RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 RAB37Q96AX2 223 aa3.19□□□□□ -1.9
VCAN-206ENST00000505615 SEC11CQ9BY50 192 aa3.19□□□□□ -1.9
VCAN-206ENST00000505615 F8WEM9 126 aa3.18□□□□□ -1.9
VCAN-206ENST00000505615 IFITM1P13164 125 aa3.18□□□□□ -1.9
VCAN-206ENST00000505615 SVBPQ8N300 66 aa3.18□□□□□ -1.9
VCAN-206ENST00000505615 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
VCAN-206ENST00000505615 SERP1Q9Y6X1 66 aa3.17□□□□□ -1.9
VCAN-206ENST00000505615 A0A1B0GU33 70 aa3.16□□□□□ -1.9
VCAN-206ENST00000505615 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
VCAN-206ENST00000505615 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
VCAN-206ENST00000505615 TRACP01848 142 aa3.15□□□□□ -1.91
VCAN-206ENST00000505615 TRAV13-2A0A0B4J235 113 aa3.14□□□□□ -1.91
VCAN-206ENST00000505615 ZNF815PA8K554 130 aa3.14□□□□□ -1.91
VCAN-206ENST00000505615 Q5VV11 94 aa3.14□□□□□ -1.91
VCAN-206ENST00000505615 Q6ZQT0 140 aa3.14□□□□□ -1.91
VCAN-206ENST00000505615 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
VCAN-206ENST00000505615 hDV103S1A0JD37 113 aa3.13□□□□□ -1.91
VCAN-206ENST00000505615 COLCA2A8K830 154 aa3.13□□□□□ -1.91
VCAN-206ENST00000505615 PLNP26678 52 aa3.13□□□□□ -1.91
VCAN-206ENST00000505615 A0A1W2PNM2 257 aa3.12□□□□□ -1.91
VCAN-206ENST00000505615 SPRR2DP22532 72 aa3.12□□□□□ -1.91
VCAN-206ENST00000505615 PMCHL2Q9BQD1 86 aa3.12□□□□□ -1.91
VCAN-206ENST00000505615 C14orf132Q9NPU4 83 aa3.12□□□□□ -1.91
VCAN-206ENST00000505615 H3BUT2 72 aa3.11□□□□□ -1.91
VCAN-206ENST00000505615 SPINK7P58062 85 aa3.11□□□□□ -1.91
VCAN-206ENST00000505615 SPINT4Q6UDR6 99 aa3.11□□□□□ -1.91
VCAN-206ENST00000505615 Q6ZQY7 126 aa3.11□□□□□ -1.91
VCAN-206ENST00000505615 ROMO1P60602 79 aa3.1□□□□□ -1.91
VCAN-206ENST00000505615 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
VCAN-206ENST00000505615 WFDC13Q8IUB5 93 aa3.1□□□□□ -1.91
VCAN-206ENST00000505615 A0A087WSZ3 146 aa3.09□□□□□ -1.91
VCAN-206ENST00000505615 IGKCP01834 107 aa3.09□□□□□ -1.91
VCAN-206ENST00000505615 LINC00575Q6W349 94 aa3.09□□□□□ -1.91
VCAN-206ENST00000505615 SMIM11BQ8TCY0 68 aa3.09□□□□□ -1.91
VCAN-206ENST00000505615 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
VCAN-206ENST00000505615 BAALC-AS2P0C853 105 aa3.08□□□□□ -1.92
VCAN-206ENST00000505615 ZCCHC13Q8WW36 166 aaKnown RBP3.07□□□□□ -1.92
VCAN-206ENST00000505615 VAMP8Q9BV40 100 aa3.07□□□□□ -1.92
VCAN-206ENST00000505615 hADV29S1A0JD25 119 aa3.05□□□□□ -1.92
VCAN-206ENST00000505615 SNCGO76070 127 aa3.05□□□□□ -1.92
VCAN-206ENST00000505615 LEPROTL1O95214 131 aa3.05□□□□□ -1.92
VCAN-206ENST00000505615 H1FX-AS1Q4G0G2 97 aa3.05□□□□□ -1.92
VCAN-206ENST00000505615 PYY3Q5JQD4 70 aa3.05□□□□□ -1.92
VCAN-206ENST00000505615 IGKV4-1P06312 121 aa3.04□□□□□ -1.92
VCAN-206ENST00000505615 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.04□□□□□ -1.92
VCAN-206ENST00000505615 TMEM254Q8TBM7 123 aa3.04□□□□□ -1.92
VCAN-206ENST00000505615 PPDPFLQ8WWR9 84 aa3.04□□□□□ -1.92
VCAN-206ENST00000505615 CASC2Q6XLA1 102 aa3.03□□□□□ -1.92
VCAN-206ENST00000505615 R4GN34 69 aa3.03□□□□□ -1.92
VCAN-206ENST00000505615 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
VCAN-206ENST00000505615 DSCR8Q96T75 97 aa3.01□□□□□ -1.93
VCAN-206ENST00000505615 ATP5EP56381 51 aaPredicted RBP3□□□□□ -1.93
VCAN-206ENST00000505615 MUSTN1Q8IVN3 82 aa3□□□□□ -1.93
VCAN-206ENST00000505615 LINC00472Q9H8W2 130 aa3□□□□□ -1.93
VCAN-206ENST00000505615 MT-ATP8P03928 68 aa2.99□□□□□ -1.93
VCAN-206ENST00000505615 COX7CP15954 63 aa2.99□□□□□ -1.93
VCAN-206ENST00000505615 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
VCAN-206ENST00000505615 Q8N9L7 120 aa2.98□□□□□ -1.93
VCAN-206ENST00000505615 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
VCAN-206ENST00000505615 C3orf79P0CE67 100 aa2.96□□□□□ -1.94
VCAN-206ENST00000505615 MIR22HGQ0VDD5 57 aa2.96□□□□□ -1.94
VCAN-206ENST00000505615 SYS1-DBNDD2H3BUS1 97 aa2.95□□□□□ -1.94
VCAN-206ENST00000505615 RBM3P98179 157 aaKnown RBP2.94□□□□□ -1.94
VCAN-206ENST00000505615 PRO2289Q9P1D8 64 aa2.94□□□□□ -1.94
VCAN-206ENST00000505615 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
VCAN-206ENST00000505615 TRBV7-4A0A0J9YYF1 115 aa2.93□□□□□ -1.94
VCAN-206ENST00000505615 MT1XP80297 61 aa2.93□□□□□ -1.94
VCAN-206ENST00000505615 KLKP1Q107X0 134 aa2.93□□□□□ -1.94
VCAN-206ENST00000505615 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
VCAN-206ENST00000505615 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
VCAN-206ENST00000505615 IGKV3D-7A0A0C4DH55 119 aa2.91□□□□□ -1.94
VCAN-206ENST00000505615 Q1T7F1 81 aa2.91□□□□□ -1.94
VCAN-206ENST00000505615 BVES-AS1Q5T3Y7 98 aa2.91□□□□□ -1.94
VCAN-206ENST00000505615 F8W1H4 67 aa2.9□□□□□ -1.95
VCAN-206ENST00000505615 K7EP34 96 aa2.9□□□□□ -1.95
VCAN-206ENST00000505615 P0C880 135 aa2.9□□□□□ -1.95
VCAN-206ENST00000505615 KRTDAPP60985 99 aa2.9□□□□□ -1.95
VCAN-206ENST00000505615 CCKP06307 115 aa2.89□□□□□ -1.95
VCAN-206ENST00000505615 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
VCAN-206ENST00000505615 ATOX1O00244 68 aa2.88□□□□□ -1.95
VCAN-206ENST00000505615 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
VCAN-206ENST00000505615 APOC3P02656 99 aa2.87□□□□□ -1.95
VCAN-206ENST00000505615 SPTSSBQ8NFR3 76 aa2.86□□□□□ -1.95
VCAN-206ENST00000505615 CYP4F30PQ9H0H9 118 aa2.85□□□□□ -1.95
VCAN-206ENST00000505615 CSAG1Q6PB30 78 aa2.84□□□□□ -1.95
VCAN-206ENST00000505615 ORMDL1Q9P0S3 153 aa2.84□□□□□ -1.95
VCAN-206ENST00000505615 UQCR10Q9UDW1 63 aa2.84□□□□□ -1.95
VCAN-206ENST00000505615 HCG22E2RYF7 251 aa2.83□□□□□ -1.96
VCAN-206ENST00000505615 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
VCAN-206ENST00000505615 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
VCAN-206ENST00000505615 S4R3F8 94 aa2.83□□□□□ -1.96
VCAN-206ENST00000505615 H0YGX0 51 aa2.82□□□□□ -1.96
VCAN-206ENST00000505615 CRIPTQ9P021 101 aa2.82□□□□□ -1.96
VCAN-206ENST00000505615 NDUFC1O43677 76 aa2.81□□□□□ -1.96
VCAN-206ENST00000505615 CDC42SE1Q9NRR8 79 aa2.81□□□□□ -1.96
VCAN-206ENST00000505615 NDUFB1O75438 58 aa2.8□□□□□ -1.96
VCAN-206ENST00000505615 SERP2Q8N6R1 65 aa2.8□□□□□ -1.96
VCAN-206ENST00000505615 DMAC1Q96GE9 116 aa2.79□□□□□ -1.96
VCAN-206ENST00000505615 MMP24-AS1A0A0U1RRL7 71 aa2.77□□□□□ -1.97
VCAN-206ENST00000505615 MT4P47944 62 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms