RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 NWD1Q149M9 1564 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ANKRD36BQ8N2N9 1353 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 MON2Q7Z3U7 1717 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 ANKRD26Q9UPS8 1709 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC3O15438 1527 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 MAPKBP1O60336 1514 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 KDM5DQ9BY66 1539 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 DUOX2Q9NRD8 1548 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 WIZO95785 1651 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 SCN7AQ01118 1682 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 NHSQ6T4R5 1651 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 PREX1Q8TCU6 1659 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 ITSN2Q9NZM3 1697 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 FANCAO15360 1455 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCDC18Q5T9S5 1454 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 RNF17Q9BXT8 1623 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 A0A087WWC5 75 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 NAP1L6A6NFF2 107 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 SNAPC5O75971 98 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 CYB5AP00167 134 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 IFI27P40305 119 aaPredicted RBP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 RPL39P62891 51 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 PRCDQ00LT1 54 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 ACBD7Q8N6N7 88 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 C12orf57Q99622 126 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 VAMP8Q9BV40 100 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 MANBALQ9NQG1 85 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 DDX60LQ5H9U9 1706 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCNB3Q8WWL7 1395 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 NEXMIFQ5QGS0 1516 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 DCAF1Q9Y4B6 1507 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 CFAP43Q8NDM7 1665 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 MYOM2P54296 1465 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 PLEKHH2Q8IVE3 1493 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 NLRP1Q9C000 1473 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 MYO3AQ8NEV4 1616 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 CC2D2AQ9P2K1 1620 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 SNRPGP15A8MWD9 76 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 UMAD1C9J7I0 102 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 K7EIM0 57 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 M0R1W7 72 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 CORTO00230 105 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC5O15440 1437 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 MRPL33O75394 65 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 S100A10P60903 97 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 RPL38P63173 70 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 RPL39P5Q59GN2 51 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 EDC4Q6P2E9 1401 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 SVBPQ8N300 66 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 TMEM203Q969S6 136 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 RPL39LQ96EH5 51 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 ARHGAP5-AS1Q96IT6 56 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 TCEAL7Q9BRU2 100 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 PRO1854Q9UHT4 67 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 INO80Q9ULG1 1556 aaPredicted RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 Q9Y3F1 56 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 KIF1AQ12756 1690 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 FAM208AQ9UK61 1670 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC6O95255 1503 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC1P33527 1531 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 AGLP35573 1532 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 AKAP12Q02952 1782 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCDC88BA6NC98 1476 aa-0.35□□□□□ -2.46
HMGB1P29-201ENST00000505659 THOC2Q8NI27 1593 aaKnown RBP-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 A0A1B0GUT8 65 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 H3BVH4 76 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 ATOX1O00244 68 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 HMGN2P05204 90 aaKnown RBP-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 LINC00032P0C843 101 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 GNG4P50150 75 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 KRTDAPP60985 99 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 SNRPGP62308 76 aaKnown RBP-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 PEA15Q15121 130 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 RPL13AP3Q6NVV1 102 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 PMCHL2Q9BQD1 86 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 UBL5Q9BZL1 73 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 ST20Q9HBF5 79 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 TMEM167BQ9NRX6 74 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 CACFD1Q9UGQ2 172 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 IER3IP1Q9Y5U9 82 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 MROH2AA6NES4 1674 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 LMTK2Q8IWU2 1503 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 FAM135AQ9P2D6 1515 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 KIF14Q15058 1648 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 ABCA5Q8WWZ7 1642 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 MAP3K4Q9Y6R4 1608 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 PZPP20742 1482 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 DIP2BQ9P265 1576 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 C3P01024 1663 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 TOP2AP11388 1531 aaKnown RBP-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 MYMXA0A1B0GTQ4 84 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 PVALEFA0A1B0GWK0 134 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 EFCAB10A6NFE3 127 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 IGIPA6NJ69 53 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 H0YGX0 51 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 FAUP35544 74 aaKnown RBP-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 PKIAP61925 76 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 PPP3R1P63098 170 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 PMCHL1Q16048 86 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms