RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 NWD1Q149M9 1564 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 ANKRD36BQ8N2N9 1353 aa-0.32□□□□□ -2.46
HMGB1P29-201ENST00000505659 MON2Q7Z3U7 1717 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 ANKRD26Q9UPS8 1709 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC3O15438 1527 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 MAPKBP1O60336 1514 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 KDM5DQ9BY66 1539 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 DUOX2Q9NRD8 1548 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 WIZO95785 1651 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 SCN7AQ01118 1682 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 NHSQ6T4R5 1651 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 PREX1Q8TCU6 1659 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 ITSN2Q9NZM3 1697 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 FANCAO15360 1455 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCDC18Q5T9S5 1454 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 RNF17Q9BXT8 1623 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 A0A087WWC5 75 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 NAP1L6A6NFF2 107 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 SNAPC5O75971 98 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 CYB5AP00167 134 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 IFI27P40305 119 aaPredicted RBP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 RPL39P62891 51 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 PRCDQ00LT1 54 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 ACBD7Q8N6N7 88 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 C12orf57Q99622 126 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 VAMP8Q9BV40 100 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 MANBALQ9NQG1 85 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 DDX60LQ5H9U9 1706 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCNB3Q8WWL7 1395 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 NEXMIFQ5QGS0 1516 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 DCAF1Q9Y4B6 1507 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 CFAP43Q8NDM7 1665 aa-0.33□□□□□ -2.46
HMGB1P29-201ENST00000505659 MYOM2P54296 1465 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 PLEKHH2Q8IVE3 1493 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 NLRP1Q9C000 1473 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 MYO3AQ8NEV4 1616 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 CC2D2AQ9P2K1 1620 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 SNRPGP15A8MWD9 76 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 UMAD1C9J7I0 102 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 K7EIM0 57 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 M0R1W7 72 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 CORTO00230 105 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC5O15440 1437 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 MRPL33O75394 65 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 S100A10P60903 97 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 RPL38P63173 70 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 RPL39P5Q59GN2 51 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 EDC4Q6P2E9 1401 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 SVBPQ8N300 66 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 TMEM203Q969S6 136 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 RPL39LQ96EH5 51 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 ARHGAP5-AS1Q96IT6 56 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 TCEAL7Q9BRU2 100 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 PRO1854Q9UHT4 67 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 INO80Q9ULG1 1556 aaPredicted RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 Q9Y3F1 56 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 KIF1AQ12756 1690 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 FAM208AQ9UK61 1670 aaKnown RBP-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC6O95255 1503 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCC1P33527 1531 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 AGLP35573 1532 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 AKAP12Q02952 1782 aa-0.34□□□□□ -2.46
HMGB1P29-201ENST00000505659 CCDC88BA6NC98 1476 aa-0.35□□□□□ -2.46
HMGB1P29-201ENST00000505659 THOC2Q8NI27 1593 aaKnown RBP-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 A0A1B0GUT8 65 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 H3BVH4 76 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 ATOX1O00244 68 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 HMGN2P05204 90 aaKnown RBP-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 LINC00032P0C843 101 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 GNG4P50150 75 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 KRTDAPP60985 99 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 SNRPGP62308 76 aaKnown RBP-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 PEA15Q15121 130 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 RPL13AP3Q6NVV1 102 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 PMCHL2Q9BQD1 86 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 UBL5Q9BZL1 73 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 ST20Q9HBF5 79 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 TMEM167BQ9NRX6 74 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 CACFD1Q9UGQ2 172 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 IER3IP1Q9Y5U9 82 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 MROH2AA6NES4 1674 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 LMTK2Q8IWU2 1503 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 FAM135AQ9P2D6 1515 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 KIF14Q15058 1648 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 ABCA5Q8WWZ7 1642 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 MAP3K4Q9Y6R4 1608 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 PZPP20742 1482 aa-0.35□□□□□ -2.47
HMGB1P29-201ENST00000505659 DIP2BQ9P265 1576 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 C3P01024 1663 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 TOP2AP11388 1531 aaKnown RBP-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 MYMXA0A1B0GTQ4 84 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 PVALEFA0A1B0GWK0 134 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 EFCAB10A6NFE3 127 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 IGIPA6NJ69 53 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 H0YGX0 51 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 FAUP35544 74 aaKnown RBP-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 PKIAP61925 76 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 PPP3R1P63098 170 aa-0.36□□□□□ -2.47
HMGB1P29-201ENST00000505659 PMCHL1Q16048 86 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms