RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 ANK2Q01484 3957 aa3.21□□□□□ -1.9
SYNPO2-205ENST00000504178 FRAS1Q86XX4 4008 aa3.18□□□□□ -1.9
SYNPO2-205ENST00000504178 KRTAP3-3Q9BYR6 98 aa3.18□□□□□ -1.9
SYNPO2-205ENST00000504178 KRTAP3-2Q9BYR7 98 aa3.17□□□□□ -1.9
SYNPO2-205ENST00000504178 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
SYNPO2-205ENST00000504178 INE1O15225 51 aa3.14□□□□□ -1.91
SYNPO2-205ENST00000504178 PRKDCP78527 4128 aaKnown RBP3.13□□□□□ -1.91
SYNPO2-205ENST00000504178 DNAH9Q9NYC9 4486 aa3.13□□□□□ -1.91
SYNPO2-205ENST00000504178 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
SYNPO2-205ENST00000504178 DNAH10Q8IVF4 4471 aa3.11□□□□□ -1.91
SYNPO2-205ENST00000504178 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
SYNPO2-205ENST00000504178 FBN3Q75N90 2809 aa3.1□□□□□ -1.91
SYNPO2-205ENST00000504178 DNAH7Q8WXX0 4024 aa3.1□□□□□ -1.91
SYNPO2-205ENST00000504178 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
SYNPO2-205ENST00000504178 LORP23490 312 aaPredicted RBP3.03□□□□□ -1.92
SYNPO2-205ENST00000504178 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
SYNPO2-205ENST00000504178 VPS13BQ7Z7G8 4022 aa3.01□□□□□ -1.93
SYNPO2-205ENST00000504178 DNAH1Q9P2D7 4330 aa3.01□□□□□ -1.93
SYNPO2-205ENST00000504178 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
SYNPO2-205ENST00000504178 DNAH2Q9P225 4427 aa2.97□□□□□ -1.93
SYNPO2-205ENST00000504178 STARD9Q9P2P6 4700 aa2.96□□□□□ -1.93
SYNPO2-205ENST00000504178 DNAH3Q8TD57 4116 aa2.96□□□□□ -1.94
SYNPO2-205ENST00000504178 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
SYNPO2-205ENST00000504178 PLECQ15149 4684 aaKnown RBP2.95□□□□□ -1.94
SYNPO2-205ENST00000504178 VPS13DQ5THJ4 4388 aa2.93□□□□□ -1.94
SYNPO2-205ENST00000504178 MT1HP80294 61 aa2.92□□□□□ -1.94
SYNPO2-205ENST00000504178 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.95
SYNPO2-205ENST00000504178 FAT2Q9NYQ8 4349 aa2.88□□□□□ -1.95
SYNPO2-205ENST00000504178 DNHD1Q96M86 4753 aa2.87□□□□□ -1.95
SYNPO2-205ENST00000504178 DNAH11Q96DT5 4516 aa2.86□□□□□ -1.95
SYNPO2-205ENST00000504178 PKHD1P08F94 4074 aa2.85□□□□□ -1.95
SYNPO2-205ENST00000504178 MT2AP02795 61 aa2.84□□□□□ -1.95
SYNPO2-205ENST00000504178 DNAH17Q9UFH2 4485 aa2.83□□□□□ -1.96
SYNPO2-205ENST00000504178 HECTD4Q9Y4D8 3996 aa2.83□□□□□ -1.96
SYNPO2-205ENST00000504178 DNAH5Q8TE73 4624 aa2.82□□□□□ -1.96
SYNPO2-205ENST00000504178 DYNC2H1Q8NCM8 4307 aaKnown RBP2.82□□□□□ -1.96
SYNPO2-205ENST00000504178 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
SYNPO2-205ENST00000504178 SPRR2FQ96RM1 72 aa2.8□□□□□ -1.96
SYNPO2-205ENST00000504178 LRP1BQ9NZR2 4599 aa2.8□□□□□ -1.96
SYNPO2-205ENST00000504178 KRTAP17-1Q9BYP8 105 aa2.79□□□□□ -1.96
SYNPO2-205ENST00000504178 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
SYNPO2-205ENST00000504178 MT1FP04733 61 aa2.78□□□□□ -1.96
SYNPO2-205ENST00000504178 DNAH8Q96JB1 4490 aa2.78□□□□□ -1.96
SYNPO2-205ENST00000504178 LPAP08519 4548 aa2.77□□□□□ -1.97
SYNPO2-205ENST00000504178 FAT1Q14517 4588 aa2.76□□□□□ -1.97
SYNPO2-205ENST00000504178 DYNC1H1Q14204 4646 aaKnown RBP2.74□□□□□ -1.97
SYNPO2-205ENST00000504178 FAT3Q8TDW7 4589 aa2.73□□□□□ -1.97
SYNPO2-205ENST00000504178 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
SYNPO2-205ENST00000504178 SACSQ9NZJ4 4579 aa2.73□□□□□ -1.97
SYNPO2-205ENST00000504178 HERC1Q15751 4861 aa2.73□□□□□ -1.97
SYNPO2-205ENST00000504178 HSPG2P98160 4391 aa2.72□□□□□ -1.97
SYNPO2-205ENST00000504178 SPRR2EP22531 72 aa2.68□□□□□ -1.98
SYNPO2-205ENST00000504178 SPRR2BP35325 72 aa2.68□□□□□ -1.98
SYNPO2-205ENST00000504178 SPRR2AP35326 72 aa2.68□□□□□ -1.98
SYNPO2-205ENST00000504178 MYCBP2O75592 4640 aa2.66□□□□□ -1.98
SYNPO2-205ENST00000504178 HYDINQ4G0P3 5121 aa2.66□□□□□ -1.98
SYNPO2-205ENST00000504178 LRP1Q07954 4544 aaKnown RBP2.63□□□□□ -1.99
SYNPO2-205ENST00000504178 BIRC6Q9NR09 4857 aa2.62□□□□□ -1.99
SYNPO2-205ENST00000504178 KRTAP19-4Q3LI73 84 aa2.61□□□□□ -1.99
SYNPO2-205ENST00000504178 SPRR2DP22532 72 aa2.6□□□□□ -1.99
SYNPO2-205ENST00000504178 PKD1P98161 4303 aa2.58□□□□□ -2
SYNPO2-205ENST00000504178 KRTAP19-8Q3LI54 63 aa2.58□□□□□ -2
SYNPO2-205ENST00000504178 APOBP04114 4563 aaKnown RBP2.58□□□□□ -2
SYNPO2-205ENST00000504178 PKHD1L1Q86WI1 4243 aa2.58□□□□□ -2
SYNPO2-205ENST00000504178 LCE3BQ5TA77 95 aa2.57□□□□□ -2
SYNPO2-205ENST00000504178 RYR1P21817 5038 aa2.56□□□□□ -2
SYNPO2-205ENST00000504178 LCE2BO14633 110 aa2.55□□□□□ -2
SYNPO2-205ENST00000504178 TNXBP22105 4242 aa2.54□□□□□ -2
SYNPO2-205ENST00000504178 MT1GP13640 62 aa2.54□□□□□ -2
SYNPO2-205ENST00000504178 MT1XP80297 61 aa2.54□□□□□ -2
SYNPO2-205ENST00000504178 PCLOQ9Y6V0 5065 aa2.53□□□□□ -2
SYNPO2-205ENST00000504178 KRTAP19-1Q8IUB9 90 aa2.53□□□□□ -2
SYNPO2-205ENST00000504178 RYR2Q92736 4967 aa2.52□□□□□ -2.01
SYNPO2-205ENST00000504178 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
SYNPO2-205ENST00000504178 RYR3Q15413 4870 aa2.5□□□□□ -2.01
SYNPO2-205ENST00000504178 MT1BP07438 61 aa2.5□□□□□ -2.01
SYNPO2-205ENST00000504178 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
SYNPO2-205ENST00000504178 KRTAP9-8Q9BYQ0 159 aa2.47□□□□□ -2.01
SYNPO2-205ENST00000504178 KMT2CQ8NEZ4 4911 aaKnown RBP2.47□□□□□ -2.01
SYNPO2-205ENST00000504178 KRTAP4-8A0A0G2JLE6 195 aa2.45□□□□□ -2.02
SYNPO2-205ENST00000504178 KRTAP4-8Q9BYQ9 185 aa2.45□□□□□ -2.02
SYNPO2-205ENST00000504178 KRTAP9-3Q9BYQ3 159 aa2.44□□□□□ -2.02
SYNPO2-205ENST00000504178 MUC17Q685J3 4493 aa2.41□□□□□ -2.02
SYNPO2-205ENST00000504178 LCE2CQ5TA81 110 aa2.4□□□□□ -2.03
SYNPO2-205ENST00000504178 LRP2P98164 4655 aa2.39□□□□□ -2.03
SYNPO2-205ENST00000504178 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
SYNPO2-205ENST00000504178 KRTAP9-2Q9BYQ4 174 aa2.38□□□□□ -2.03
SYNPO2-205ENST00000504178 HERC2O95714 4834 aa2.37□□□□□ -2.03
SYNPO2-205ENST00000504178 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
SYNPO2-205ENST00000504178 LCE2DQ5TA82 110 aaPredicted RBP2.35□□□□□ -2.03
SYNPO2-205ENST00000504178 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
SYNPO2-205ENST00000504178 MT1LQ93083 61 aa2.32□□□□□ -2.04
SYNPO2-205ENST00000504178 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
SYNPO2-205ENST00000504178 MT1EP04732 61 aa2.3□□□□□ -2.04
SYNPO2-205ENST00000504178 EPPK1P58107 5090 aaKnown RBP2.29□□□□□ -2.04
SYNPO2-205ENST00000504178 KIAA1109Q2LD37 5005 aa2.29□□□□□ -2.04
SYNPO2-205ENST00000504178 MT4P47944 62 aa2.29□□□□□ -2.04
SYNPO2-205ENST00000504178 FLGP20930 4061 aaPredicted RBP2.28□□□□□ -2.04
SYNPO2-205ENST00000504178 FSIP2Q5CZC0 6907 aa2.28□□□□□ -2.04
SYNPO2-205ENST00000504178 KRTAP9-6A0A140TA67 174 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms