RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 KRTAP3-3Q9BYR6 98 aa3.21□□□□□ -1.9
KDM3B-207ENST00000510866 DNAH5Q8TE73 4624 aa3.19□□□□□ -1.9
KDM3B-207ENST00000510866 PLECQ15149 4684 aaKnown RBP3.18□□□□□ -1.9
KDM3B-207ENST00000510866 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
KDM3B-207ENST00000510866 KRTAP3-2Q9BYR7 98 aa3.16□□□□□ -1.9
KDM3B-207ENST00000510866 DNAH11Q96DT5 4516 aa3.15□□□□□ -1.9
KDM3B-207ENST00000510866 VPS13DQ5THJ4 4388 aa3.15□□□□□ -1.91
KDM3B-207ENST00000510866 DNAH10Q8IVF4 4471 aa3.14□□□□□ -1.91
KDM3B-207ENST00000510866 CSMD3Q7Z407 3707 aa3.13□□□□□ -1.91
KDM3B-207ENST00000510866 DNAH3Q8TD57 4116 aa3.12□□□□□ -1.91
KDM3B-207ENST00000510866 DNAH17Q9UFH2 4485 aa3.12□□□□□ -1.91
KDM3B-207ENST00000510866 DNAH2Q9P225 4427 aa3.1□□□□□ -1.91
KDM3B-207ENST00000510866 ANK2Q01484 3957 aa3.09□□□□□ -1.91
KDM3B-207ENST00000510866 DNHD1Q96M86 4753 aa3.09□□□□□ -1.92
KDM3B-207ENST00000510866 FAT2Q9NYQ8 4349 aa3.09□□□□□ -1.92
KDM3B-207ENST00000510866 LORP23490 312 aaPredicted RBP3.08□□□□□ -1.92
KDM3B-207ENST00000510866 DYNC1H1Q14204 4646 aaKnown RBP3.07□□□□□ -1.92
KDM3B-207ENST00000510866 KRTAP4-1Q9BYQ7 146 aa3.07□□□□□ -1.92
KDM3B-207ENST00000510866 STARD9Q9P2P6 4700 aa3.06□□□□□ -1.92
KDM3B-207ENST00000510866 LRP1BQ9NZR2 4599 aa3.06□□□□□ -1.92
KDM3B-207ENST00000510866 MT1HP80294 61 aa3.06□□□□□ -1.92
KDM3B-207ENST00000510866 DYNC2H1Q8NCM8 4307 aaKnown RBP3.06□□□□□ -1.92
KDM3B-207ENST00000510866 CMYA5Q8N3K9 4069 aa3.05□□□□□ -1.92
KDM3B-207ENST00000510866 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
KDM3B-207ENST00000510866 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
KDM3B-207ENST00000510866 PRKDCP78527 4128 aaKnown RBP3.03□□□□□ -1.92
KDM3B-207ENST00000510866 DNAH6Q9C0G6 4158 aa3.03□□□□□ -1.92
KDM3B-207ENST00000510866 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
KDM3B-207ENST00000510866 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
KDM3B-207ENST00000510866 SACSQ9NZJ4 4579 aa2.99□□□□□ -1.93
KDM3B-207ENST00000510866 KMT2AQ03164 3969 aa2.98□□□□□ -1.93
KDM3B-207ENST00000510866 MT2AP02795 61 aa2.97□□□□□ -1.93
KDM3B-207ENST00000510866 DNAH8Q96JB1 4490 aa2.96□□□□□ -1.94
KDM3B-207ENST00000510866 DNAH7Q8WXX0 4024 aa2.96□□□□□ -1.94
KDM3B-207ENST00000510866 FAT1Q14517 4588 aa2.95□□□□□ -1.94
KDM3B-207ENST00000510866 RYR1P21817 5038 aa2.92□□□□□ -1.94
KDM3B-207ENST00000510866 VPS13BQ7Z7G8 4022 aa2.91□□□□□ -1.94
KDM3B-207ENST00000510866 MT1FP04733 61 aa2.91□□□□□ -1.94
KDM3B-207ENST00000510866 KRTAP17-1Q9BYP8 105 aa2.88□□□□□ -1.95
KDM3B-207ENST00000510866 SPRR2GQ9BYE4 73 aa2.88□□□□□ -1.95
KDM3B-207ENST00000510866 RYR3Q15413 4870 aa2.86□□□□□ -1.95
KDM3B-207ENST00000510866 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
KDM3B-207ENST00000510866 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
KDM3B-207ENST00000510866 FRAS1Q86XX4 4008 aa2.84□□□□□ -1.96
KDM3B-207ENST00000510866 LYSTQ99698 3801 aa2.83□□□□□ -1.96
KDM3B-207ENST00000510866 FAT3Q8TDW7 4589 aa2.83□□□□□ -1.96
KDM3B-207ENST00000510866 HECTD4Q9Y4D8 3996 aa2.81□□□□□ -1.96
KDM3B-207ENST00000510866 HSPG2P98160 4391 aa2.78□□□□□ -1.97
KDM3B-207ENST00000510866 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
KDM3B-207ENST00000510866 RYR2Q92736 4967 aa2.76□□□□□ -1.97
KDM3B-207ENST00000510866 KRTAP19-4Q3LI73 84 aa2.76□□□□□ -1.97
KDM3B-207ENST00000510866 KRTAP10-7P60409 375 aaPredicted RBP2.76□□□□□ -1.97
KDM3B-207ENST00000510866 PKHD1L1Q86WI1 4243 aa2.74□□□□□ -1.97
KDM3B-207ENST00000510866 BIRC6Q9NR09 4857 aa2.72□□□□□ -1.97
KDM3B-207ENST00000510866 SPRR2EP22531 72 aa2.72□□□□□ -1.97
KDM3B-207ENST00000510866 SPRR2BP35325 72 aa2.72□□□□□ -1.97
KDM3B-207ENST00000510866 SPRR2AP35326 72 aa2.72□□□□□ -1.97
KDM3B-207ENST00000510866 HYDINQ4G0P3 5121 aa2.7□□□□□ -1.98
KDM3B-207ENST00000510866 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
KDM3B-207ENST00000510866 HERC1Q15751 4861 aa2.7□□□□□ -1.98
KDM3B-207ENST00000510866 KRTAP19-8Q3LI54 63 aa2.69□□□□□ -1.98
KDM3B-207ENST00000510866 KIAA1109Q2LD37 5005 aa2.69□□□□□ -1.98
KDM3B-207ENST00000510866 KRTAP19-1Q8IUB9 90 aa2.67□□□□□ -1.98
KDM3B-207ENST00000510866 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
KDM3B-207ENST00000510866 KRTAP9-8Q9BYQ0 159 aa2.66□□□□□ -1.98
KDM3B-207ENST00000510866 MYCBP2O75592 4640 aa2.66□□□□□ -1.98
KDM3B-207ENST00000510866 HERC2O95714 4834 aa2.64□□□□□ -1.99
KDM3B-207ENST00000510866 PKD1P98161 4303 aa2.63□□□□□ -1.99
KDM3B-207ENST00000510866 PKHD1P08F94 4074 aa2.63□□□□□ -1.99
KDM3B-207ENST00000510866 LCE2CQ5TA81 110 aa2.63□□□□□ -1.99
KDM3B-207ENST00000510866 SPRR2DP22532 72 aa2.63□□□□□ -1.99
KDM3B-207ENST00000510866 MT1XP80297 61 aa2.62□□□□□ -1.99
KDM3B-207ENST00000510866 MT1BP07438 61 aa2.62□□□□□ -1.99
KDM3B-207ENST00000510866 LPAP08519 4548 aa2.61□□□□□ -1.99
KDM3B-207ENST00000510866 TNXBP22105 4242 aa2.61□□□□□ -1.99
KDM3B-207ENST00000510866 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
KDM3B-207ENST00000510866 LCE2BO14633 110 aa2.58□□□□□ -2
KDM3B-207ENST00000510866 MUC17Q685J3 4493 aa2.55□□□□□ -2
KDM3B-207ENST00000510866 KRTAP4-8A0A0G2JLE6 195 aa2.54□□□□□ -2
KDM3B-207ENST00000510866 KRTAP4-8Q9BYQ9 185 aa2.54□□□□□ -2
KDM3B-207ENST00000510866 MT1GP13640 62 aa2.52□□□□□ -2.01
KDM3B-207ENST00000510866 PCLOQ9Y6V0 5065 aa2.52□□□□□ -2.01
KDM3B-207ENST00000510866 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
KDM3B-207ENST00000510866 LRP2P98164 4655 aa2.52□□□□□ -2.01
KDM3B-207ENST00000510866 LCE3BQ5TA77 95 aa2.5□□□□□ -2.01
KDM3B-207ENST00000510866 KRTAP9-2Q9BYQ4 174 aa2.49□□□□□ -2.01
KDM3B-207ENST00000510866 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
KDM3B-207ENST00000510866 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
KDM3B-207ENST00000510866 KMT2CQ8NEZ4 4911 aaKnown RBP2.47□□□□□ -2.01
KDM3B-207ENST00000510866 FLGP20930 4061 aaPredicted RBP2.44□□□□□ -2.02
KDM3B-207ENST00000510866 EPPK1P58107 5090 aaKnown RBP2.43□□□□□ -2.02
KDM3B-207ENST00000510866 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
KDM3B-207ENST00000510866 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.03
KDM3B-207ENST00000510866 LCE2DQ5TA82 110 aaPredicted RBP2.4□□□□□ -2.03
KDM3B-207ENST00000510866 MT3P25713 68 aa2.39□□□□□ -2.03
KDM3B-207ENST00000510866 KRTAP9-6A0A140TA67 174 aa2.38□□□□□ -2.03
KDM3B-207ENST00000510866 ABCA13Q86UQ4 5058 aa2.37□□□□□ -2.03
KDM3B-207ENST00000510866 MT1EP04732 61 aa2.37□□□□□ -2.03
KDM3B-207ENST00000510866 MT1LQ93083 61 aa2.36□□□□□ -2.03
KDM3B-207ENST00000510866 LCE2AQ5TA79 106 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms