RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 SSBP3-AS1Q7Z2R9 100 aa2.31□□□□□ -2.04
CALCOCO2-208ENST00000506971 LINC00208Q96KT6 92 aa2.31□□□□□ -2.04
CALCOCO2-208ENST00000506971 MRPL34Q9BQ48 92 aaKnown RBP2.3□□□□□ -2.04
CALCOCO2-208ENST00000506971 ANK2Q01484 3957 aa2.3□□□□□ -2.04
CALCOCO2-208ENST00000506971 HYDINQ4G0P3 5121 aa2.29□□□□□ -2.04
CALCOCO2-208ENST00000506971 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
CALCOCO2-208ENST00000506971 Q96NJ1 140 aa2.29□□□□□ -2.04
CALCOCO2-208ENST00000506971 DYNC2H1Q8NCM8 4307 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-208ENST00000506971 CMYA5Q8N3K9 4069 aa2.29□□□□□ -2.04
CALCOCO2-208ENST00000506971 KIAA1109Q2LD37 5005 aa2.28□□□□□ -2.04
CALCOCO2-208ENST00000506971 DNAH9Q9NYC9 4486 aa2.28□□□□□ -2.05
CALCOCO2-208ENST00000506971 KRTAP13-2Q52LG2 175 aa2.27□□□□□ -2.05
CALCOCO2-208ENST00000506971 STAB2Q8WWQ8 2551 aa2.27□□□□□ -2.05
CALCOCO2-208ENST00000506971 RPS29P62273 56 aaKnown RBP2.26□□□□□ -2.05
CALCOCO2-208ENST00000506971 MGAM2Q2M2H8 2515 aa2.25□□□□□ -2.05
CALCOCO2-208ENST00000506971 A0A0G2JQZ4 141 aa2.25□□□□□ -2.05
CALCOCO2-208ENST00000506971 MIR22HGQ0VDD5 57 aa2.25□□□□□ -2.05
CALCOCO2-208ENST00000506971 Q6ZSA8 131 aa2.25□□□□□ -2.05
CALCOCO2-208ENST00000506971 COA5Q86WW8 74 aa2.25□□□□□ -2.05
CALCOCO2-208ENST00000506971 P0C880 135 aa2.24□□□□□ -2.05
CALCOCO2-208ENST00000506971 KMT2CQ8NEZ4 4911 aaKnown RBP2.24□□□□□ -2.05
CALCOCO2-208ENST00000506971 EPPK1P58107 5090 aaKnown RBP2.24□□□□□ -2.05
CALCOCO2-208ENST00000506971 TGP01266 2768 aa2.24□□□□□ -2.05
CALCOCO2-208ENST00000506971 LY6G6CO95867 125 aa2.23□□□□□ -2.05
CALCOCO2-208ENST00000506971 SPINK1P00995 79 aa2.23□□□□□ -2.05
CALCOCO2-208ENST00000506971 ACYP2P14621 99 aa2.23□□□□□ -2.05
CALCOCO2-208ENST00000506971 SPAG11AQ6PDA7 123 aa2.23□□□□□ -2.05
CALCOCO2-208ENST00000506971 PRR15LQ9BU68 103 aa2.23□□□□□ -2.05
CALCOCO2-208ENST00000506971 LINC01558Q9Y6Z2 57 aa2.23□□□□□ -2.05
CALCOCO2-208ENST00000506971 VPS13DQ5THJ4 4388 aa2.22□□□□□ -2.05
CALCOCO2-208ENST00000506971 DMAC1Q96GE9 116 aa2.22□□□□□ -2.05
CALCOCO2-208ENST00000506971 CHKB-CPT1BH3BT56 60 aa2.21□□□□□ -2.06
CALCOCO2-208ENST00000506971 Q5VV11 94 aa2.21□□□□□ -2.06
CALCOCO2-208ENST00000506971 SPINK6Q6UWN8 80 aa2.21□□□□□ -2.06
CALCOCO2-208ENST00000506971 CDC42SE1Q9NRR8 79 aa2.21□□□□□ -2.06
CALCOCO2-208ENST00000506971 PLECQ15149 4684 aaKnown RBP2.21□□□□□ -2.06
CALCOCO2-208ENST00000506971 DNAH10Q8IVF4 4471 aa2.21□□□□□ -2.06
CALCOCO2-208ENST00000506971 DNAH17Q9UFH2 4485 aa2.21□□□□□ -2.06
CALCOCO2-208ENST00000506971 TPRXLQ17RH7 258 aa2.2□□□□□ -2.06
CALCOCO2-208ENST00000506971 PCOTHQ58A44 107 aa2.2□□□□□ -2.06
CALCOCO2-208ENST00000506971 DNAH6Q9C0G6 4158 aa2.2□□□□□ -2.06
CALCOCO2-208ENST00000506971 PRKDCP78527 4128 aaKnown RBP2.19□□□□□ -2.06
CALCOCO2-208ENST00000506971 COL7A1Q02388 2944 aa2.18□□□□□ -2.06
CALCOCO2-208ENST00000506971 STARD9Q9P2P6 4700 aa2.18□□□□□ -2.06
CALCOCO2-208ENST00000506971 SPTSSBQ8NFR3 76 aa2.18□□□□□ -2.06
CALCOCO2-208ENST00000506971 DNAH7Q8WXX0 4024 aa2.17□□□□□ -2.06
CALCOCO2-208ENST00000506971 CSMD3Q7Z407 3707 aa2.17□□□□□ -2.06
CALCOCO2-208ENST00000506971 ALMS1Q8TCU4 4167 aa2.17□□□□□ -2.06
CALCOCO2-208ENST00000506971 LYSTQ99698 3801 aa2.16□□□□□ -2.06
CALCOCO2-208ENST00000506971 RYR2Q92736 4967 aa2.16□□□□□ -2.06
CALCOCO2-208ENST00000506971 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
CALCOCO2-208ENST00000506971 A0A1B0GU69 56 aa2.16□□□□□ -2.06
CALCOCO2-208ENST00000506971 LINC00304Q8N9R0 145 aa2.16□□□□□ -2.06
CALCOCO2-208ENST00000506971 DNAH8Q96JB1 4490 aa2.16□□□□□ -2.06
CALCOCO2-208ENST00000506971 TENM2Q9NT68 2774 aa2.15□□□□□ -2.06
CALCOCO2-208ENST00000506971 MUC2Q02817 5179 aa2.15□□□□□ -2.07
CALCOCO2-208ENST00000506971 DNAH2Q9P225 4427 aa2.15□□□□□ -2.07
CALCOCO2-208ENST00000506971 UQCR11O14957 56 aa2.14□□□□□ -2.07
CALCOCO2-208ENST00000506971 DNAH5Q8TE73 4624 aa2.12□□□□□ -2.07
CALCOCO2-208ENST00000506971 MEGF8Q7Z7M0 2845 aa2.12□□□□□ -2.07
CALCOCO2-208ENST00000506971 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
CALCOCO2-208ENST00000506971 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
CALCOCO2-208ENST00000506971 CSAG1Q6PB30 78 aa2.11□□□□□ -2.07
CALCOCO2-208ENST00000506971 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CALCOCO2-208ENST00000506971 HECTD4Q9Y4D8 3996 aa2.11□□□□□ -2.07
CALCOCO2-208ENST00000506971 HERC2O95714 4834 aa2.11□□□□□ -2.07
CALCOCO2-208ENST00000506971 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
CALCOCO2-208ENST00000506971 SPINK7P58062 85 aa2.1□□□□□ -2.07
CALCOCO2-208ENST00000506971 SRRM2Q9UQ35 2752 aaKnown RBP2.1□□□□□ -2.07
CALCOCO2-208ENST00000506971 KMT2AQ03164 3969 aa2.09□□□□□ -2.07
CALCOCO2-208ENST00000506971 FRAS1Q86XX4 4008 aa2.08□□□□□ -2.08
CALCOCO2-208ENST00000506971 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
CALCOCO2-208ENST00000506971 FAT2Q9NYQ8 4349 aa2.08□□□□□ -2.08
CALCOCO2-208ENST00000506971 PKD1P98161 4303 aa2.06□□□□□ -2.08
CALCOCO2-208ENST00000506971 KRTAP10-4P60372 401 aaPredicted RBP2.06□□□□□ -2.08
CALCOCO2-208ENST00000506971 COX6B2Q6YFQ2 88 aa2.06□□□□□ -2.08
CALCOCO2-208ENST00000506971 SACSQ9NZJ4 4579 aa2.05□□□□□ -2.08
CALCOCO2-208ENST00000506971 LRP1BQ9NZR2 4599 aa2.05□□□□□ -2.08
CALCOCO2-208ENST00000506971 INE1O15225 51 aa2.04□□□□□ -2.08
CALCOCO2-208ENST00000506971 HERC1Q15751 4861 aa2.03□□□□□ -2.08
CALCOCO2-208ENST00000506971 RPL37P61927 97 aaKnown RBP2.03□□□□□ -2.08
CALCOCO2-208ENST00000506971 PKHD1L1Q86WI1 4243 aa2.03□□□□□ -2.08
CALCOCO2-208ENST00000506971 VPS13BQ7Z7G8 4022 aa2.02□□□□□ -2.09
CALCOCO2-208ENST00000506971 C9orf92A6NGG3 77 aa2.02□□□□□ -2.09
CALCOCO2-208ENST00000506971 SMR3BP02814 79 aaPredicted RBP2.02□□□□□ -2.09
CALCOCO2-208ENST00000506971 H1FX-AS1Q4G0G2 97 aa2.02□□□□□ -2.09
CALCOCO2-208ENST00000506971 ABCA13Q86UQ4 5058 aa2.02□□□□□ -2.09
CALCOCO2-208ENST00000506971 APOBP04114 4563 aaKnown RBP2.01□□□□□ -2.09
CALCOCO2-208ENST00000506971 Q5VSD8 79 aa2□□□□□ -2.09
CALCOCO2-208ENST00000506971 DYNC1H1Q14204 4646 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-208ENST00000506971 FLG2Q5D862 2391 aaPredicted RBP1.99□□□□□ -2.09
CALCOCO2-208ENST00000506971 H0YAA0 97 aa1.98□□□□□ -2.09
CALCOCO2-208ENST00000506971 S4R3F8 94 aa1.98□□□□□ -2.09
CALCOCO2-208ENST00000506971 PKHD1P08F94 4074 aa1.97□□□□□ -2.09
CALCOCO2-208ENST00000506971 M0QZ58 72 aa1.94□□□□□ -2.1
CALCOCO2-208ENST00000506971 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
CALCOCO2-208ENST00000506971 FAT3Q8TDW7 4589 aa1.93□□□□□ -2.1
CALCOCO2-208ENST00000506971 FAT1Q14517 4588 aa1.93□□□□□ -2.1
CALCOCO2-208ENST00000506971 TNXBP22105 4242 aa1.93□□□□□ -2.1
CALCOCO2-208ENST00000506971 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms