RNA–Protein interactions for RNA: ENST00000494124.2

DENND4C-206, Transcript of DENN domain containing 4C, humanhuman

TSL 1 (best)

Gene DENND4C, Length 5,335 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4C-206ENST00000494124 HECTD4Q9Y4D8 3996 aa1.7□□□□□ -2.14
DENND4C-206ENST00000494124 KRTAP3-1Q9BYR8 98 aa1.7□□□□□ -2.14
DENND4C-206ENST00000494124 KRTAP10-7P60409 375 aaPredicted RBP1.69□□□□□ -2.14
DENND4C-206ENST00000494124 DNAH7Q8WXX0 4024 aa1.68□□□□□ -2.14
DENND4C-206ENST00000494124 SPENQ96T58 3664 aaKnown RBP1.68□□□□□ -2.14
DENND4C-206ENST00000494124 BIRC6Q9NR09 4857 aa1.66□□□□□ -2.14
DENND4C-206ENST00000494124 LYSTQ99698 3801 aa1.66□□□□□ -2.14
DENND4C-206ENST00000494124 OTOGQ6ZRI0 2925 aa1.65□□□□□ -2.15
DENND4C-206ENST00000494124 KRTAP17-1Q9BYP8 105 aa1.65□□□□□ -2.15
DENND4C-206ENST00000494124 FBN1P35555 2871 aaKnown RBP1.65□□□□□ -2.15
DENND4C-206ENST00000494124 KRTAP10-5P60370 271 aa1.64□□□□□ -2.15
DENND4C-206ENST00000494124 FAT2Q9NYQ8 4349 aa1.64□□□□□ -2.15
DENND4C-206ENST00000494124 KMT2AQ03164 3969 aa1.63□□□□□ -2.15
DENND4C-206ENST00000494124 MYCBP2O75592 4640 aa1.63□□□□□ -2.15
DENND4C-206ENST00000494124 RYR3Q15413 4870 aa1.63□□□□□ -2.15
DENND4C-206ENST00000494124 CSMD2Q7Z408 3487 aa1.62□□□□□ -2.15
DENND4C-206ENST00000494124 PRKDCP78527 4128 aaKnown RBP1.62□□□□□ -2.15
DENND4C-206ENST00000494124 LCE4AQ5TA78 99 aa1.62□□□□□ -2.15
DENND4C-206ENST00000494124 WDFY3Q8IZQ1 3526 aa1.62□□□□□ -2.15
DENND4C-206ENST00000494124 CSMD1Q96PZ7 3565 aa1.62□□□□□ -2.15
DENND4C-206ENST00000494124 KRTAP4-5Q9BYR2 181 aa1.61□□□□□ -2.15
DENND4C-206ENST00000494124 KRTAP10-4P60372 401 aaPredicted RBP1.6□□□□□ -2.15
DENND4C-206ENST00000494124 LCE3AQ5TA76 89 aa1.6□□□□□ -2.15
DENND4C-206ENST00000494124 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
DENND4C-206ENST00000494124 PKHD1L1Q86WI1 4243 aa1.59□□□□□ -2.16
DENND4C-206ENST00000494124 RYR2Q92736 4967 aa1.58□□□□□ -2.16
DENND4C-206ENST00000494124 HERC2O95714 4834 aa1.58□□□□□ -2.16
DENND4C-206ENST00000494124 ZNF469Q96JG9 3925 aaPredicted RBP1.58□□□□□ -2.16
DENND4C-206ENST00000494124 TRRAPQ9Y4A5 3859 aa1.57□□□□□ -2.16
DENND4C-206ENST00000494124 VPS13BQ7Z7G8 4022 aa1.57□□□□□ -2.16
DENND4C-206ENST00000494124 VPS13CQ709C8 3753 aa1.56□□□□□ -2.16
DENND4C-206ENST00000494124 FRAS1Q86XX4 4008 aa1.56□□□□□ -2.16
DENND4C-206ENST00000494124 HUWE1Q7Z6Z7 4374 aaKnown RBP1.56□□□□□ -2.16
DENND4C-206ENST00000494124 DNAH2Q9P225 4427 aa1.55□□□□□ -2.16
DENND4C-206ENST00000494124 DNAH9Q9NYC9 4486 aa1.55□□□□□ -2.16
DENND4C-206ENST00000494124 KRTAP9-6A0A140TA67 174 aa1.55□□□□□ -2.16
DENND4C-206ENST00000494124 PKHD1P08F94 4074 aa1.55□□□□□ -2.16
DENND4C-206ENST00000494124 SACSQ9NZJ4 4579 aa1.54□□□□□ -2.16
DENND4C-206ENST00000494124 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
DENND4C-206ENST00000494124 DNAH17Q9UFH2 4485 aa1.54□□□□□ -2.16
DENND4C-206ENST00000494124 SPRR2GQ9BYE4 73 aa1.53□□□□□ -2.16
DENND4C-206ENST00000494124 KRTAP9-9Q9BYP9 154 aa1.53□□□□□ -2.16
DENND4C-206ENST00000494124 KRTAP9-4Q9BYQ2 154 aa1.53□□□□□ -2.16
DENND4C-206ENST00000494124 MT2AP02795 61 aa1.53□□□□□ -2.17
DENND4C-206ENST00000494124 HRNRQ86YZ3 2850 aaPredicted RBP1.52□□□□□ -2.17
DENND4C-206ENST00000494124 MT1HP80294 61 aa1.52□□□□□ -2.17
DENND4C-206ENST00000494124 CUBNO60494 3623 aa1.52□□□□□ -2.17
DENND4C-206ENST00000494124 DYNC1H1Q14204 4646 aaKnown RBP1.52□□□□□ -2.17
DENND4C-206ENST00000494124 DNAH10Q8IVF4 4471 aa1.52□□□□□ -2.17
DENND4C-206ENST00000494124 LOC100996750A0A140TA64 210 aa1.52□□□□□ -2.17
DENND4C-206ENST00000494124 KRTAP4-6Q9BYQ5 205 aa1.52□□□□□ -2.17
DENND4C-206ENST00000494124 VPS13DQ5THJ4 4388 aa1.52□□□□□ -2.17
DENND4C-206ENST00000494124 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
DENND4C-206ENST00000494124 SPRR2EP22531 72 aa1.51□□□□□ -2.17
DENND4C-206ENST00000494124 SPRR2BP35325 72 aa1.51□□□□□ -2.17
DENND4C-206ENST00000494124 SPRR2AP35326 72 aa1.51□□□□□ -2.17
DENND4C-206ENST00000494124 PCLOQ9Y6V0 5065 aa1.51□□□□□ -2.17
DENND4C-206ENST00000494124 KRTAP9-7A8MTY7 169 aa1.5□□□□□ -2.17
DENND4C-206ENST00000494124 KMT2CQ8NEZ4 4911 aaKnown RBP1.49□□□□□ -2.17
DENND4C-206ENST00000494124 LRP1BQ9NZR2 4599 aa1.48□□□□□ -2.17
DENND4C-206ENST00000494124 EPPK1P58107 5090 aaKnown RBP1.48□□□□□ -2.17
DENND4C-206ENST00000494124 SPRR2DP22532 72 aa1.48□□□□□ -2.17
DENND4C-206ENST00000494124 KRTAP19-1Q8IUB9 90 aa1.48□□□□□ -2.17
DENND4C-206ENST00000494124 HYDINQ4G0P3 5121 aa1.47□□□□□ -2.17
DENND4C-206ENST00000494124 FAT3Q8TDW7 4589 aa1.46□□□□□ -2.18
DENND4C-206ENST00000494124 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.46□□□□□ -2.18
DENND4C-206ENST00000494124 PLECQ15149 4684 aaKnown RBP1.45□□□□□ -2.18
DENND4C-206ENST00000494124 SVEP1Q4LDE5 3571 aa1.45□□□□□ -2.18
DENND4C-206ENST00000494124 TNXBP22105 4242 aa1.44□□□□□ -2.18
DENND4C-206ENST00000494124 MT1FP04733 61 aa1.44□□□□□ -2.18
DENND4C-206ENST00000494124 LCE3CQ5T5A8 94 aa1.44□□□□□ -2.18
DENND4C-206ENST00000494124 KRTAP19-5Q3LI72 72 aa1.44□□□□□ -2.18
DENND4C-206ENST00000494124 MT1GP13640 62 aa1.44□□□□□ -2.18
DENND4C-206ENST00000494124 HERC1Q15751 4861 aa1.44□□□□□ -2.18
DENND4C-206ENST00000494124 KRTAP9-2Q9BYQ4 174 aa1.43□□□□□ -2.18
DENND4C-206ENST00000494124 DNAH11Q96DT5 4516 aa1.43□□□□□ -2.18
DENND4C-206ENST00000494124 HSPG2P98160 4391 aa1.43□□□□□ -2.18
DENND4C-206ENST00000494124 KRTAP19-8Q3LI54 63 aa1.43□□□□□ -2.18
DENND4C-206ENST00000494124 PKD1P98161 4303 aa1.43□□□□□ -2.18
DENND4C-206ENST00000494124 KIAA1109Q2LD37 5005 aa1.43□□□□□ -2.18
DENND4C-206ENST00000494124 KRTAP4-8Q9BYQ9 185 aa1.42□□□□□ -2.18
DENND4C-206ENST00000494124 MT3P25713 68 aa1.41□□□□□ -2.18
DENND4C-206ENST00000494124 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
DENND4C-206ENST00000494124 FAT1Q14517 4588 aa1.41□□□□□ -2.18
DENND4C-206ENST00000494124 STARD9Q9P2P6 4700 aa1.41□□□□□ -2.18
DENND4C-206ENST00000494124 DNAH8Q96JB1 4490 aa1.39□□□□□ -2.19
DENND4C-206ENST00000494124 ABCA13Q86UQ4 5058 aa1.39□□□□□ -2.19
DENND4C-206ENST00000494124 KRTAP4-12Q9BQ66 201 aa1.39□□□□□ -2.19
DENND4C-206ENST00000494124 MUC17Q685J3 4493 aa1.38□□□□□ -2.19
DENND4C-206ENST00000494124 DNAH5Q8TE73 4624 aa1.37□□□□□ -2.19
DENND4C-206ENST00000494124 RYR1P21817 5038 aa1.37□□□□□ -2.19
DENND4C-206ENST00000494124 KRTAP20-1Q3LI63 56 aa1.36□□□□□ -2.19
DENND4C-206ENST00000494124 CSMD3Q7Z407 3707 aa1.36□□□□□ -2.19
DENND4C-206ENST00000494124 APOBP04114 4563 aaKnown RBP1.36□□□□□ -2.19
DENND4C-206ENST00000494124 LRP1Q07954 4544 aaKnown RBP1.36□□□□□ -2.19
DENND4C-206ENST00000494124 LCE3DQ9BYE3 92 aa1.36□□□□□ -2.19
DENND4C-206ENST00000494124 LCE3BQ5TA77 95 aa1.35□□□□□ -2.19
DENND4C-206ENST00000494124 KRTAP9-3Q9BYQ3 159 aa1.35□□□□□ -2.19
DENND4C-206ENST00000494124 LCE3EQ5T5B0 92 aa1.35□□□□□ -2.19
DENND4C-206ENST00000494124 SPRR5A0A1B0GTR4 108 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms