RNA–Protein interactions for RNA: ENST00000503509.1

SERF1A-203, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2

Gene SERF1A, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-203ENST00000503509 KALRNO60229 2985 aa-0.21□□□□□ -2.44
SERF1A-203ENST00000503509 NBPF19A0A087WUL8 3843 aa-0.21□□□□□ -2.44
SERF1A-203ENST00000503509 CLPSL2Q6UWE3 100 aa-0.21□□□□□ -2.44
SERF1A-203ENST00000503509 KRTAP8-1Q8IUC2 63 aa-0.21□□□□□ -2.44
SERF1A-203ENST00000503509 MTORP42345 2549 aa-0.21□□□□□ -2.44
SERF1A-203ENST00000503509 STAB2Q8WWQ8 2551 aa-0.21□□□□□ -2.44
SERF1A-203ENST00000503509 HIVEP1P15822 2718 aa-0.22□□□□□ -2.44
SERF1A-203ENST00000503509 WDR87Q6ZQQ6 2873 aa-0.22□□□□□ -2.44
SERF1A-203ENST00000503509 PLECQ15149 4684 aaKnown RBP-0.23□□□□□ -2.45
SERF1A-203ENST00000503509 A0A0C4DFX4 3053 aa-0.23□□□□□ -2.45
SERF1A-203ENST00000503509 LAMA1P25391 3075 aa-0.23□□□□□ -2.45
SERF1A-203ENST00000503509 FASNP49327 2511 aaKnown RBP-0.23□□□□□ -2.45
SERF1A-203ENST00000503509 UTP20O75691 2785 aaKnown RBP-0.23□□□□□ -2.45
SERF1A-203ENST00000503509 MXRA5Q9NR99 2828 aa-0.24□□□□□ -2.45
SERF1A-203ENST00000503509 ATP7AQ04656 1500 aa-0.24□□□□□ -2.45
SERF1A-203ENST00000503509 DYNC1H1Q14204 4646 aaKnown RBP-0.25□□□□□ -2.45
SERF1A-203ENST00000503509 HYDINQ4G0P3 5121 aa-0.25□□□□□ -2.45
SERF1A-203ENST00000503509 SPENQ96T58 3664 aaKnown RBP-0.25□□□□□ -2.45
SERF1A-203ENST00000503509 NDUFA1O15239 70 aa-0.25□□□□□ -2.45
SERF1A-203ENST00000503509 RYR3Q15413 4870 aa-0.25□□□□□ -2.45
SERF1A-203ENST00000503509 ACACBO00763 2458 aa-0.25□□□□□ -2.45
SERF1A-203ENST00000503509 EPG5Q9HCE0 2579 aa-0.25□□□□□ -2.45
SERF1A-203ENST00000503509 DNAH10Q8IVF4 4471 aa-0.25□□□□□ -2.45
SERF1A-203ENST00000503509 UBR4Q5T4S7 5183 aa-0.26□□□□□ -2.45
SERF1A-203ENST00000503509 DNAH7Q8WXX0 4024 aa-0.26□□□□□ -2.45
SERF1A-203ENST00000503509 RYR1P21817 5038 aa-0.26□□□□□ -2.45
SERF1A-203ENST00000503509 SMR3BP02814 79 aaPredicted RBP-0.26□□□□□ -2.45
SERF1A-203ENST00000503509 SPG11Q96JI7 2443 aa-0.26□□□□□ -2.45
SERF1A-203ENST00000503509 NEBP20929 6669 aa-0.27□□□□□ -2.45
SERF1A-203ENST00000503509 POLR2KP53803 58 aaKnown RBP-0.27□□□□□ -2.45
SERF1A-203ENST00000503509 DEFB1P60022 68 aa-0.27□□□□□ -2.45
SERF1A-203ENST00000503509 USH2AO75445 5202 aa-0.27□□□□□ -2.45
SERF1A-203ENST00000503509 EPPK1P58107 5090 aaKnown RBP-0.28□□□□□ -2.45
SERF1A-203ENST00000503509 NBEAQ8NFP9 2946 aa-0.28□□□□□ -2.45
SERF1A-203ENST00000503509 TOMM5Q8N4H5 51 aa-0.28□□□□□ -2.45
SERF1A-203ENST00000503509 KIAA1109Q2LD37 5005 aa-0.28□□□□□ -2.45
SERF1A-203ENST00000503509 MGAM2Q2M2H8 2515 aa-0.28□□□□□ -2.45
SERF1A-203ENST00000503509 LRRK2Q5S007 2527 aa-0.29□□□□□ -2.46
SERF1A-203ENST00000503509 BIRC6Q9NR09 4857 aa-0.29□□□□□ -2.46
SERF1A-203ENST00000503509 MYO18BQ8IUG5 2567 aa-0.29□□□□□ -2.46
SERF1A-203ENST00000503509 NBEAL2Q6ZNJ1 2754 aa-0.29□□□□□ -2.46
SERF1A-203ENST00000503509 ACACAQ13085 2346 aa-0.3□□□□□ -2.46
SERF1A-203ENST00000503509 MT1HP80294 61 aa-0.3□□□□□ -2.46
SERF1A-203ENST00000503509 RYR2Q92736 4967 aa-0.32□□□□□ -2.46
SERF1A-203ENST00000503509 SAMD9LQ8IVG5 1584 aa-0.32□□□□□ -2.46
SERF1A-203ENST00000503509 KRTAP20-2Q3LI61 65 aa-0.32□□□□□ -2.46
SERF1A-203ENST00000503509 USP9YO00507 2555 aaPredicted RBP-0.32□□□□□ -2.46
SERF1A-203ENST00000503509 CELSR3Q9NYQ7 3312 aa-0.32□□□□□ -2.46
SERF1A-203ENST00000503509 DOPEY1Q5JWR5 2465 aa-0.33□□□□□ -2.46
SERF1A-203ENST00000503509 SPART-AS1P0CW21 52 aa-0.33□□□□□ -2.46
SERF1A-203ENST00000503509 DNAH17Q9UFH2 4485 aa-0.33□□□□□ -2.46
SERF1A-203ENST00000503509 RELNP78509 3460 aa-0.33□□□□□ -2.46
SERF1A-203ENST00000503509 CMYA5Q8N3K9 4069 aa-0.33□□□□□ -2.46
SERF1A-203ENST00000503509 SPTBN5Q9NRC6 3674 aaKnown RBP-0.34□□□□□ -2.46
SERF1A-203ENST00000503509 NIPBLQ6KC79 2804 aaeCLIP-0.34□□□□□ -2.46
SERF1A-203ENST00000503509 FAM186AA6NE01 2351 aa-0.34□□□□□ -2.46
SERF1A-203ENST00000503509 DNHD1Q96M86 4753 aa-0.35□□□□□ -2.46
SERF1A-203ENST00000503509 ITPR3Q14573 2671 aa-0.35□□□□□ -2.47
SERF1A-203ENST00000503509 RNF213Q63HN8 5207 aa-0.36□□□□□ -2.47
SERF1A-203ENST00000503509 ITPR1Q14643 2758 aa-0.36□□□□□ -2.47
SERF1A-203ENST00000503509 TLN2Q9Y4G6 2542 aa-0.36□□□□□ -2.47
SERF1A-203ENST00000503509 MT4P47944 62 aa-0.36□□□□□ -2.47
SERF1A-203ENST00000503509 RIF1Q5UIP0 2472 aaKnown RBP-0.36□□□□□ -2.47
SERF1A-203ENST00000503509 COL12A1Q99715 3063 aa-0.36□□□□□ -2.47
SERF1A-203ENST00000503509 TOP2AP11388 1531 aaKnown RBP-0.37□□□□□ -2.47
SERF1A-203ENST00000503509 FRYQ5TBA9 3013 aa-0.37□□□□□ -2.47
SERF1A-203ENST00000503509 LAMA3Q16787 3333 aa-0.37□□□□□ -2.47
SERF1A-203ENST00000503509 COL6A5A8TX70 2615 aa-0.38□□□□□ -2.47
SERF1A-203ENST00000503509 C5orf42Q9H799 3197 aa-0.39□□□□□ -2.47
SERF1A-203ENST00000503509 TEX15Q9BXT5 2789 aa-0.4□□□□□ -2.47
SERF1A-203ENST00000503509 LAMA2P24043 3122 aaKnown RBP-0.4□□□□□ -2.47
SERF1A-203ENST00000503509 MGAQ8IWI9 3026 aa-0.4□□□□□ -2.47
SERF1A-203ENST00000503509 DNAH5Q8TE73 4624 aa-0.4□□□□□ -2.47
SERF1A-203ENST00000503509 MT1EP04732 61 aa-0.41□□□□□ -2.48
SERF1A-203ENST00000503509 CCDC168Q8NDH2 2452 aa-0.42□□□□□ -2.48
SERF1A-203ENST00000503509 LEAP2Q969E1 77 aa-0.42□□□□□ -2.48
SERF1A-203ENST00000503509 CHD7Q9P2D1 2997 aa-0.42□□□□□ -2.48
SERF1A-203ENST00000503509 CRYBG3Q68DQ2 2970 aa-0.42□□□□□ -2.48
SERF1A-203ENST00000503509 USP9XQ93008 2570 aaPredicted RBP-0.43□□□□□ -2.48
SERF1A-203ENST00000503509 CSMD1Q96PZ7 3565 aa-0.43□□□□□ -2.48
SERF1A-203ENST00000503509 MT1XP80297 61 aa-0.43□□□□□ -2.48
SERF1A-203ENST00000503509 TRRAPQ9Y4A5 3859 aa-0.43□□□□□ -2.48
SERF1A-203ENST00000503509 ABCA13Q86UQ4 5058 aa-0.44□□□□□ -2.48
SERF1A-203ENST00000503509 MT1LQ93083 61 aa-0.46□□□□□ -2.48
SERF1A-203ENST00000503509 MROH2BQ7Z745 1585 aa-0.46□□□□□ -2.48
SERF1A-203ENST00000503509 DUOX1Q9NRD9 1551 aa-0.46□□□□□ -2.48
SERF1A-203ENST00000503509 ZFHX4Q86UP3 3567 aa-0.46□□□□□ -2.48
SERF1A-203ENST00000503509 RPL39P62891 51 aaKnown RBP-0.47□□□□□ -2.48
SERF1A-203ENST00000503509 TOMM7Q9P0U1 55 aa-0.48□□□□□ -2.49
SERF1A-203ENST00000503509 ADGRG4Q8IZF6 3080 aa-0.51□□□□□ -2.49
SERF1A-203ENST00000503509 DEFB136Q30KP8 78 aa-0.51□□□□□ -2.49
SERF1A-203ENST00000503509 CEP295Q9C0D2 2601 aa-0.51□□□□□ -2.49
SERF1A-203ENST00000503509 SRCAPQ6ZRS2 3230 aa-0.52□□□□□ -2.49
SERF1A-203ENST00000503509 CFAP46Q8IYW2 2715 aa-0.52□□□□□ -2.49
SERF1A-203ENST00000503509 SPTAN1Q13813 2472 aaKnown RBP-0.52□□□□□ -2.49
SERF1A-203ENST00000503509 SMG1Q96Q15 3661 aaKnown RBP-0.52□□□□□ -2.49
SERF1A-203ENST00000503509 RPL39LQ96EH5 51 aaKnown RBP-0.53□□□□□ -2.49
SERF1A-203ENST00000503509 DEFB4AO15263 64 aa-0.56□□□□□ -2.5
SERF1A-203ENST00000503509 LINC01590Q5TEZ4 76 aa-0.56□□□□□ -2.5
SERF1A-203ENST00000503509 EYSQ5T1H1 3165 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms