RNA–Protein interactions for RNA: ENST00000492259.6

RTEL1-TNFRSF6B-203, Transcript of RTEL1-TNFRSF6B readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 5

Gene RTEL1-TNFRSF6B, Length 4,824 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP12-3P60328 96 aa6.7□□□□□ -1.34
RTEL1-TNFRSF6B-203ENST00000492259 DNAH9Q9NYC9 4486 aa6.66□□□□□ -1.34
RTEL1-TNFRSF6B-203ENST00000492259 DNAH1Q9P2D7 4330 aa6.62□□□□□ -1.35
RTEL1-TNFRSF6B-203ENST00000492259 CRCT1Q9UGL9 99 aa6.59□□□□□ -1.35
RTEL1-TNFRSF6B-203ENST00000492259 PLECQ15149 4684 aaKnown RBP6.57□□□□□ -1.36
RTEL1-TNFRSF6B-203ENST00000492259 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
RTEL1-TNFRSF6B-203ENST00000492259 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
RTEL1-TNFRSF6B-203ENST00000492259 DNAH5Q8TE73 4624 aa6.56□□□□□ -1.36
RTEL1-TNFRSF6B-203ENST00000492259 DNAH11Q96DT5 4516 aa6.55□□□□□ -1.36
RTEL1-TNFRSF6B-203ENST00000492259 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
RTEL1-TNFRSF6B-203ENST00000492259 DNAH17Q9UFH2 4485 aa6.49□□□□□ -1.37
RTEL1-TNFRSF6B-203ENST00000492259 VPS13DQ5THJ4 4388 aa6.47□□□□□ -1.37
RTEL1-TNFRSF6B-203ENST00000492259 DNHD1Q96M86 4753 aa6.46□□□□□ -1.38
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP10-5P60370 271 aa6.39□□□□□ -1.39
RTEL1-TNFRSF6B-203ENST00000492259 DNAH2Q9P225 4427 aa6.37□□□□□ -1.39
RTEL1-TNFRSF6B-203ENST00000492259 DNAH8Q96JB1 4490 aa6.37□□□□□ -1.39
RTEL1-TNFRSF6B-203ENST00000492259 ANK2Q01484 3957 aa6.35□□□□□ -1.39
RTEL1-TNFRSF6B-203ENST00000492259 LYSTQ99698 3801 aa6.3□□□□□ -1.4
RTEL1-TNFRSF6B-203ENST00000492259 FAT1Q14517 4588 aa6.3□□□□□ -1.4
RTEL1-TNFRSF6B-203ENST00000492259 LRP1BQ9NZR2 4599 aa6.3□□□□□ -1.4
RTEL1-TNFRSF6B-203ENST00000492259 DNAH3Q8TD57 4116 aa6.26□□□□□ -1.41
RTEL1-TNFRSF6B-203ENST00000492259 STARD9Q9P2P6 4700 aa6.26□□□□□ -1.41
RTEL1-TNFRSF6B-203ENST00000492259 DYNC1H1Q14204 4646 aaKnown RBP6.24□□□□□ -1.41
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
RTEL1-TNFRSF6B-203ENST00000492259 SACSQ9NZJ4 4579 aa6.2□□□□□ -1.42
RTEL1-TNFRSF6B-203ENST00000492259 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
RTEL1-TNFRSF6B-203ENST00000492259 DYNC2H1Q8NCM8 4307 aaKnown RBP6.16□□□□□ -1.42
RTEL1-TNFRSF6B-203ENST00000492259 CMYA5Q8N3K9 4069 aa6.12□□□□□ -1.43
RTEL1-TNFRSF6B-203ENST00000492259 MT1HP80294 61 aa6.09□□□□□ -1.43
RTEL1-TNFRSF6B-203ENST00000492259 RYR1P21817 5038 aa6.08□□□□□ -1.44
RTEL1-TNFRSF6B-203ENST00000492259 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
RTEL1-TNFRSF6B-203ENST00000492259 FAT2Q9NYQ8 4349 aa6.06□□□□□ -1.44
RTEL1-TNFRSF6B-203ENST00000492259 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
RTEL1-TNFRSF6B-203ENST00000492259 PRKDCP78527 4128 aaKnown RBP6.04□□□□□ -1.44
RTEL1-TNFRSF6B-203ENST00000492259 KMT2AQ03164 3969 aa6.04□□□□□ -1.44
RTEL1-TNFRSF6B-203ENST00000492259 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
RTEL1-TNFRSF6B-203ENST00000492259 MT2AP02795 61 aa5.99□□□□□ -1.45
RTEL1-TNFRSF6B-203ENST00000492259 FAT3Q8TDW7 4589 aa5.96□□□□□ -1.45
RTEL1-TNFRSF6B-203ENST00000492259 KIAA1109Q2LD37 5005 aa5.96□□□□□ -1.45
RTEL1-TNFRSF6B-203ENST00000492259 FRAS1Q86XX4 4008 aa5.93□□□□□ -1.46
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
RTEL1-TNFRSF6B-203ENST00000492259 DNAH7Q8WXX0 4024 aa5.91□□□□□ -1.46
RTEL1-TNFRSF6B-203ENST00000492259 HECTD4Q9Y4D8 3996 aa5.87□□□□□ -1.47
RTEL1-TNFRSF6B-203ENST00000492259 LRP1Q07954 4544 aaKnown RBP5.85□□□□□ -1.47
RTEL1-TNFRSF6B-203ENST00000492259 DNAH6Q9C0G6 4158 aa5.85□□□□□ -1.47
RTEL1-TNFRSF6B-203ENST00000492259 MT1FP04733 61 aa5.85□□□□□ -1.47
RTEL1-TNFRSF6B-203ENST00000492259 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
RTEL1-TNFRSF6B-203ENST00000492259 RYR3Q15413 4870 aa5.81□□□□□ -1.48
RTEL1-TNFRSF6B-203ENST00000492259 RYR2Q92736 4967 aa5.78□□□□□ -1.48
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
RTEL1-TNFRSF6B-203ENST00000492259 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP19-1Q8IUB9 90 aa5.72□□□□□ -1.49
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
RTEL1-TNFRSF6B-203ENST00000492259 LRP2P98164 4655 aa5.65□□□□□ -1.5
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.51
RTEL1-TNFRSF6B-203ENST00000492259 HYDINQ4G0P3 5121 aa5.64□□□□□ -1.51
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
RTEL1-TNFRSF6B-203ENST00000492259 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
RTEL1-TNFRSF6B-203ENST00000492259 HERC2O95714 4834 aa5.54□□□□□ -1.52
RTEL1-TNFRSF6B-203ENST00000492259 PKHD1P08F94 4074 aa5.53□□□□□ -1.52
RTEL1-TNFRSF6B-203ENST00000492259 MT1XP80297 61 aa5.51□□□□□ -1.53
RTEL1-TNFRSF6B-203ENST00000492259 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
RTEL1-TNFRSF6B-203ENST00000492259 HERC1Q15751 4861 aa5.47□□□□□ -1.53
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
RTEL1-TNFRSF6B-203ENST00000492259 MT1BP07438 61 aa5.44□□□□□ -1.54
RTEL1-TNFRSF6B-203ENST00000492259 HSPG2P98160 4391 aa5.43□□□□□ -1.54
RTEL1-TNFRSF6B-203ENST00000492259 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
RTEL1-TNFRSF6B-203ENST00000492259 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
RTEL1-TNFRSF6B-203ENST00000492259 KMT2CQ8NEZ4 4911 aaKnown RBP5.35□□□□□ -1.55
RTEL1-TNFRSF6B-203ENST00000492259 PKD1P98161 4303 aa5.34□□□□□ -1.55
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
RTEL1-TNFRSF6B-203ENST00000492259 LPAP08519 4548 aa5.31□□□□□ -1.56
RTEL1-TNFRSF6B-203ENST00000492259 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
RTEL1-TNFRSF6B-203ENST00000492259 PKHD1L1Q86WI1 4243 aa5.28□□□□□ -1.56
RTEL1-TNFRSF6B-203ENST00000492259 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
RTEL1-TNFRSF6B-203ENST00000492259 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
RTEL1-TNFRSF6B-203ENST00000492259 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 MT1GP13640 62 aa5.21□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 LCE3EQ5T5B0 92 aa5.2□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 TNXBP22105 4242 aa5.19□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 SPRR2EP22531 72 aa5.16□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 SPRR2BP35325 72 aa5.16□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 SPRR2AP35326 72 aa5.16□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 EPPK1P58107 5090 aaKnown RBP5.16□□□□□ -1.58
RTEL1-TNFRSF6B-203ENST00000492259 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
RTEL1-TNFRSF6B-203ENST00000492259 FLGP20930 4061 aaPredicted RBP5.12□□□□□ -1.59
RTEL1-TNFRSF6B-203ENST00000492259 LCE2BO14633 110 aa5.05□□□□□ -1.6
RTEL1-TNFRSF6B-203ENST00000492259 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
RTEL1-TNFRSF6B-203ENST00000492259 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
RTEL1-TNFRSF6B-203ENST00000492259 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
RTEL1-TNFRSF6B-203ENST00000492259 SPRR2DP22532 72 aa5.01□□□□□ -1.61
RTEL1-TNFRSF6B-203ENST00000492259 MUC2Q02817 5179 aa4.98□□□□□ -1.61
RTEL1-TNFRSF6B-203ENST00000492259 MT1LQ93083 61 aa4.97□□□□□ -1.61
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms