RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 LOC101927531A0A1B0GV80 90 aa2.72□□□□□ -1.97
NEDD4-203ENST00000502612 VPS13DQ5THJ4 4388 aa2.72□□□□□ -1.97
NEDD4-203ENST00000502612 MEGF8Q7Z7M0 2845 aa2.71□□□□□ -1.98
NEDD4-203ENST00000502612 LINC00313P59037 77 aa2.71□□□□□ -1.98
NEDD4-203ENST00000502612 COL7A1Q02388 2944 aa2.71□□□□□ -1.98
NEDD4-203ENST00000502612 PLECQ15149 4684 aaKnown RBP2.7□□□□□ -1.98
NEDD4-203ENST00000502612 DNAH7Q8WXX0 4024 aa2.69□□□□□ -1.98
NEDD4-203ENST00000502612 C1orf195Q5TG92 126 aa2.69□□□□□ -1.98
NEDD4-203ENST00000502612 C20orf166-AS1Q96NR2 134 aa2.69□□□□□ -1.98
NEDD4-203ENST00000502612 PRKDCP78527 4128 aaKnown RBP2.69□□□□□ -1.98
NEDD4-203ENST00000502612 CSMD3Q7Z407 3707 aa2.69□□□□□ -1.98
NEDD4-203ENST00000502612 ALMS1Q8TCU4 4167 aa2.68□□□□□ -1.98
NEDD4-203ENST00000502612 DNAH10Q8IVF4 4471 aa2.68□□□□□ -1.98
NEDD4-203ENST00000502612 TGP01266 2768 aa2.67□□□□□ -1.98
NEDD4-203ENST00000502612 STARD9Q9P2P6 4700 aa2.67□□□□□ -1.98
NEDD4-203ENST00000502612 LYSTQ99698 3801 aa2.66□□□□□ -1.98
NEDD4-203ENST00000502612 DNAH6Q9C0G6 4158 aa2.66□□□□□ -1.98
NEDD4-203ENST00000502612 Q1T7F1 81 aa2.65□□□□□ -1.99
NEDD4-203ENST00000502612 DNAH17Q9UFH2 4485 aa2.65□□□□□ -1.99
NEDD4-203ENST00000502612 DNAH2Q9P225 4427 aa2.65□□□□□ -1.99
NEDD4-203ENST00000502612 ACYP2P14621 99 aa2.64□□□□□ -1.99
NEDD4-203ENST00000502612 TENM2Q9NT68 2774 aa2.64□□□□□ -1.99
NEDD4-203ENST00000502612 SMR3BP02814 79 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-203ENST00000502612 C4orf26Q17RF5 130 aa2.63□□□□□ -1.99
NEDD4-203ENST00000502612 PCOTHQ58A44 107 aa2.63□□□□□ -1.99
NEDD4-203ENST00000502612 FP248Q71RG6 208 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-203ENST00000502612 CHKB-CPT1BH3BT56 60 aa2.62□□□□□ -1.99
NEDD4-203ENST00000502612 COA5Q86WW8 74 aa2.62□□□□□ -1.99
NEDD4-203ENST00000502612 DNAH8Q96JB1 4490 aa2.6□□□□□ -1.99
NEDD4-203ENST00000502612 A8MUN3 132 aa2.6□□□□□ -1.99
NEDD4-203ENST00000502612 C7orf65Q6ZTY9 151 aa2.6□□□□□ -1.99
NEDD4-203ENST00000502612 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
NEDD4-203ENST00000502612 SPTSSBQ8NFR3 76 aa2.59□□□□□ -1.99
NEDD4-203ENST00000502612 DMAC1Q96GE9 116 aa2.59□□□□□ -1.99
NEDD4-203ENST00000502612 PRR15LQ9BU68 103 aa2.59□□□□□ -1.99
NEDD4-203ENST00000502612 KMT2AQ03164 3969 aa2.59□□□□□ -2
NEDD4-203ENST00000502612 HECTD4Q9Y4D8 3996 aa2.59□□□□□ -2
NEDD4-203ENST00000502612 KRTAP10-4P60372 401 aaPredicted RBP2.58□□□□□ -2
NEDD4-203ENST00000502612 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
NEDD4-203ENST00000502612 BRK1Q8WUW1 75 aa2.57□□□□□ -2
NEDD4-203ENST00000502612 LINC01558Q9Y6Z2 57 aa2.57□□□□□ -2
NEDD4-203ENST00000502612 FAT2Q9NYQ8 4349 aa2.56□□□□□ -2
NEDD4-203ENST00000502612 Q5VSD8 79 aa2.56□□□□□ -2
NEDD4-203ENST00000502612 RETNLBQ9BQ08 111 aa2.56□□□□□ -2
NEDD4-203ENST00000502612 PKD1P98161 4303 aa2.56□□□□□ -2
NEDD4-203ENST00000502612 DNAH11Q96DT5 4516 aa2.56□□□□□ -2
NEDD4-203ENST00000502612 DNAH5Q8TE73 4624 aa2.56□□□□□ -2
NEDD4-203ENST00000502612 FRAS1Q86XX4 4008 aa2.55□□□□□ -2
NEDD4-203ENST00000502612 ATP11AUNQ6ZP68 121 aa2.54□□□□□ -2
NEDD4-203ENST00000502612 SRRM2Q9UQ35 2752 aaKnown RBP2.54□□□□□ -2
NEDD4-203ENST00000502612 A0A1B0GU69 56 aa2.53□□□□□ -2
NEDD4-203ENST00000502612 C9orf92A6NGG3 77 aa2.53□□□□□ -2
NEDD4-203ENST00000502612 KRTAP12-1P59990 96 aa2.53□□□□□ -2
NEDD4-203ENST00000502612 Q5VV11 94 aa2.53□□□□□ -2
NEDD4-203ENST00000502612 HYDINQ4G0P3 5121 aa2.53□□□□□ -2.01
NEDD4-203ENST00000502612 LRP1BQ9NZR2 4599 aa2.52□□□□□ -2.01
NEDD4-203ENST00000502612 SPINK7P58062 85 aa2.51□□□□□ -2.01
NEDD4-203ENST00000502612 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
NEDD4-203ENST00000502612 RPL37P61927 97 aaKnown RBP2.49□□□□□ -2.01
NEDD4-203ENST00000502612 KMT2CQ8NEZ4 4911 aaKnown RBP2.48□□□□□ -2.01
NEDD4-203ENST00000502612 UQCR11O14957 56 aa2.48□□□□□ -2.01
NEDD4-203ENST00000502612 COX6B2Q6YFQ2 88 aa2.48□□□□□ -2.01
NEDD4-203ENST00000502612 SACSQ9NZJ4 4579 aa2.48□□□□□ -2.01
NEDD4-203ENST00000502612 RYR3Q15413 4870 aa2.47□□□□□ -2.01
NEDD4-203ENST00000502612 DYNC1H1Q14204 4646 aaKnown RBP2.47□□□□□ -2.01
NEDD4-203ENST00000502612 TPRXLQ17RH7 258 aa2.46□□□□□ -2.02
NEDD4-203ENST00000502612 VPS13BQ7Z7G8 4022 aa2.46□□□□□ -2.02
NEDD4-203ENST00000502612 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
NEDD4-203ENST00000502612 RYR2Q92736 4967 aa2.45□□□□□ -2.02
NEDD4-203ENST00000502612 PMAIP1Q13794 54 aa2.45□□□□□ -2.02
NEDD4-203ENST00000502612 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
NEDD4-203ENST00000502612 APOBP04114 4563 aaKnown RBP2.44□□□□□ -2.02
NEDD4-203ENST00000502612 MT1HL1P0DM35 61 aa2.43□□□□□ -2.02
NEDD4-203ENST00000502612 SPATA8Q6RVD6 105 aa2.43□□□□□ -2.02
NEDD4-203ENST00000502612 LCA10Q71F78 164 aa2.43□□□□□ -2.02
NEDD4-203ENST00000502612 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
NEDD4-203ENST00000502612 PKHD1P08F94 4074 aa2.41□□□□□ -2.02
NEDD4-203ENST00000502612 S4R3F8 94 aa2.4□□□□□ -2.03
NEDD4-203ENST00000502612 BIRC6Q9NR09 4857 aa2.39□□□□□ -2.03
NEDD4-203ENST00000502612 EPPK1P58107 5090 aaKnown RBP2.39□□□□□ -2.03
NEDD4-203ENST00000502612 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
NEDD4-203ENST00000502612 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
NEDD4-203ENST00000502612 FAT1Q14517 4588 aa2.37□□□□□ -2.03
NEDD4-203ENST00000502612 A6NN06 94 aa2.37□□□□□ -2.03
NEDD4-203ENST00000502612 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
NEDD4-203ENST00000502612 CSAG1Q6PB30 78 aa2.36□□□□□ -2.03
NEDD4-203ENST00000502612 FLG2Q5D862 2391 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-203ENST00000502612 HSPG2P98160 4391 aa2.34□□□□□ -2.03
NEDD4-203ENST00000502612 RYR1P21817 5038 aa2.34□□□□□ -2.03
NEDD4-203ENST00000502612 FAT3Q8TDW7 4589 aa2.34□□□□□ -2.04
NEDD4-203ENST00000502612 H0YAA0 97 aa2.33□□□□□ -2.04
NEDD4-203ENST00000502612 TNXBP22105 4242 aa2.33□□□□□ -2.04
NEDD4-203ENST00000502612 M0QZ58 72 aa2.31□□□□□ -2.04
NEDD4-203ENST00000502612 KIAA1109Q2LD37 5005 aa2.3□□□□□ -2.04
NEDD4-203ENST00000502612 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
NEDD4-203ENST00000502612 HERC2O95714 4834 aa2.29□□□□□ -2.04
NEDD4-203ENST00000502612 LRP1Q07954 4544 aaKnown RBP2.27□□□□□ -2.05
NEDD4-203ENST00000502612 DMBT1Q9UGM3 2413 aaPredicted RBP2.25□□□□□ -2.05
NEDD4-203ENST00000502612 ROMO1P60602 79 aa2.24□□□□□ -2.05
NEDD4-203ENST00000502612 A0A0D9SG42 100 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 269.9 ms