RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 LYNX1G3V0Z9 82 aa0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 NDUFB1O75438 58 aa0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 WFDC9Q8NEX5 89 aa0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 DEFB104AQ8WTQ1 72 aa0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 S100A13Q99584 98 aa0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 ST20Q9HBF5 79 aa0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 RICTORQ6R327 1708 aa0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 CCDC180Q9P1Z9 1646 aa0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 ALS2Q96Q42 1657 aa0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 PARP4Q9UKK3 1724 aaKnown RBP0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 M0R2T5 61 aa0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 ADIRFQ15847 76 aa0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 HEPN1Q6WQI6 88 aa0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 CDKN2A-AS1Q9UH64 79 aa0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 ABCC6O95255 1503 aa0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 ABCA5Q8WWZ7 1642 aa0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 KRTAP19-2Q3LHN2 52 aa0.01□□□□□ -2.41
TOPBP1-204ENST00000505804 ABCC8Q09428 1581 aa0.01□□□□□ -2.41
TOPBP1-204ENST00000505804 ITSN1Q15811 1721 aa0.01□□□□□ -2.41
TOPBP1-204ENST00000505804 PLXNC1O60486 1568 aa0□□□□□ -2.41
TOPBP1-204ENST00000505804 ATP5EP2Q5VTU8 51 aa0□□□□□ -2.41
TOPBP1-204ENST00000505804 COX6B2Q6YFQ2 88 aa0□□□□□ -2.41
TOPBP1-204ENST00000505804 WFDC13Q8IUB5 93 aa0□□□□□ -2.41
TOPBP1-204ENST00000505804 KRTAP8-1Q8IUC2 63 aa0□□□□□ -2.41
TOPBP1-204ENST00000505804 MYO5CQ9NQX4 1742 aa0□□□□□ -2.41
TOPBP1-204ENST00000505804 TOGARAM1Q9Y4F4 1720 aa-0.01□□□□□ -2.41
TOPBP1-204ENST00000505804 H3BUT2 72 aa-0.01□□□□□ -2.41
TOPBP1-204ENST00000505804 IQGAP3Q86VI3 1631 aa-0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 TRPM2O94759 1503 aa-0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 ABCA10Q8WWZ4 1543 aa-0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 NDUFA3O95167 84 aa-0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 IFI6P09912 130 aa-0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 DEFB135Q30KP9 77 aa-0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 BVES-AS1Q5T3Y7 98 aa-0.02□□□□□ -2.41
TOPBP1-204ENST00000505804 UMAD1C9J7I0 102 aa-0.03□□□□□ -2.41
TOPBP1-204ENST00000505804 MT2AP02795 61 aa-0.03□□□□□ -2.41
TOPBP1-204ENST00000505804 MT1FP04733 61 aa-0.03□□□□□ -2.41
TOPBP1-204ENST00000505804 CDC42BPGQ6DT37 1551 aa-0.03□□□□□ -2.41
TOPBP1-204ENST00000505804 PRXQ9BXM0 1461 aa-0.03□□□□□ -2.41
TOPBP1-204ENST00000505804 CD163L1Q9NR16 1453 aa-0.03□□□□□ -2.41
TOPBP1-204ENST00000505804 MROH2AA6NES4 1674 aa-0.04□□□□□ -2.42
TOPBP1-204ENST00000505804 A0A087WXM4 84 aa-0.04□□□□□ -2.42
TOPBP1-204ENST00000505804 MT1BP07438 61 aa-0.04□□□□□ -2.42
TOPBP1-204ENST00000505804 SMIM13P0DJ93 91 aa-0.04□□□□□ -2.42
TOPBP1-204ENST00000505804 IFI27P40305 119 aaPredicted RBP-0.04□□□□□ -2.42
TOPBP1-204ENST00000505804 NREPQ16612 68 aa-0.04□□□□□ -2.42
TOPBP1-204ENST00000505804 TOP2AP11388 1531 aaKnown RBP-0.04□□□□□ -2.42
TOPBP1-204ENST00000505804 ANKARQ7Z5J8 1434 aa-0.04□□□□□ -2.42
TOPBP1-204ENST00000505804 DDX60Q8IY21 1712 aaKnown RBP-0.05□□□□□ -2.42
TOPBP1-204ENST00000505804 SYCP2Q9BX26 1530 aa-0.06□□□□□ -2.42
TOPBP1-204ENST00000505804 NDUFA4O00483 81 aa-0.06□□□□□ -2.42
TOPBP1-204ENST00000505804 C18orf32Q8TCD1 76 aa-0.06□□□□□ -2.42
TOPBP1-204ENST00000505804 FAM208AQ9UK61 1670 aaKnown RBP-0.06□□□□□ -2.42
TOPBP1-204ENST00000505804 DUOX1Q9NRD9 1551 aa-0.06□□□□□ -2.42
TOPBP1-204ENST00000505804 CDC42BPAQ5VT25 1732 aa-0.07□□□□□ -2.42
TOPBP1-204ENST00000505804 C3orf79P0CE67 100 aa-0.07□□□□□ -2.42
TOPBP1-204ENST00000505804 HMGA1P17096 107 aaKnown RBP-0.07□□□□□ -2.42
TOPBP1-204ENST00000505804 LINC00158P58513 81 aa-0.07□□□□□ -2.42
TOPBP1-204ENST00000505804 ABCA9Q8IUA7 1624 aa-0.07□□□□□ -2.42
TOPBP1-204ENST00000505804 H0YAA0 97 aa-0.08□□□□□ -2.42
TOPBP1-204ENST00000505804 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
TOPBP1-204ENST00000505804 KRTAP6-2Q3LI66 62 aa-0.08□□□□□ -2.42
TOPBP1-204ENST00000505804 H0YGG7 62 aa-0.09□□□□□ -2.42
TOPBP1-204ENST00000505804 STATHP02808 62 aa-0.09□□□□□ -2.42
TOPBP1-204ENST00000505804 ANKRD36CQ5JPF3 1778 aa-0.09□□□□□ -2.42
TOPBP1-204ENST00000505804 DEFA5Q01523 94 aa-0.1□□□□□ -2.43
TOPBP1-204ENST00000505804 TFF3Q07654 80 aa-0.1□□□□□ -2.43
TOPBP1-204ENST00000505804 DEFB131BA0A096LNP1 70 aa-0.11□□□□□ -2.43
TOPBP1-204ENST00000505804 KCNQ1DNQ9H478 68 aa-0.11□□□□□ -2.43
TOPBP1-204ENST00000505804 H3BVH4 76 aa-0.12□□□□□ -2.43
TOPBP1-204ENST00000505804 MRPL33O75394 65 aaKnown RBP-0.12□□□□□ -2.43
TOPBP1-204ENST00000505804 UBL5Q9BZL1 73 aa-0.12□□□□□ -2.43
TOPBP1-204ENST00000505804 MT1GP13640 62 aa-0.13□□□□□ -2.43
TOPBP1-204ENST00000505804 DEFB130BP0DP73 79 aa-0.14□□□□□ -2.43
TOPBP1-204ENST00000505804 DEFB130AP0DP74 79 aa-0.14□□□□□ -2.43
TOPBP1-204ENST00000505804 IAPPP10997 89 aa-0.14□□□□□ -2.43
TOPBP1-204ENST00000505804 KRTAP19-8Q3LI54 63 aa-0.14□□□□□ -2.43
TOPBP1-204ENST00000505804 KRTAP19-7Q3SYF9 63 aa-0.14□□□□□ -2.43
TOPBP1-204ENST00000505804 ENHOQ6UWT2 76 aa-0.14□□□□□ -2.43
TOPBP1-204ENST00000505804 MT1MQ8N339 61 aa-0.14□□□□□ -2.43
TOPBP1-204ENST00000505804 IQGAP2Q13576 1575 aa-0.15□□□□□ -2.43
TOPBP1-204ENST00000505804 SMCO4Q9NRQ5 59 aa-0.15□□□□□ -2.43
TOPBP1-204ENST00000505804 A0A1B0GUL6 1792 aa-0.15□□□□□ -2.43
TOPBP1-204ENST00000505804 ATXN8Q156A1 80 aa-0.16□□□□□ -2.44
TOPBP1-204ENST00000505804 HILPDAQ9Y5L2 63 aa-0.16□□□□□ -2.44
TOPBP1-204ENST00000505804 PDCD5O14737 125 aa-0.17□□□□□ -2.44
TOPBP1-204ENST00000505804 MT1EP04732 61 aa-0.17□□□□□ -2.44
TOPBP1-204ENST00000505804 CRIP1P50238 77 aa-0.17□□□□□ -2.44
TOPBP1-204ENST00000505804 PRLHP81277 87 aa-0.17□□□□□ -2.44
TOPBP1-204ENST00000505804 ETDCA0A1B0GVM5 59 aa-0.18□□□□□ -2.44
TOPBP1-204ENST00000505804 H3BNG1 76 aa-0.18□□□□□ -2.44
TOPBP1-204ENST00000505804 DEFB114Q30KQ6 69 aa-0.18□□□□□ -2.44
TOPBP1-204ENST00000505804 C9orf92A6NGG3 77 aa-0.19□□□□□ -2.44
TOPBP1-204ENST00000505804 DEFB106AQ8N104 65 aa-0.19□□□□□ -2.44
TOPBP1-204ENST00000505804 GNG13Q9P2W3 67 aa-0.19□□□□□ -2.44
TOPBP1-204ENST00000505804 DEFB108AA8MXU0 73 aa-0.2□□□□□ -2.44
TOPBP1-204ENST00000505804 S4R3F8 94 aa-0.2□□□□□ -2.44
TOPBP1-204ENST00000505804 MT1AP04731 61 aa-0.21□□□□□ -2.44
TOPBP1-204ENST00000505804 MT1XP80297 61 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms