RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 SLC25A20O43772 301 aa1.39□□□□□ -2.19
PHC3-213ENST00000491258 TCL1BO95988 128 aa1.39□□□□□ -2.19
PHC3-213ENST00000491258 RBM3P98179 157 aaKnown RBP1.39□□□□□ -2.19
PHC3-213ENST00000491258 LINC01554Q52M75 96 aa1.39□□□□□ -2.19
PHC3-213ENST00000491258 ATP11AUNQ6ZP68 121 aa1.39□□□□□ -2.19
PHC3-213ENST00000491258 Q6ZRX8 168 aa1.39□□□□□ -2.19
PHC3-213ENST00000491258 USH2AO75445 5202 aa1.39□□□□□ -2.19
PHC3-213ENST00000491258 LEPROTL1O95214 131 aa1.38□□□□□ -2.19
PHC3-213ENST00000491258 COX8AP10176 69 aa1.38□□□□□ -2.19
PHC3-213ENST00000491258 PLNP26678 52 aa1.38□□□□□ -2.19
PHC3-213ENST00000491258 KRTAP19-2Q3LHN2 52 aa1.38□□□□□ -2.19
PHC3-213ENST00000491258 SOSTDC1Q6X4U4 206 aa1.38□□□□□ -2.19
PHC3-213ENST00000491258 LINC00643Q86TS7 51 aa1.38□□□□□ -2.19
PHC3-213ENST00000491258 ST20-AS1Q8NBB2 130 aa1.38□□□□□ -2.19
PHC3-213ENST00000491258 NHP2Q9NX24 153 aaKnown RBP1.38□□□□□ -2.19
PHC3-213ENST00000491258 TRAV23DV6A0A075B6W5 121 aa1.37□□□□□ -2.19
PHC3-213ENST00000491258 C3orf79P0CE67 100 aa1.37□□□□□ -2.19
PHC3-213ENST00000491258 SPRR1BP22528 89 aa1.37□□□□□ -2.19
PHC3-213ENST00000491258 S100A7L2Q5SY68 101 aa1.37□□□□□ -2.19
PHC3-213ENST00000491258 CLEC2BQ92478 149 aa1.37□□□□□ -2.19
PHC3-213ENST00000491258 HIGD1BQ9P298 99 aa1.37□□□□□ -2.19
PHC3-213ENST00000491258 CCKP06307 115 aa1.36□□□□□ -2.19
PHC3-213ENST00000491258 MT1HP80294 61 aa1.36□□□□□ -2.19
PHC3-213ENST00000491258 PCOTHQ58A44 107 aa1.36□□□□□ -2.19
PHC3-213ENST00000491258 LINC00308Q8TCZ7 52 aa1.36□□□□□ -2.19
PHC3-213ENST00000491258 A0A0B4J2C4 111 aa1.35□□□□□ -2.19
PHC3-213ENST00000491258 COX7BP24311 80 aa1.35□□□□□ -2.19
PHC3-213ENST00000491258 ELOF1P60002 83 aaKnown RBP1.35□□□□□ -2.19
PHC3-213ENST00000491258 Q1T7F1 81 aa1.35□□□□□ -2.19
PHC3-213ENST00000491258 LIMD2Q9BT23 127 aa1.35□□□□□ -2.19
PHC3-213ENST00000491258 TTTY13Q9BZ97 58 aa1.35□□□□□ -2.19
PHC3-213ENST00000491258 CYP4F30PQ9H0H9 118 aa1.35□□□□□ -2.19
PHC3-213ENST00000491258 IGLV5-48A0A075B6I7 105 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 TRAV13-2A0A0B4J235 113 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 A0A0G2JQZ4 141 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 TEX49A0A1B0GTD5 131 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 hDV103S1A0JD37 113 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 A6NED7 52 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 C9orf92A6NGG3 77 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 ZNF815PA8K554 130 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 H7C2G1 150 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 COX6CP09669 75 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 ATXN8Q156A1 80 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 SPTSSBQ8NFR3 76 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 DEFB105AQ8NG35 78 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 PRO1854Q9UHT4 67 aa1.34□□□□□ -2.19
PHC3-213ENST00000491258 P0C880 135 aa1.33□□□□□ -2.2
PHC3-213ENST00000491258 RPL37P61927 97 aaKnown RBP1.33□□□□□ -2.2
PHC3-213ENST00000491258 ATP5EP2Q5VTU8 51 aa1.33□□□□□ -2.2
PHC3-213ENST00000491258 CASC2Q6XLA1 102 aa1.33□□□□□ -2.2
PHC3-213ENST00000491258 C2orf91Q6ZV80 131 aa1.33□□□□□ -2.2
PHC3-213ENST00000491258 MUSTN1Q8IVN3 82 aa1.33□□□□□ -2.2
PHC3-213ENST00000491258 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
PHC3-213ENST00000491258 FLGP20930 4061 aaPredicted RBP1.33□□□□□ -2.2
PHC3-213ENST00000491258 TRAV7A0A075B6U4 112 aa1.32□□□□□ -2.2
PHC3-213ENST00000491258 FXYD2P54710 66 aa1.32□□□□□ -2.2
PHC3-213ENST00000491258 KLKP1Q107X0 134 aa1.32□□□□□ -2.2
PHC3-213ENST00000491258 LUZP6Q538Z0 58 aa1.32□□□□□ -2.2
PHC3-213ENST00000491258 LINC00575Q6W349 94 aa1.32□□□□□ -2.2
PHC3-213ENST00000491258 SMIM11BQ8TCY0 68 aa1.32□□□□□ -2.2
PHC3-213ENST00000491258 C14orf132Q9NPU4 83 aa1.32□□□□□ -2.2
PHC3-213ENST00000491258 A6NN06 94 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 HCG22E2RYF7 251 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 CHKB-CPT1BH3BT56 60 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 H7BZZ5 65 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 M0R2T5 61 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 BPY2O14599 106 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 Q6JHZ5 121 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 C20orf197Q8N268 126 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 TMEM254Q8TBM7 123 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 C8orf17Q9NRJ1 99 aa1.31□□□□□ -2.2
PHC3-213ENST00000491258 F8WEM9 126 aa1.3□□□□□ -2.2
PHC3-213ENST00000491258 COX6B2Q6YFQ2 88 aa1.3□□□□□ -2.2
PHC3-213ENST00000491258 Q6ZQY7 126 aa1.3□□□□□ -2.2
PHC3-213ENST00000491258 OBSCN-AS1Q96MR7 158 aa1.3□□□□□ -2.2
PHC3-213ENST00000491258 CDC42SE1Q9NRR8 79 aa1.3□□□□□ -2.2
PHC3-213ENST00000491258 H3BPC8 53 aa1.29□□□□□ -2.2
PHC3-213ENST00000491258 DNAL4O96015 105 aa1.29□□□□□ -2.2
PHC3-213ENST00000491258 BAALC-AS2P0C853 105 aa1.29□□□□□ -2.2
PHC3-213ENST00000491258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.29□□□□□ -2.2
PHC3-213ENST00000491258 C20orf166-AS1Q96NR2 134 aa1.29□□□□□ -2.2
PHC3-213ENST00000491258 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
PHC3-213ENST00000491258 TRAV22A0A0B4J277 110 aa1.28□□□□□ -2.2
PHC3-213ENST00000491258 Q96NJ1 140 aa1.28□□□□□ -2.2
PHC3-213ENST00000491258 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
PHC3-213ENST00000491258 A0A087WSZ3 146 aa1.27□□□□□ -2.21
PHC3-213ENST00000491258 A8MWP4 228 aa1.27□□□□□ -2.21
PHC3-213ENST00000491258 H0YGX0 51 aa1.27□□□□□ -2.21
PHC3-213ENST00000491258 NDUFB1O75438 58 aa1.27□□□□□ -2.21
PHC3-213ENST00000491258 ROMO1P60602 79 aa1.27□□□□□ -2.21
PHC3-213ENST00000491258 Q6ZQT0 140 aa1.27□□□□□ -2.21
PHC3-213ENST00000491258 CYSTM1Q9H1C7 97 aa1.27□□□□□ -2.21
PHC3-213ENST00000491258 A0A1W2PNM2 257 aa1.26□□□□□ -2.21
PHC3-213ENST00000491258 MT2AP02795 61 aa1.26□□□□□ -2.21
PHC3-213ENST00000491258 MIR22HGQ0VDD5 57 aa1.26□□□□□ -2.21
PHC3-213ENST00000491258 SPINT4Q6UDR6 99 aa1.26□□□□□ -2.21
PHC3-213ENST00000491258 UBL5Q9BZL1 73 aa1.26□□□□□ -2.21
PHC3-213ENST00000491258 ORMDL1Q9P0S3 153 aa1.26□□□□□ -2.21
PHC3-213ENST00000491258 TRBV7-4A0A0J9YYF1 115 aa1.25□□□□□ -2.21
PHC3-213ENST00000491258 MT1FP04733 61 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms