RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 S100A3P33764 101 aa1.43□□□□□ -2.18
EXOSC3-208ENST00000496910 SPINK13Q1W4C9 94 aa1.43□□□□□ -2.18
EXOSC3-208ENST00000496910 HILPDAQ9Y5L2 63 aa1.43□□□□□ -2.18
EXOSC3-208ENST00000496910 A0A087WWC5 75 aa1.42□□□□□ -2.18
EXOSC3-208ENST00000496910 GNGT1P63211 74 aa1.42□□□□□ -2.18
EXOSC3-208ENST00000496910 COX14Q96I36 57 aa1.42□□□□□ -2.18
EXOSC3-208ENST00000496910 A0A1B0GUT8 65 aa1.41□□□□□ -2.18
EXOSC3-208ENST00000496910 IFI27P40305 119 aaPredicted RBP1.41□□□□□ -2.18
EXOSC3-208ENST00000496910 A0A087WXM4 84 aa1.4□□□□□ -2.19
EXOSC3-208ENST00000496910 COX8AP10176 69 aa1.4□□□□□ -2.19
EXOSC3-208ENST00000496910 ATP5EP2Q5VTU8 51 aa1.4□□□□□ -2.19
EXOSC3-208ENST00000496910 TRBV6-1A0A0K0K1D8 114 aa1.39□□□□□ -2.19
EXOSC3-208ENST00000496910 KRTAP12-4P60329 112 aa1.39□□□□□ -2.19
EXOSC3-208ENST00000496910 TRAV21A0A0B4J279 112 aa1.38□□□□□ -2.19
EXOSC3-208ENST00000496910 LINC00959A0A1B0GUT2 108 aa1.38□□□□□ -2.19
EXOSC3-208ENST00000496910 H3BUX3 64 aa1.38□□□□□ -2.19
EXOSC3-208ENST00000496910 H3BVH4 76 aa1.38□□□□□ -2.19
EXOSC3-208ENST00000496910 IFI6P09912 130 aa1.38□□□□□ -2.19
EXOSC3-208ENST00000496910 A0A1B0GU69 56 aa1.37□□□□□ -2.19
EXOSC3-208ENST00000496910 SFTA3P0C7M3 94 aa1.36□□□□□ -2.19
EXOSC3-208ENST00000496910 DEFB136Q30KP8 78 aa1.36□□□□□ -2.19
EXOSC3-208ENST00000496910 Q6ZSA8 131 aa1.36□□□□□ -2.19
EXOSC3-208ENST00000496910 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
EXOSC3-208ENST00000496910 FXYD6-FXYD2A0A087WZ82 144 aa1.35□□□□□ -2.19
EXOSC3-208ENST00000496910 C3orf79P0CE67 100 aa1.35□□□□□ -2.19
EXOSC3-208ENST00000496910 KRTAP12-3P60328 96 aa1.35□□□□□ -2.19
EXOSC3-208ENST00000496910 SSBP3-AS1Q7Z2R9 100 aa1.35□□□□□ -2.19
EXOSC3-208ENST00000496910 GAFA1Q96PS6 74 aa1.33□□□□□ -2.2
EXOSC3-208ENST00000496910 NREPQ16612 68 aa1.32□□□□□ -2.2
EXOSC3-208ENST00000496910 NDUFB1O75438 58 aa1.31□□□□□ -2.2
EXOSC3-208ENST00000496910 GNG13Q9P2W3 67 aa1.31□□□□□ -2.2
EXOSC3-208ENST00000496910 ATXN8Q156A1 80 aa1.3□□□□□ -2.2
EXOSC3-208ENST00000496910 DEFB135Q30KP9 77 aa1.29□□□□□ -2.2
EXOSC3-208ENST00000496910 COX7BP24311 80 aa1.28□□□□□ -2.2
EXOSC3-208ENST00000496910 C10orf95Q9H7T3 257 aa1.28□□□□□ -2.2
EXOSC3-208ENST00000496910 DEFB131BA0A096LNP1 70 aa1.27□□□□□ -2.21
EXOSC3-208ENST00000496910 MT2AP02795 61 aa1.27□□□□□ -2.21
EXOSC3-208ENST00000496910 MT1FP04733 61 aa1.27□□□□□ -2.21
EXOSC3-208ENST00000496910 H0YGG7 62 aa1.26□□□□□ -2.21
EXOSC3-208ENST00000496910 I3L2K1 104 aa1.26□□□□□ -2.21
EXOSC3-208ENST00000496910 DEFB4AO15263 64 aa1.26□□□□□ -2.21
EXOSC3-208ENST00000496910 FXYD6P3P58550 94 aa1.26□□□□□ -2.21
EXOSC3-208ENST00000496910 ANGP03950 147 aaKnown RBP1.25□□□□□ -2.21
EXOSC3-208ENST00000496910 FAM103A1Q9BTL3 118 aaKnown RBP1.25□□□□□ -2.21
EXOSC3-208ENST00000496910 CRIPTQ9P021 101 aa1.25□□□□□ -2.21
EXOSC3-208ENST00000496910 SYNE1Q8NF91 8797 aaKnown RBP1.25□□□□□ -2.21
EXOSC3-208ENST00000496910 LINC01549A6NIU2 74 aa1.24□□□□□ -2.21
EXOSC3-208ENST00000496910 PRB3Q04118 309 aaPredicted RBP1.24□□□□□ -2.21
EXOSC3-208ENST00000496910 SPINK9Q5DT21 86 aa1.24□□□□□ -2.21
EXOSC3-208ENST00000496910 A0A0D9SFI3 127 aa1.23□□□□□ -2.21
EXOSC3-208ENST00000496910 ENHOQ6UWT2 76 aa1.23□□□□□ -2.21
EXOSC3-208ENST00000496910 A0A0D9SG42 100 aa1.22□□□□□ -2.21
EXOSC3-208ENST00000496910 CPSF4LA6NMK7 179 aaKnown RBP1.22□□□□□ -2.21
EXOSC3-208ENST00000496910 NDUFA4O00483 81 aa1.22□□□□□ -2.21
EXOSC3-208ENST00000496910 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
EXOSC3-208ENST00000496910 TP53AIP1Q9HCN2 124 aa1.22□□□□□ -2.21
EXOSC3-208ENST00000496910 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
EXOSC3-208ENST00000496910 K7EQZ3 153 aa1.19□□□□□ -2.22
EXOSC3-208ENST00000496910 COX6B2Q6YFQ2 88 aa1.18□□□□□ -2.22
EXOSC3-208ENST00000496910 CNFNQ9BYD5 112 aa1.18□□□□□ -2.22
EXOSC3-208ENST00000496910 ARL14EPLP0DKL9 152 aa1.16□□□□□ -2.22
EXOSC3-208ENST00000496910 KRTAP20-2Q3LI61 65 aa1.16□□□□□ -2.22
EXOSC3-208ENST00000496910 PIGYQ3MUY2 71 aa1.16□□□□□ -2.22
EXOSC3-208ENST00000496910 PRO0255Q9UI72 69 aa1.16□□□□□ -2.22
EXOSC3-208ENST00000496910 RPL38P63173 70 aaKnown RBP1.15□□□□□ -2.23
EXOSC3-208ENST00000496910 COX6A2Q02221 97 aa1.15□□□□□ -2.23
EXOSC3-208ENST00000496910 UBL5Q9BZL1 73 aa1.15□□□□□ -2.23
EXOSC3-208ENST00000496910 K7EMI3 77 aa1.14□□□□□ -2.23
EXOSC3-208ENST00000496910 DEFB106AQ8N104 65 aa1.14□□□□□ -2.23
EXOSC3-208ENST00000496910 USMG5Q96IX5 58 aa1.14□□□□□ -2.23
EXOSC3-208ENST00000496910 I3L3M4 83 aa1.13□□□□□ -2.23
EXOSC3-208ENST00000496910 SPINK6Q6UWN8 80 aa1.13□□□□□ -2.23
EXOSC3-208ENST00000496910 KRTAP8-1Q8IUC2 63 aa1.13□□□□□ -2.23
EXOSC3-208ENST00000496910 MRPL34Q9BQ48 92 aaKnown RBP1.13□□□□□ -2.23
EXOSC3-208ENST00000496910 KCNQ1DNQ9H478 68 aa1.13□□□□□ -2.23
EXOSC3-208ENST00000496910 FCER1GP30273 86 aa1.12□□□□□ -2.23
EXOSC3-208ENST00000496910 Q8IZM0 81 aa1.12□□□□□ -2.23
EXOSC3-208ENST00000496910 FXYD6Q9H0Q3 95 aa1.12□□□□□ -2.23
EXOSC3-208ENST00000496910 ETDCA0A1B0GVM5 59 aa1.09□□□□□ -2.23
EXOSC3-208ENST00000496910 SPRR1AP35321 89 aa1.08□□□□□ -2.24
EXOSC3-208ENST00000496910 CRIP1P50238 77 aa1.08□□□□□ -2.24
EXOSC3-208ENST00000496910 DEFB114Q30KQ6 69 aa1.08□□□□□ -2.24
EXOSC3-208ENST00000496910 SNRPGP15A8MWD9 76 aa1.07□□□□□ -2.24
EXOSC3-208ENST00000496910 MRPL33O75394 65 aaKnown RBP1.07□□□□□ -2.24
EXOSC3-208ENST00000496910 NDUFA3O95167 84 aa1.07□□□□□ -2.24
EXOSC3-208ENST00000496910 HTN3P15516 51 aa1.07□□□□□ -2.24
EXOSC3-208ENST00000496910 NCBP2-AS2Q69YL0 99 aa1.07□□□□□ -2.24
EXOSC3-208ENST00000496910 M0R1W7 72 aa1.06□□□□□ -2.24
EXOSC3-208ENST00000496910 CCL22O00626 93 aa1.05□□□□□ -2.24
EXOSC3-208ENST00000496910 SPRR1BP22528 89 aa1.05□□□□□ -2.24
EXOSC3-208ENST00000496910 IGIPA6NJ69 53 aa1.04□□□□□ -2.24
EXOSC3-208ENST00000496910 CDKN2A-AS1Q9UH64 79 aa1.04□□□□□ -2.24
EXOSC3-208ENST00000496910 H1FX-AS1Q4G0G2 97 aa1.03□□□□□ -2.24
EXOSC3-208ENST00000496910 DEFB105AQ8NG35 78 aa1.03□□□□□ -2.24
EXOSC3-208ENST00000496910 NMES1Q9C002 83 aa1.03□□□□□ -2.24
EXOSC3-208ENST00000496910 H0YAA0 97 aa1.01□□□□□ -2.25
EXOSC3-208ENST00000496910 SPART-AS1P0CW21 52 aa1□□□□□ -2.25
EXOSC3-208ENST00000496910 KLK9Q2XQG4 91 aa1□□□□□ -2.25
EXOSC3-208ENST00000496910 LINC00158P58513 81 aa0.99□□□□□ -2.25
EXOSC3-208ENST00000496910 SERF2P84101 59 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms