RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 TGP01266 2768 aa0.54□□□□□ -2.32
VPS36-206ENST00000497149 MT1AP04731 61 aa0.54□□□□□ -2.32
VPS36-206ENST00000497149 KMT2AQ03164 3969 aa0.54□□□□□ -2.32
VPS36-206ENST00000497149 HTTP42858 3142 aa0.54□□□□□ -2.32
VPS36-206ENST00000497149 MGAM2Q2M2H8 2515 aa0.54□□□□□ -2.32
VPS36-206ENST00000497149 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
VPS36-206ENST00000497149 VPS13DQ5THJ4 4388 aa0.53□□□□□ -2.32
VPS36-206ENST00000497149 WDR87Q6ZQQ6 2873 aa0.53□□□□□ -2.32
VPS36-206ENST00000497149 SPTBN5Q9NRC6 3674 aaKnown RBP0.53□□□□□ -2.32
VPS36-206ENST00000497149 PRUNE2Q8WUY3 3088 aa0.53□□□□□ -2.32
VPS36-206ENST00000497149 SPTAN1Q13813 2472 aaKnown RBP0.53□□□□□ -2.32
VPS36-206ENST00000497149 APELAP0DMC3 54 aa0.53□□□□□ -2.32
VPS36-206ENST00000497149 DNAH11Q96DT5 4516 aa0.53□□□□□ -2.32
VPS36-206ENST00000497149 CUBNO60494 3623 aa0.53□□□□□ -2.32
VPS36-206ENST00000497149 ATMQ13315 3056 aa0.53□□□□□ -2.33
VPS36-206ENST00000497149 VPS13BQ7Z7G8 4022 aa0.52□□□□□ -2.33
VPS36-206ENST00000497149 DNAH12Q6ZR08 3092 aa0.52□□□□□ -2.33
VPS36-206ENST00000497149 TEX15Q9BXT5 2789 aa0.51□□□□□ -2.33
VPS36-206ENST00000497149 CFAP46Q8IYW2 2715 aa0.51□□□□□ -2.33
VPS36-206ENST00000497149 DYNC2H1Q8NCM8 4307 aaKnown RBP0.51□□□□□ -2.33
VPS36-206ENST00000497149 DEFB124Q8NES8 71 aa0.51□□□□□ -2.33
VPS36-206ENST00000497149 STAB2Q8WWQ8 2551 aa0.51□□□□□ -2.33
VPS36-206ENST00000497149 FLGP20930 4061 aaPredicted RBP0.5□□□□□ -2.33
VPS36-206ENST00000497149 SPRR2AP35326 72 aa0.5□□□□□ -2.33
VPS36-206ENST00000497149 NBEAL1Q6ZS30 2694 aa0.5□□□□□ -2.33
VPS36-206ENST00000497149 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
VPS36-206ENST00000497149 DEFB136Q30KP8 78 aa0.49□□□□□ -2.33
VPS36-206ENST00000497149 Q9Y3F1 56 aa0.49□□□□□ -2.33
VPS36-206ENST00000497149 MYCBP2O75592 4640 aa0.49□□□□□ -2.33
VPS36-206ENST00000497149 LAMA5O15230 3695 aa0.49□□□□□ -2.33
VPS36-206ENST00000497149 FRYLO94915 3013 aa0.48□□□□□ -2.33
VPS36-206ENST00000497149 MAP1AP78559 2803 aaPredicted RBP0.48□□□□□ -2.33
VPS36-206ENST00000497149 NBPF19A0A087WUL8 3843 aa0.48□□□□□ -2.33
VPS36-206ENST00000497149 DEFB1P60022 68 aa0.48□□□□□ -2.33
VPS36-206ENST00000497149 DNAH9Q9NYC9 4486 aa0.48□□□□□ -2.33
VPS36-206ENST00000497149 C5orf42Q9H799 3197 aa0.47□□□□□ -2.33
VPS36-206ENST00000497149 TRIOO75962 3097 aa0.47□□□□□ -2.33
VPS36-206ENST00000497149 SMR3BP02814 79 aaPredicted RBP0.47□□□□□ -2.33
VPS36-206ENST00000497149 DEFB133Q30KQ1 61 aa0.47□□□□□ -2.33
VPS36-206ENST00000497149 LAMA3Q16787 3333 aa0.47□□□□□ -2.33
VPS36-206ENST00000497149 DNAH3Q8TD57 4116 aa0.47□□□□□ -2.33
VPS36-206ENST00000497149 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
VPS36-206ENST00000497149 ANK3Q12955 4377 aaKnown RBP0.47□□□□□ -2.33
VPS36-206ENST00000497149 ITPR2Q14571 2701 aa0.46□□□□□ -2.34
VPS36-206ENST00000497149 COL6A3P12111 3177 aa0.46□□□□□ -2.34
VPS36-206ENST00000497149 LAMA1P25391 3075 aa0.46□□□□□ -2.34
VPS36-206ENST00000497149 AKAP9Q99996 3911 aa0.46□□□□□ -2.34
VPS36-206ENST00000497149 PKD1P98161 4303 aa0.46□□□□□ -2.34
VPS36-206ENST00000497149 CSMD1Q96PZ7 3565 aa0.46□□□□□ -2.34
VPS36-206ENST00000497149 DNAH2Q9P225 4427 aa0.46□□□□□ -2.34
VPS36-206ENST00000497149 LRP1Q07954 4544 aaKnown RBP0.45□□□□□ -2.34
VPS36-206ENST00000497149 DNAH10Q8IVF4 4471 aa0.45□□□□□ -2.34
VPS36-206ENST00000497149 RELNP78509 3460 aa0.45□□□□□ -2.34
VPS36-206ENST00000497149 DNAH8Q96JB1 4490 aa0.45□□□□□ -2.34
VPS36-206ENST00000497149 CD52P31358 61 aa0.45□□□□□ -2.34
VPS36-206ENST00000497149 RPS29P62273 56 aaKnown RBP0.45□□□□□ -2.34
VPS36-206ENST00000497149 NIPBLQ6KC79 2804 aaeCLIP0.45□□□□□ -2.34
VPS36-206ENST00000497149 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
VPS36-206ENST00000497149 HECTD4Q9Y4D8 3996 aa0.44□□□□□ -2.34
VPS36-206ENST00000497149 SZT2Q5T011 3432 aa0.44□□□□□ -2.34
VPS36-206ENST00000497149 PKHD1L1Q86WI1 4243 aa0.44□□□□□ -2.34
VPS36-206ENST00000497149 HSPG2P98160 4391 aa0.43□□□□□ -2.34
VPS36-206ENST00000497149 APOBP04114 4563 aaKnown RBP0.43□□□□□ -2.34
VPS36-206ENST00000497149 LPAP08519 4548 aa0.43□□□□□ -2.34
VPS36-206ENST00000497149 SPRR2EP22531 72 aa0.43□□□□□ -2.34
VPS36-206ENST00000497149 KRTAP19-5Q3LI72 72 aa0.43□□□□□ -2.34
VPS36-206ENST00000497149 FAT3Q8TDW7 4589 aa0.43□□□□□ -2.34
VPS36-206ENST00000497149 PLECQ15149 4684 aaKnown RBP0.43□□□□□ -2.34
VPS36-206ENST00000497149 SVEP1Q4LDE5 3571 aa0.42□□□□□ -2.34
VPS36-206ENST00000497149 SPRR2FQ96RM1 72 aa0.42□□□□□ -2.34
VPS36-206ENST00000497149 DYNC1H1Q14204 4646 aaKnown RBP0.42□□□□□ -2.34
VPS36-206ENST00000497149 CEP295Q9C0D2 2601 aa0.42□□□□□ -2.34
VPS36-206ENST00000497149 SMG1Q96Q15 3661 aaKnown RBP0.42□□□□□ -2.34
VPS36-206ENST00000497149 DNAH17Q9UFH2 4485 aa0.41□□□□□ -2.34
VPS36-206ENST00000497149 DNAH7Q8WXX0 4024 aa0.41□□□□□ -2.34
VPS36-206ENST00000497149 DNAH5Q8TE73 4624 aa0.41□□□□□ -2.34
VPS36-206ENST00000497149 MKI67P46013 3256 aaKnown RBP0.4□□□□□ -2.35
VPS36-206ENST00000497149 DEFB108BQ8NET1 73 aa0.4□□□□□ -2.35
VPS36-206ENST00000497149 TLN1Q9Y490 2541 aaKnown RBP0.4□□□□□ -2.35
VPS36-206ENST00000497149 SRCAPQ6ZRS2 3230 aa0.4□□□□□ -2.35
VPS36-206ENST00000497149 DNAH1Q9P2D7 4330 aa0.4□□□□□ -2.35
VPS36-206ENST00000497149 LRP1BQ9NZR2 4599 aa0.39□□□□□ -2.35
VPS36-206ENST00000497149 LINC01556Q5JQF7 62 aa0.39□□□□□ -2.35
VPS36-206ENST00000497149 MYO9AB2RTY4 2548 aa0.39□□□□□ -2.35
VPS36-206ENST00000497149 CENPEQ02224 2701 aa0.39□□□□□ -2.35
VPS36-206ENST00000497149 FAT1Q14517 4588 aa0.38□□□□□ -2.35
VPS36-206ENST00000497149 DNAH6Q9C0G6 4158 aa0.38□□□□□ -2.35
VPS36-206ENST00000497149 TRRAPQ9Y4A5 3859 aa0.38□□□□□ -2.35
VPS36-206ENST00000497149 FREM2Q5SZK8 3169 aa0.38□□□□□ -2.35
VPS36-206ENST00000497149 LAMA2P24043 3122 aaKnown RBP0.38□□□□□ -2.35
VPS36-206ENST00000497149 A0A096LPF7 62 aa0.37□□□□□ -2.35
VPS36-206ENST00000497149 STATHP02808 62 aa0.37□□□□□ -2.35
VPS36-206ENST00000497149 HMCN2Q8NDA2 5059 aa0.36□□□□□ -2.35
VPS36-206ENST00000497149 MUC5BQ9HC84 5762 aaPredicted RBP0.36□□□□□ -2.35
VPS36-206ENST00000497149 MT1HP80294 61 aa0.36□□□□□ -2.35
VPS36-206ENST00000497149 COX14Q96I36 57 aa0.36□□□□□ -2.35
VPS36-206ENST00000497149 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
VPS36-206ENST00000497149 HERC1Q15751 4861 aa0.36□□□□□ -2.35
VPS36-206ENST00000497149 PKHD1P08F94 4074 aa0.35□□□□□ -2.35
VPS36-206ENST00000497149 CMYA5Q8N3K9 4069 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms