RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
BRD9-213ENST00000495794 VPS13DQ5THJ4 4388 aa6.31□□□□□ -1.4
BRD9-213ENST00000495794 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
BRD9-213ENST00000495794 DNAH11Q96DT5 4516 aa6.28□□□□□ -1.4
BRD9-213ENST00000495794 DNAH5Q8TE73 4624 aa6.28□□□□□ -1.4
BRD9-213ENST00000495794 DNAH17Q9UFH2 4485 aa6.25□□□□□ -1.41
BRD9-213ENST00000495794 STARD9Q9P2P6 4700 aa6.24□□□□□ -1.41
BRD9-213ENST00000495794 DNHD1Q96M86 4753 aa6.21□□□□□ -1.41
BRD9-213ENST00000495794 DNAH3Q8TD57 4116 aa6.14□□□□□ -1.43
BRD9-213ENST00000495794 ANK2Q01484 3957 aa6.14□□□□□ -1.43
BRD9-213ENST00000495794 PRKDCP78527 4128 aaKnown RBP6.13□□□□□ -1.43
BRD9-213ENST00000495794 DNAH2Q9P225 4427 aa6.1□□□□□ -1.43
BRD9-213ENST00000495794 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
BRD9-213ENST00000495794 DYNC1H1Q14204 4646 aaKnown RBP6.06□□□□□ -1.44
BRD9-213ENST00000495794 DNAH8Q96JB1 4490 aa6.06□□□□□ -1.44
BRD9-213ENST00000495794 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
BRD9-213ENST00000495794 INE1O15225 51 aa6.05□□□□□ -1.44
BRD9-213ENST00000495794 LRP1BQ9NZR2 4599 aa6.04□□□□□ -1.44
BRD9-213ENST00000495794 KMT2AQ03164 3969 aa6.03□□□□□ -1.44
BRD9-213ENST00000495794 CMYA5Q8N3K9 4069 aa6.03□□□□□ -1.44
BRD9-213ENST00000495794 FAT1Q14517 4588 aa6.02□□□□□ -1.45
BRD9-213ENST00000495794 DYNC2H1Q8NCM8 4307 aaKnown RBP6.01□□□□□ -1.45
BRD9-213ENST00000495794 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
BRD9-213ENST00000495794 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
BRD9-213ENST00000495794 FAT2Q9NYQ8 4349 aa5.91□□□□□ -1.46
BRD9-213ENST00000495794 SACSQ9NZJ4 4579 aa5.91□□□□□ -1.46
BRD9-213ENST00000495794 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
BRD9-213ENST00000495794 LYSTQ99698 3801 aa5.88□□□□□ -1.47
BRD9-213ENST00000495794 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
BRD9-213ENST00000495794 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
BRD9-213ENST00000495794 HECTD4Q9Y4D8 3996 aa5.81□□□□□ -1.48
BRD9-213ENST00000495794 FRAS1Q86XX4 4008 aa5.81□□□□□ -1.48
BRD9-213ENST00000495794 DNAH7Q8WXX0 4024 aa5.8□□□□□ -1.48
BRD9-213ENST00000495794 RYR1P21817 5038 aa5.8□□□□□ -1.48
BRD9-213ENST00000495794 DNAH6Q9C0G6 4158 aa5.78□□□□□ -1.48
BRD9-213ENST00000495794 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
BRD9-213ENST00000495794 APOBP04114 4563 aaKnown RBP5.71□□□□□ -1.5
BRD9-213ENST00000495794 KIAA1109Q2LD37 5005 aa5.68□□□□□ -1.5
BRD9-213ENST00000495794 MT1HP80294 61 aa5.66□□□□□ -1.5
BRD9-213ENST00000495794 MYCBP2O75592 4640 aa5.65□□□□□ -1.5
BRD9-213ENST00000495794 KRTAP17-1Q9BYP8 105 aa5.65□□□□□ -1.51
BRD9-213ENST00000495794 MT2AP02795 61 aa5.62□□□□□ -1.51
BRD9-213ENST00000495794 HYDINQ4G0P3 5121 aa5.62□□□□□ -1.51
BRD9-213ENST00000495794 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
BRD9-213ENST00000495794 RYR3Q15413 4870 aa5.62□□□□□ -1.51
BRD9-213ENST00000495794 LRP1Q07954 4544 aaKnown RBP5.61□□□□□ -1.51
BRD9-213ENST00000495794 RYR2Q92736 4967 aa5.56□□□□□ -1.52
BRD9-213ENST00000495794 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
BRD9-213ENST00000495794 PKHD1P08F94 4074 aa5.52□□□□□ -1.53
BRD9-213ENST00000495794 MT1FP04733 61 aa5.51□□□□□ -1.53
BRD9-213ENST00000495794 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
BRD9-213ENST00000495794 PKD1P98161 4303 aa5.43□□□□□ -1.54
BRD9-213ENST00000495794 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
BRD9-213ENST00000495794 HSPG2P98160 4391 aa5.4□□□□□ -1.55
BRD9-213ENST00000495794 LRP2P98164 4655 aa5.32□□□□□ -1.56
BRD9-213ENST00000495794 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
BRD9-213ENST00000495794 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
BRD9-213ENST00000495794 HERC2O95714 4834 aa5.29□□□□□ -1.56
BRD9-213ENST00000495794 KMT2CQ8NEZ4 4911 aaKnown RBP5.25□□□□□ -1.57
BRD9-213ENST00000495794 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
BRD9-213ENST00000495794 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
BRD9-213ENST00000495794 PKHD1L1Q86WI1 4243 aa5.21□□□□□ -1.57
BRD9-213ENST00000495794 TNXBP22105 4242 aa5.18□□□□□ -1.58
BRD9-213ENST00000495794 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
BRD9-213ENST00000495794 LPAP08519 4548 aa5.16□□□□□ -1.58
BRD9-213ENST00000495794 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.58
BRD9-213ENST00000495794 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
BRD9-213ENST00000495794 BIRC6Q9NR09 4857 aa5.14□□□□□ -1.59
BRD9-213ENST00000495794 MT1XP80297 61 aa5.1□□□□□ -1.59
BRD9-213ENST00000495794 LCE2CQ5TA81 110 aa5.09□□□□□ -1.59
BRD9-213ENST00000495794 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
BRD9-213ENST00000495794 MT1BP07438 61 aa5.08□□□□□ -1.6
BRD9-213ENST00000495794 HERC1Q15751 4861 aa5.04□□□□□ -1.6
BRD9-213ENST00000495794 PCLOQ9Y6V0 5065 aa5.03□□□□□ -1.6
BRD9-213ENST00000495794 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
BRD9-213ENST00000495794 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
BRD9-213ENST00000495794 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
BRD9-213ENST00000495794 ABCA13Q86UQ4 5058 aa4.96□□□□□ -1.62
BRD9-213ENST00000495794 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
BRD9-213ENST00000495794 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.62
BRD9-213ENST00000495794 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.62
BRD9-213ENST00000495794 MUC17Q685J3 4493 aa4.9□□□□□ -1.63
BRD9-213ENST00000495794 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
BRD9-213ENST00000495794 MT1GP13640 62 aa4.79□□□□□ -1.64
BRD9-213ENST00000495794 SPRR2EP22531 72 aa4.77□□□□□ -1.65
BRD9-213ENST00000495794 SPRR2BP35325 72 aa4.77□□□□□ -1.65
BRD9-213ENST00000495794 SPRR2AP35326 72 aa4.77□□□□□ -1.65
BRD9-213ENST00000495794 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
BRD9-213ENST00000495794 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
BRD9-213ENST00000495794 LCE2BO14633 110 aa4.73□□□□□ -1.65
BRD9-213ENST00000495794 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
BRD9-213ENST00000495794 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
BRD9-213ENST00000495794 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
BRD9-213ENST00000495794 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
BRD9-213ENST00000495794 MT1LQ93083 61 aa4.61□□□□□ -1.67
BRD9-213ENST00000495794 UBR4Q5T4S7 5183 aa4.6□□□□□ -1.67
BRD9-213ENST00000495794 SPRR2DP22532 72 aa4.6□□□□□ -1.67
BRD9-213ENST00000495794 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
BRD9-213ENST00000495794 MT1EP04732 61 aa4.57□□□□□ -1.68
BRD9-213ENST00000495794 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms