RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 TIMM8BQ9Y5J9 83 aaPredicted RBP0.05□□□□□ -2.4
VPS26A-208ENST00000497022 MYO18BQ8IUG5 2567 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 C5orf42Q9H799 3197 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 SONP18583 2426 aaKnown RBP0.05□□□□□ -2.4
VPS26A-208ENST00000497022 SPRR2BP35325 72 aa0.04□□□□□ -2.4
VPS26A-208ENST00000497022 KAAG1Q9UBP8 84 aa0.04□□□□□ -2.4
VPS26A-208ENST00000497022 NBEAQ8NFP9 2946 aa0.04□□□□□ -2.4
VPS26A-208ENST00000497022 ITPR3Q14573 2671 aa0.04□□□□□ -2.4
VPS26A-208ENST00000497022 MGAQ8IWI9 3026 aa0.04□□□□□ -2.4
VPS26A-208ENST00000497022 LRRK2Q5S007 2527 aa0.04□□□□□ -2.4
VPS26A-208ENST00000497022 EPG5Q9HCE0 2579 aa0.03□□□□□ -2.4
VPS26A-208ENST00000497022 MMP24-AS1A0A0U1RRL7 71 aa0.03□□□□□ -2.4
VPS26A-208ENST00000497022 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
VPS26A-208ENST00000497022 ABRACLQ9P1F3 81 aa0.03□□□□□ -2.4
VPS26A-208ENST00000497022 SYNE2Q8WXH0 6885 aaKnown RBP0.03□□□□□ -2.4
VPS26A-208ENST00000497022 APC2O95996 2303 aa0.03□□□□□ -2.41
VPS26A-208ENST00000497022 MXRA5Q9NR99 2828 aa0.03□□□□□ -2.41
VPS26A-208ENST00000497022 NBEAL1Q6ZS30 2694 aa0.02□□□□□ -2.41
VPS26A-208ENST00000497022 RIF1Q5UIP0 2472 aaKnown RBP0.02□□□□□ -2.41
VPS26A-208ENST00000497022 RYR2Q92736 4967 aa0.02□□□□□ -2.41
VPS26A-208ENST00000497022 WFDC10BQ8IUB3 73 aa0.02□□□□□ -2.41
VPS26A-208ENST00000497022 CLTCL1P53675 1640 aa0.02□□□□□ -2.41
VPS26A-208ENST00000497022 ACACBO00763 2458 aa0.01□□□□□ -2.41
VPS26A-208ENST00000497022 IGLV5-48A0A075B6I7 105 aa0.01□□□□□ -2.41
VPS26A-208ENST00000497022 H0YGX0 51 aa0.01□□□□□ -2.41
VPS26A-208ENST00000497022 KRTAP19-5Q3LI72 72 aa0.01□□□□□ -2.41
VPS26A-208ENST00000497022 RNF213Q63HN8 5207 aa0.01□□□□□ -2.41
VPS26A-208ENST00000497022 ITPR1Q14643 2758 aa0.01□□□□□ -2.41
VPS26A-208ENST00000497022 SAMD9LQ8IVG5 1584 aa0.01□□□□□ -2.41
VPS26A-208ENST00000497022 TEX15Q9BXT5 2789 aa0□□□□□ -2.41
VPS26A-208ENST00000497022 FSIP2Q5CZC0 6907 aa0□□□□□ -2.41
VPS26A-208ENST00000497022 STAB2Q8WWQ8 2551 aa0□□□□□ -2.41
VPS26A-208ENST00000497022 CFAP54Q96N23 3096 aa0□□□□□ -2.41
VPS26A-208ENST00000497022 DUOX1Q9NRD9 1551 aa0□□□□□ -2.41
VPS26A-208ENST00000497022 TMEM167BQ9NRX6 74 aa0□□□□□ -2.41
VPS26A-208ENST00000497022 RYR3Q15413 4870 aa-0□□□□□ -2.41
VPS26A-208ENST00000497022 LAMA3Q16787 3333 aa-0□□□□□ -2.41
VPS26A-208ENST00000497022 TLN2Q9Y4G6 2542 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 CCDC168Q8NDH2 2452 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 MACF1Q9UPN3 7388 aaKnown RBP-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 HYDINQ4G0P3 5121 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 USP9XQ93008 2570 aaPredicted RBP-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 SPRR2EP22531 72 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 SPRR2AP35326 72 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 SERF2P84101 59 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 TOMM5Q8N4H5 51 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 KIAA1109Q2LD37 5005 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 DMDP11532 3685 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 ACACAQ13085 2346 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 ADGRG4Q8IZF6 3080 aa-0.01□□□□□ -2.41
VPS26A-208ENST00000497022 MTORP42345 2549 aa-0.02□□□□□ -2.41
VPS26A-208ENST00000497022 MROH2BQ7Z745 1585 aa-0.02□□□□□ -2.41
VPS26A-208ENST00000497022 DMXL2Q8TDJ6 3036 aa-0.02□□□□□ -2.41
VPS26A-208ENST00000497022 MUC3AQ02505 3323 aa-0.02□□□□□ -2.41
VPS26A-208ENST00000497022 COL6A5A8TX70 2615 aa-0.02□□□□□ -2.41
VPS26A-208ENST00000497022 H3BNG1 76 aa-0.02□□□□□ -2.41
VPS26A-208ENST00000497022 SPRR2FQ96RM1 72 aa-0.02□□□□□ -2.41
VPS26A-208ENST00000497022 SMIM2Q9BVW6 85 aa-0.02□□□□□ -2.41
VPS26A-208ENST00000497022 NDUFA1O15239 70 aa-0.03□□□□□ -2.41
VPS26A-208ENST00000497022 WDFY4Q6ZS81 3184 aa-0.03□□□□□ -2.41
VPS26A-208ENST00000497022 MGAM2Q2M2H8 2515 aa-0.04□□□□□ -2.42
VPS26A-208ENST00000497022 SMR3BP02814 79 aaPredicted RBP-0.04□□□□□ -2.42
VPS26A-208ENST00000497022 MT1AP04731 61 aa-0.04□□□□□ -2.42
VPS26A-208ENST00000497022 ATMQ13315 3056 aa-0.04□□□□□ -2.42
VPS26A-208ENST00000497022 FAM186AA6NE01 2351 aa-0.05□□□□□ -2.42
VPS26A-208ENST00000497022 H0YGG7 62 aa-0.05□□□□□ -2.42
VPS26A-208ENST00000497022 CLPSL2Q6UWE3 100 aa-0.05□□□□□ -2.42
VPS26A-208ENST00000497022 MYO15AQ9UKN7 3530 aa-0.05□□□□□ -2.42
VPS26A-208ENST00000497022 LRBAP50851 2863 aa-0.05□□□□□ -2.42
VPS26A-208ENST00000497022 H3BUA1 57 aa-0.06□□□□□ -2.42
VPS26A-208ENST00000497022 POLR2KP53803 58 aaKnown RBP-0.06□□□□□ -2.42
VPS26A-208ENST00000497022 DEFB110Q30KQ9 67 aa-0.06□□□□□ -2.42
VPS26A-208ENST00000497022 KRTAP8-1Q8IUC2 63 aa-0.06□□□□□ -2.42
VPS26A-208ENST00000497022 CSMD2Q7Z408 3487 aa-0.06□□□□□ -2.42
VPS26A-208ENST00000497022 SZT2Q5T011 3432 aa-0.06□□□□□ -2.42
VPS26A-208ENST00000497022 NIPBLQ6KC79 2804 aaeCLIP-0.07□□□□□ -2.42
VPS26A-208ENST00000497022 A8MTW9 85 aa-0.07□□□□□ -2.42
VPS26A-208ENST00000497022 M0QY20 66 aa-0.07□□□□□ -2.42
VPS26A-208ENST00000497022 KRTAP6-1Q3LI64 71 aa-0.07□□□□□ -2.42
VPS26A-208ENST00000497022 EYSQ5T1H1 3165 aa-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 DSTQ03001 7570 aaKnown RBP-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 PRUNE2Q8WUY3 3088 aa-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 C9orf92A6NGG3 77 aa-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 RPL39P62891 51 aaKnown RBP-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 KRTAP19-7Q3SYF9 63 aa-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 LAMA2P24043 3122 aaKnown RBP-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 SPTAN1Q13813 2472 aaKnown RBP-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 SRCAPQ6ZRS2 3230 aa-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 GCC2Q8IWJ2 1684 aa-0.08□□□□□ -2.42
VPS26A-208ENST00000497022 FRYLO94915 3013 aa-0.09□□□□□ -2.42
VPS26A-208ENST00000497022 WDFY3Q8IZQ1 3526 aa-0.09□□□□□ -2.42
VPS26A-208ENST00000497022 ABCA13Q86UQ4 5058 aa-0.09□□□□□ -2.42
VPS26A-208ENST00000497022 BOD1L1Q8NFC6 3051 aa-0.09□□□□□ -2.42
VPS26A-208ENST00000497022 CFAP46Q8IYW2 2715 aa-0.09□□□□□ -2.42
VPS26A-208ENST00000497022 TNP1P09430 55 aa-0.1□□□□□ -2.43
VPS26A-208ENST00000497022 DEFB131AP59861 70 aa-0.1□□□□□ -2.43
VPS26A-208ENST00000497022 RPL39LQ96EH5 51 aaKnown RBP-0.1□□□□□ -2.43
VPS26A-208ENST00000497022 NOP10Q9NPE3 64 aaKnown RBP-0.1□□□□□ -2.43
VPS26A-208ENST00000497022 DNAH12Q6ZR08 3092 aa-0.11□□□□□ -2.43
VPS26A-208ENST00000497022 MKI67P46013 3256 aaKnown RBP-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms