0.66□□□□□ -2.3
LINC01088-210ENST00000513153 STAB2Q8WWQ8 2551 aa0.65□□□□□ -2.31
LINC01088-210ENST00000513153 CRYBG3Q68DQ2 2970 aa0.65□□□□□ -2.31
LINC01088-210ENST00000513153 PLCE1Q9P212 2302 aa0.65□□□□□ -2.31
LINC01088-210ENST00000513153 DNAH9Q9NYC9 4486 aa0.65□□□□□ -2.31
LINC01088-210ENST00000513153 ZANQ9Y493 2812 aa0.65□□□□□ -2.31
LINC01088-210ENST00000513153 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
LINC01088-210ENST00000513153 H3BSH0 61 aa0.64□□□□□ -2.31
LINC01088-210ENST00000513153 NDUFA1O15239 70 aa0.64□□□□□ -2.31
LINC01088-210ENST00000513153 PRB3Q04118 309 aaPredicted RBP0.64□□□□□ -2.31
LINC01088-210ENST00000513153 DYNC1H1Q14204 4646 aaKnown RBP0.64□□□□□ -2.31
LINC01088-210ENST00000513153 DNAH3Q8TD57 4116 aa0.64□□□□□ -2.31
LINC01088-210ENST00000513153 LYSTQ99698 3801 aa0.64□□□□□ -2.31
LINC01088-210ENST00000513153 AKAP6Q13023 2319 aa0.63□□□□□ -2.31
LINC01088-210ENST00000513153 FRAS1Q86XX4 4008 aa0.63□□□□□ -2.31
LINC01088-210ENST00000513153 DNAH7Q8WXX0 4024 aa0.63□□□□□ -2.31
LINC01088-210ENST00000513153 H0YGG7 62 aa0.63□□□□□ -2.31
LINC01088-210ENST00000513153 STATHP02808 62 aa0.63□□□□□ -2.31
LINC01088-210ENST00000513153 RPS27P42677 84 aaKnown RBP0.63□□□□□ -2.31
LINC01088-210ENST00000513153 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
LINC01088-210ENST00000513153 DCHS2Q6V1P9 2916 aa0.63□□□□□ -2.31
LINC01088-210ENST00000513153 DNAH10Q8IVF4 4471 aa0.63□□□□□ -2.31
LINC01088-210ENST00000513153 DNAH5Q8TE73 4624 aa0.63□□□□□ -2.31
LINC01088-210ENST00000513153 USF3Q68DE3 2245 aa0.62□□□□□ -2.31
LINC01088-210ENST00000513153 PLECQ15149 4684 aaKnown RBP0.62□□□□□ -2.31
LINC01088-210ENST00000513153 HSPG2P98160 4391 aa0.62□□□□□ -2.31
LINC01088-210ENST00000513153 DEFB108AA8MXU0 73 aa0.62□□□□□ -2.31
LINC01088-210ENST00000513153 RPL39P62891 51 aaKnown RBP0.62□□□□□ -2.31
LINC01088-210ENST00000513153 STARD9Q9P2P6 4700 aa0.62□□□□□ -2.31
LINC01088-210ENST00000513153 FAT2Q9NYQ8 4349 aa0.62□□□□□ -2.31
LINC01088-210ENST00000513153 LRP1BQ9NZR2 4599 aa0.62□□□□□ -2.31
LINC01088-210ENST00000513153 APOBP04114 4563 aaKnown RBP0.61□□□□□ -2.31
LINC01088-210ENST00000513153 POLR2KP53803 58 aaKnown RBP0.61□□□□□ -2.31
LINC01088-210ENST00000513153 RPL39LQ96EH5 51 aaKnown RBP0.61□□□□□ -2.31
LINC01088-210ENST00000513153 COX14Q96I36 57 aa0.61□□□□□ -2.31
LINC01088-210ENST00000513153 C6orf48Q9UBA6 75 aa0.61□□□□□ -2.31
LINC01088-210ENST00000513153 KMT2AQ03164 3969 aa0.61□□□□□ -2.31
LINC01088-210ENST00000513153 DNAH2Q9P225 4427 aa0.61□□□□□ -2.31
LINC01088-210ENST00000513153 PKHD1P08F94 4074 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 CSMD3Q7Z407 3707 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 LYNX1G3V0Z9 82 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 PRCDQ00LT1 54 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 LELP1Q5T871 98 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 FAT1Q14517 4588 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 NEBP20929 6669 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 COL7A1Q02388 2944 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 GPR98Q8WXG9 6306 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
LINC01088-210ENST00000513153 SSPOA2VEC9 5147 aa0.59□□□□□ -2.31
LINC01088-210ENST00000513153 H0YAA0 97 aa0.59□□□□□ -2.31
LINC01088-210ENST00000513153 H3BUA1 57 aa0.59□□□□□ -2.31
LINC01088-210ENST00000513153 DEFB130BP0DP73 79 aa0.59□□□□□ -2.31
LINC01088-210ENST00000513153 DEFB130AP0DP74 79 aa0.59□□□□□ -2.31
LINC01088-210ENST00000513153 SRRM2Q9UQ35 2752 aaKnown RBP0.59□□□□□ -2.32
LINC01088-210ENST00000513153 VPS13DQ5THJ4 4388 aa0.59□□□□□ -2.32
LINC01088-210ENST00000513153 USH2AO75445 5202 aa0.59□□□□□ -2.32
LINC01088-210ENST00000513153 DNAH17Q9UFH2 4485 aa0.58□□□□□ -2.32
LINC01088-210ENST00000513153 SYNE2Q8WXH0 6885 aaKnown RBP0.58□□□□□ -2.32
LINC01088-210ENST00000513153 IGLV5-48A0A075B6I7 105 aa0.58□□□□□ -2.32
LINC01088-210ENST00000513153 DEFB106AQ8N104 65 aa0.58□□□□□ -2.32
LINC01088-210ENST00000513153 LEAP2Q969E1 77 aa0.58□□□□□ -2.32
LINC01088-210ENST00000513153 WNK2Q9Y3S1 2297 aa0.58□□□□□ -2.32
LINC01088-210ENST00000513153 PKHD1L1Q86WI1 4243 aa0.58□□□□□ -2.32
LINC01088-210ENST00000513153 FAT3Q8TDW7 4589 aa0.57□□□□□ -2.32
LINC01088-210ENST00000513153 DNAH6Q9C0G6 4158 aa0.57□□□□□ -2.32
LINC01088-210ENST00000513153 MMP24-AS1A0A0U1RRL7 71 aa0.57□□□□□ -2.32
LINC01088-210ENST00000513153 M0QY20 66 aa0.57□□□□□ -2.32
LINC01088-210ENST00000513153 LRP2P98164 4655 aa0.57□□□□□ -2.32
LINC01088-210ENST00000513153 VPS13BQ7Z7G8 4022 aa0.56□□□□□ -2.32
LINC01088-210ENST00000513153 WT1-ASQ06250 92 aa0.56□□□□□ -2.32
LINC01088-210ENST00000513153 DEFB135Q30KP9 77 aa0.56□□□□□ -2.32
LINC01088-210ENST00000513153 DEFB110Q30KQ9 67 aa0.56□□□□□ -2.32
LINC01088-210ENST00000513153 RPL39P5Q59GN2 51 aa0.56□□□□□ -2.32
LINC01088-210ENST00000513153 WFDC10BQ8IUB3 73 aa0.56□□□□□ -2.32
LINC01088-210ENST00000513153 DEFB108BQ8NET1 73 aa0.56□□□□□ -2.32
LINC01088-210ENST00000513153 TMEM167AQ8TBQ9 72 aa0.56□□□□□ -2.32
LINC01088-210ENST00000513153 HRNRQ86YZ3 2850 aaPredicted RBP0.55□□□□□ -2.32
LINC01088-210ENST00000513153 M0R2T5 61 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms