RNA–Protein interactions for RNA: ENST00000510335.5

PTPN20-224, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,153 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-224ENST00000510335 SACSQ9NZJ4 4579 aa4.6□□□□□ -1.67
PTPN20-224ENST00000510335 A8MUU9 505 aa4.59□□□□□ -1.67
PTPN20-224ENST00000510335 KMT2AQ03164 3969 aa4.58□□□□□ -1.68
PTPN20-224ENST00000510335 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
PTPN20-224ENST00000510335 LINC00304Q8N9R0 145 aa4.58□□□□□ -1.68
PTPN20-224ENST00000510335 MEGF8Q7Z7M0 2845 aa4.56□□□□□ -1.68
PTPN20-224ENST00000510335 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
PTPN20-224ENST00000510335 H0YAA0 97 aa4.53□□□□□ -1.68
PTPN20-224ENST00000510335 H1FX-AS1Q4G0G2 97 aa4.52□□□□□ -1.69
PTPN20-224ENST00000510335 PKD1P98161 4303 aa4.52□□□□□ -1.69
PTPN20-224ENST00000510335 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
PTPN20-224ENST00000510335 A0A1B0GU33 70 aa4.51□□□□□ -1.69
PTPN20-224ENST00000510335 CSAG1Q6PB30 78 aa4.51□□□□□ -1.69
PTPN20-224ENST00000510335 PKHD1L1Q86WI1 4243 aa4.48□□□□□ -1.69
PTPN20-224ENST00000510335 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
PTPN20-224ENST00000510335 COX6B2Q6YFQ2 88 aa4.47□□□□□ -1.69
PTPN20-224ENST00000510335 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
PTPN20-224ENST00000510335 VPS13BQ7Z7G8 4022 aa4.44□□□□□ -1.7
PTPN20-224ENST00000510335 TGP01266 2768 aa4.43□□□□□ -1.7
PTPN20-224ENST00000510335 K7ERS5 55 aa4.43□□□□□ -1.7
PTPN20-224ENST00000510335 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
PTPN20-224ENST00000510335 APOBP04114 4563 aaKnown RBP4.42□□□□□ -1.7
PTPN20-224ENST00000510335 A0A1B0GVY2 172 aa4.38□□□□□ -1.71
PTPN20-224ENST00000510335 C9orf92A6NGG3 77 aa4.38□□□□□ -1.71
PTPN20-224ENST00000510335 DYNC1H1Q14204 4646 aaKnown RBP4.36□□□□□ -1.71
PTPN20-224ENST00000510335 PKHD1P08F94 4074 aa4.36□□□□□ -1.71
PTPN20-224ENST00000510335 KRTAP21-3Q3LHN1 58 aa4.35□□□□□ -1.71
PTPN20-224ENST00000510335 HYDINQ4G0P3 5121 aa4.34□□□□□ -1.71
PTPN20-224ENST00000510335 ROMO1P60602 79 aa4.34□□□□□ -1.71
PTPN20-224ENST00000510335 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
PTPN20-224ENST00000510335 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
PTPN20-224ENST00000510335 DNHD1Q96M86 4753 aa4.32□□□□□ -1.72
PTPN20-224ENST00000510335 SMR3BP02814 79 aaPredicted RBP4.27□□□□□ -1.73
PTPN20-224ENST00000510335 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
PTPN20-224ENST00000510335 S4R3F8 94 aa4.27□□□□□ -1.73
PTPN20-224ENST00000510335 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
PTPN20-224ENST00000510335 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
PTPN20-224ENST00000510335 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
PTPN20-224ENST00000510335 TNXBP22105 4242 aa4.24□□□□□ -1.73
PTPN20-224ENST00000510335 FAT1Q14517 4588 aa4.24□□□□□ -1.73
PTPN20-224ENST00000510335 FLG2Q5D862 2391 aaPredicted RBP4.24□□□□□ -1.73
PTPN20-224ENST00000510335 HSPG2P98160 4391 aa4.21□□□□□ -1.74
PTPN20-224ENST00000510335 LRP1Q07954 4544 aaKnown RBP4.2□□□□□ -1.74
PTPN20-224ENST00000510335 KRTAP17-1Q9BYP8 105 aa4.19□□□□□ -1.74
PTPN20-224ENST00000510335 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
PTPN20-224ENST00000510335 M0QZ58 72 aa4.16□□□□□ -1.74
PTPN20-224ENST00000510335 P0C880 135 aa4.16□□□□□ -1.74
PTPN20-224ENST00000510335 RYR2Q92736 4967 aa4.15□□□□□ -1.75
PTPN20-224ENST00000510335 A0A0D9SG42 100 aa4.13□□□□□ -1.75
PTPN20-224ENST00000510335 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
PTPN20-224ENST00000510335 KRTAP12-2P59991 146 aa4.12□□□□□ -1.75
PTPN20-224ENST00000510335 Q5VSD8 79 aa4.12□□□□□ -1.75
PTPN20-224ENST00000510335 CRIPTQ9P021 101 aa4.12□□□□□ -1.75
PTPN20-224ENST00000510335 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
PTPN20-224ENST00000510335 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
PTPN20-224ENST00000510335 MT1HL1P0DM35 61 aa4.07□□□□□ -1.76
PTPN20-224ENST00000510335 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
PTPN20-224ENST00000510335 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
PTPN20-224ENST00000510335 RYR1P21817 5038 aa4.03□□□□□ -1.76
PTPN20-224ENST00000510335 DMBT1Q9UGM3 2413 aaPredicted RBP4.01□□□□□ -1.77
PTPN20-224ENST00000510335 MYCBP2O75592 4640 aa4□□□□□ -1.77
PTPN20-224ENST00000510335 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
PTPN20-224ENST00000510335 R4GN34 69 aa3.93□□□□□ -1.78
PTPN20-224ENST00000510335 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
PTPN20-224ENST00000510335 KMT2CQ8NEZ4 4911 aaKnown RBP3.9□□□□□ -1.78
PTPN20-224ENST00000510335 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
PTPN20-224ENST00000510335 RYR3Q15413 4870 aa3.86□□□□□ -1.79
PTPN20-224ENST00000510335 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
PTPN20-224ENST00000510335 LRP2P98164 4655 aa3.82□□□□□ -1.8
PTPN20-224ENST00000510335 MT3P25713 68 aa3.82□□□□□ -1.8
PTPN20-224ENST00000510335 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
PTPN20-224ENST00000510335 MUC17Q685J3 4493 aa3.81□□□□□ -1.8
PTPN20-224ENST00000510335 LPAP08519 4548 aa3.81□□□□□ -1.8
PTPN20-224ENST00000510335 KIAA1109Q2LD37 5005 aa3.8□□□□□ -1.8
PTPN20-224ENST00000510335 KRTAP4-1Q9BYQ7 146 aa3.75□□□□□ -1.81
PTPN20-224ENST00000510335 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
PTPN20-224ENST00000510335 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
PTPN20-224ENST00000510335 HERC1Q15751 4861 aa3.7□□□□□ -1.82
PTPN20-224ENST00000510335 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
PTPN20-224ENST00000510335 TNP1P09430 55 aa3.67□□□□□ -1.82
PTPN20-224ENST00000510335 ABCA13Q86UQ4 5058 aa3.66□□□□□ -1.82
PTPN20-224ENST00000510335 EPPK1P58107 5090 aaKnown RBP3.63□□□□□ -1.83
PTPN20-224ENST00000510335 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
PTPN20-224ENST00000510335 FLGP20930 4061 aaPredicted RBP3.62□□□□□ -1.83
PTPN20-224ENST00000510335 BIRC6Q9NR09 4857 aa3.6□□□□□ -1.83
PTPN20-224ENST00000510335 SPRR2GQ9BYE4 73 aa3.59□□□□□ -1.83
PTPN20-224ENST00000510335 HERC2O95714 4834 aa3.51□□□□□ -1.85
PTPN20-224ENST00000510335 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
PTPN20-224ENST00000510335 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
PTPN20-224ENST00000510335 KRTAP8-1Q8IUC2 63 aa3.44□□□□□ -1.86
PTPN20-224ENST00000510335 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
PTPN20-224ENST00000510335 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
PTPN20-224ENST00000510335 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
PTPN20-224ENST00000510335 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
PTPN20-224ENST00000510335 MT1HP80294 61 aa3.38□□□□□ -1.87
PTPN20-224ENST00000510335 MT2AP02795 61 aa3.37□□□□□ -1.87
PTPN20-224ENST00000510335 PCLOQ9Y6V0 5065 aa3.37□□□□□ -1.87
PTPN20-224ENST00000510335 INE1O15225 51 aa3.36□□□□□ -1.87
PTPN20-224ENST00000510335 MT1FP04733 61 aa3.35□□□□□ -1.87
PTPN20-224ENST00000510335 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms