RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 KRTAP10-4P60372 401 aaPredicted RBP3.82□□□□□ -1.8
MACF1-224ENST00000496804 DNAH1Q9P2D7 4330 aa3.81□□□□□ -1.8
MACF1-224ENST00000496804 DNAH11Q96DT5 4516 aa3.77□□□□□ -1.81
MACF1-224ENST00000496804 DNAH2Q9P225 4427 aa3.76□□□□□ -1.81
MACF1-224ENST00000496804 PLECQ15149 4684 aaKnown RBP3.75□□□□□ -1.81
MACF1-224ENST00000496804 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
MACF1-224ENST00000496804 DNAH17Q9UFH2 4485 aa3.75□□□□□ -1.81
MACF1-224ENST00000496804 MT1HL1P0DM35 61 aa3.73□□□□□ -1.81
MACF1-224ENST00000496804 DNAH9Q9NYC9 4486 aa3.71□□□□□ -1.82
MACF1-224ENST00000496804 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
MACF1-224ENST00000496804 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
MACF1-224ENST00000496804 VPS13DQ5THJ4 4388 aa3.66□□□□□ -1.82
MACF1-224ENST00000496804 DNAH3Q8TD57 4116 aa3.66□□□□□ -1.82
MACF1-224ENST00000496804 DNAH5Q8TE73 4624 aa3.65□□□□□ -1.83
MACF1-224ENST00000496804 ANK2Q01484 3957 aa3.64□□□□□ -1.83
MACF1-224ENST00000496804 LRP1BQ9NZR2 4599 aa3.64□□□□□ -1.83
MACF1-224ENST00000496804 FRAS1Q86XX4 4008 aa3.63□□□□□ -1.83
MACF1-224ENST00000496804 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
MACF1-224ENST00000496804 STARD9Q9P2P6 4700 aa3.55□□□□□ -1.84
MACF1-224ENST00000496804 SACSQ9NZJ4 4579 aa3.54□□□□□ -1.84
MACF1-224ENST00000496804 FAT1Q14517 4588 aa3.53□□□□□ -1.85
MACF1-224ENST00000496804 VPS13BQ7Z7G8 4022 aa3.52□□□□□ -1.85
MACF1-224ENST00000496804 APOBP04114 4563 aaKnown RBP3.51□□□□□ -1.85
MACF1-224ENST00000496804 LYSTQ99698 3801 aa3.51□□□□□ -1.85
MACF1-224ENST00000496804 HECTD4Q9Y4D8 3996 aa3.48□□□□□ -1.85
MACF1-224ENST00000496804 DYNC2H1Q8NCM8 4307 aaKnown RBP3.48□□□□□ -1.85
MACF1-224ENST00000496804 KMT2AQ03164 3969 aa3.47□□□□□ -1.85
MACF1-224ENST00000496804 DYNC1H1Q14204 4646 aaKnown RBP3.45□□□□□ -1.86
MACF1-224ENST00000496804 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
MACF1-224ENST00000496804 KRTAP4-1Q9BYQ7 146 aa3.45□□□□□ -1.86
MACF1-224ENST00000496804 CMYA5Q8N3K9 4069 aa3.45□□□□□ -1.86
MACF1-224ENST00000496804 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
MACF1-224ENST00000496804 DNAH6Q9C0G6 4158 aa3.4□□□□□ -1.86
MACF1-224ENST00000496804 SPRR2GQ9BYE4 73 aa3.4□□□□□ -1.87
MACF1-224ENST00000496804 DNAH7Q8WXX0 4024 aa3.38□□□□□ -1.87
MACF1-224ENST00000496804 KRTAP4-5Q9BYR2 181 aa3.36□□□□□ -1.87
MACF1-224ENST00000496804 FAT2Q9NYQ8 4349 aa3.35□□□□□ -1.87
MACF1-224ENST00000496804 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
MACF1-224ENST00000496804 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
MACF1-224ENST00000496804 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
MACF1-224ENST00000496804 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
MACF1-224ENST00000496804 PRKDCP78527 4128 aaKnown RBP3.32□□□□□ -1.88
MACF1-224ENST00000496804 LRP1Q07954 4544 aaKnown RBP3.3□□□□□ -1.88
MACF1-224ENST00000496804 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
MACF1-224ENST00000496804 DNHD1Q96M86 4753 aa3.25□□□□□ -1.89
MACF1-224ENST00000496804 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
MACF1-224ENST00000496804 MT2AP02795 61 aa3.23□□□□□ -1.89
MACF1-224ENST00000496804 RYR1P21817 5038 aa3.22□□□□□ -1.89
MACF1-224ENST00000496804 MT1FP04733 61 aa3.2□□□□□ -1.9
MACF1-224ENST00000496804 LRP2P98164 4655 aa3.2□□□□□ -1.9
MACF1-224ENST00000496804 MT1HP80294 61 aa3.17□□□□□ -1.9
MACF1-224ENST00000496804 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
MACF1-224ENST00000496804 HSPG2P98160 4391 aa3.14□□□□□ -1.91
MACF1-224ENST00000496804 KRTAP19-8Q3LI54 63 aa3.13□□□□□ -1.91
MACF1-224ENST00000496804 MT1XP80297 61 aa3.13□□□□□ -1.91
MACF1-224ENST00000496804 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
MACF1-224ENST00000496804 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
MACF1-224ENST00000496804 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
MACF1-224ENST00000496804 PKHD1P08F94 4074 aa3.09□□□□□ -1.91
MACF1-224ENST00000496804 HYDINQ4G0P3 5121 aa3.09□□□□□ -1.92
MACF1-224ENST00000496804 KRTAP17-1Q9BYP8 105 aa3.08□□□□□ -1.92
MACF1-224ENST00000496804 PKD1P98161 4303 aa3.08□□□□□ -1.92
MACF1-224ENST00000496804 KIAA1109Q2LD37 5005 aa3.05□□□□□ -1.92
MACF1-224ENST00000496804 MT1BP07438 61 aa3.04□□□□□ -1.92
MACF1-224ENST00000496804 KMT2CQ8NEZ4 4911 aaKnown RBP3.04□□□□□ -1.92
MACF1-224ENST00000496804 RYR3Q15413 4870 aa3.03□□□□□ -1.92
MACF1-224ENST00000496804 RYR2Q92736 4967 aa3.03□□□□□ -1.92
MACF1-224ENST00000496804 KRTAP19-2Q3LHN2 52 aa3.01□□□□□ -1.93
MACF1-224ENST00000496804 TNXBP22105 4242 aa2.99□□□□□ -1.93
MACF1-224ENST00000496804 LPAP08519 4548 aa2.98□□□□□ -1.93
MACF1-224ENST00000496804 MUC17Q685J3 4493 aa2.96□□□□□ -1.94
MACF1-224ENST00000496804 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
MACF1-224ENST00000496804 KRTAP4-8A0A0G2JLE6 195 aa2.92□□□□□ -1.94
MACF1-224ENST00000496804 KRTAP4-8Q9BYQ9 185 aa2.92□□□□□ -1.94
MACF1-224ENST00000496804 LCE2CQ5TA81 110 aa2.92□□□□□ -1.94
MACF1-224ENST00000496804 KRTAP4-7Q9BYR0 210 aa2.92□□□□□ -1.94
MACF1-224ENST00000496804 LCE3BQ5TA77 95 aa2.91□□□□□ -1.94
MACF1-224ENST00000496804 MT1GP13640 62 aa2.9□□□□□ -1.94
MACF1-224ENST00000496804 FLGP20930 4061 aaPredicted RBP2.9□□□□□ -1.95
MACF1-224ENST00000496804 HERC1Q15751 4861 aa2.9□□□□□ -1.95
MACF1-224ENST00000496804 BIRC6Q9NR09 4857 aa2.89□□□□□ -1.95
MACF1-224ENST00000496804 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
MACF1-224ENST00000496804 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
MACF1-224ENST00000496804 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
MACF1-224ENST00000496804 HERC2O95714 4834 aa2.88□□□□□ -1.95
MACF1-224ENST00000496804 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
MACF1-224ENST00000496804 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
MACF1-224ENST00000496804 KRTAP9-3Q9BYQ3 159 aa2.83□□□□□ -1.96
MACF1-224ENST00000496804 MT1LQ93083 61 aa2.82□□□□□ -1.96
MACF1-224ENST00000496804 PRM1P04553 51 aa2.78□□□□□ -1.96
MACF1-224ENST00000496804 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
MACF1-224ENST00000496804 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
MACF1-224ENST00000496804 MT1EP04732 61 aa2.75□□□□□ -1.97
MACF1-224ENST00000496804 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
MACF1-224ENST00000496804 LOC100996750A0A140TA64 210 aa2.71□□□□□ -1.98
MACF1-224ENST00000496804 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
MACF1-224ENST00000496804 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
MACF1-224ENST00000496804 PCLOQ9Y6V0 5065 aa2.66□□□□□ -1.98
MACF1-224ENST00000496804 LCE2BO14633 110 aa2.66□□□□□ -1.98
MACF1-224ENST00000496804 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 1091.7 ms