RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 RPL37P61927 97 aaKnown RBP1.03□□□□□ -2.24
HMGN1-218ENST00000490032 PRLHP81277 87 aa1.03□□□□□ -2.24
HMGN1-218ENST00000490032 CLPSL2Q6UWE3 100 aa1.03□□□□□ -2.24
HMGN1-218ENST00000490032 UBE2DNLQ8IWF7 75 aa1.03□□□□□ -2.24
HMGN1-218ENST00000490032 TGP01266 2768 aa1.02□□□□□ -2.25
HMGN1-218ENST00000490032 DCHS2Q6V1P9 2916 aa1.02□□□□□ -2.25
HMGN1-218ENST00000490032 A0A0G2JQZ4 141 aa1.02□□□□□ -2.25
HMGN1-218ENST00000490032 MMP24-AS1A0A0U1RRL7 71 aa1.02□□□□□ -2.25
HMGN1-218ENST00000490032 HTN3P15516 51 aa1.02□□□□□ -2.25
HMGN1-218ENST00000490032 DEFB1P60022 68 aa1.02□□□□□ -2.25
HMGN1-218ENST00000490032 LINC01556Q5JQF7 62 aa1.02□□□□□ -2.25
HMGN1-218ENST00000490032 A0A096LPF7 62 aa1.01□□□□□ -2.25
HMGN1-218ENST00000490032 KRTAP26-1Q6PEX3 210 aa1.01□□□□□ -2.25
HMGN1-218ENST00000490032 MAP1AP78559 2803 aaPredicted RBP1□□□□□ -2.25
HMGN1-218ENST00000490032 H1FX-AS1Q4G0G2 97 aa1□□□□□ -2.25
HMGN1-218ENST00000490032 ZANQ9Y493 2812 aa1□□□□□ -2.25
HMGN1-218ENST00000490032 ZNF469Q96JG9 3925 aaPredicted RBP1□□□□□ -2.25
HMGN1-218ENST00000490032 A0A096LNI7 61 aa0.99□□□□□ -2.25
HMGN1-218ENST00000490032 INE1O15225 51 aa0.99□□□□□ -2.25
HMGN1-218ENST00000490032 SPINK1P00995 79 aa0.99□□□□□ -2.25
HMGN1-218ENST00000490032 DEFB136Q30KP8 78 aa0.99□□□□□ -2.25
HMGN1-218ENST00000490032 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
HMGN1-218ENST00000490032 SPINK6Q6UWN8 80 aa0.99□□□□□ -2.25
HMGN1-218ENST00000490032 FLG2Q5D862 2391 aaPredicted RBP0.99□□□□□ -2.25
HMGN1-218ENST00000490032 TENM3Q9P273 2699 aa0.99□□□□□ -2.25
HMGN1-218ENST00000490032 AKAP9Q99996 3911 aa0.98□□□□□ -2.25
HMGN1-218ENST00000490032 WNK2Q9Y3S1 2297 aa0.98□□□□□ -2.25
HMGN1-218ENST00000490032 HRNRQ86YZ3 2850 aaPredicted RBP0.98□□□□□ -2.25
HMGN1-218ENST00000490032 K7EIL1 84 aa0.98□□□□□ -2.25
HMGN1-218ENST00000490032 M0QZ58 72 aa0.98□□□□□ -2.25
HMGN1-218ENST00000490032 Q96NJ1 140 aa0.98□□□□□ -2.25
HMGN1-218ENST00000490032 APLNQ9ULZ1 77 aa0.98□□□□□ -2.25
HMGN1-218ENST00000490032 CUBNO60494 3623 aa0.97□□□□□ -2.25
HMGN1-218ENST00000490032 PLCE1Q9P212 2302 aa0.97□□□□□ -2.25
HMGN1-218ENST00000490032 VWFP04275 2813 aa0.97□□□□□ -2.25
HMGN1-218ENST00000490032 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
HMGN1-218ENST00000490032 TENM2Q9NT68 2774 aa0.96□□□□□ -2.25
HMGN1-218ENST00000490032 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
HMGN1-218ENST00000490032 A0A087WTM6 91 aa0.96□□□□□ -2.26
HMGN1-218ENST00000490032 NBDYA0A0U1RRE5 68 aa0.96□□□□□ -2.26
HMGN1-218ENST00000490032 DEFB135Q30KP9 77 aa0.96□□□□□ -2.26
HMGN1-218ENST00000490032 Q6ZSA8 131 aa0.96□□□□□ -2.26
HMGN1-218ENST00000490032 PRO2289Q9P1D8 64 aa0.96□□□□□ -2.26
HMGN1-218ENST00000490032 SVEP1Q4LDE5 3571 aa0.96□□□□□ -2.26
HMGN1-218ENST00000490032 STAB2Q8WWQ8 2551 aa0.95□□□□□ -2.26
HMGN1-218ENST00000490032 RPS29P62273 56 aaKnown RBP0.95□□□□□ -2.26
HMGN1-218ENST00000490032 ANK2Q01484 3957 aa0.94□□□□□ -2.26
HMGN1-218ENST00000490032 VPS13CQ709C8 3753 aa0.93□□□□□ -2.26
HMGN1-218ENST00000490032 DEFB4AO15263 64 aa0.93□□□□□ -2.26
HMGN1-218ENST00000490032 KMT2CQ8NEZ4 4911 aaKnown RBP0.92□□□□□ -2.26
HMGN1-218ENST00000490032 H0YAA0 97 aa0.92□□□□□ -2.26
HMGN1-218ENST00000490032 PRKDCP78527 4128 aaKnown RBP0.91□□□□□ -2.26
HMGN1-218ENST00000490032 TRRAPQ9Y4A5 3859 aa0.91□□□□□ -2.26
HMGN1-218ENST00000490032 COL7A1Q02388 2944 aa0.91□□□□□ -2.26
HMGN1-218ENST00000490032 A0A0D9SG42 100 aa0.91□□□□□ -2.26
HMGN1-218ENST00000490032 SPACA4Q8TDM5 124 aa0.91□□□□□ -2.26
HMGN1-218ENST00000490032 S4R3F8 94 aa0.91□□□□□ -2.26
HMGN1-218ENST00000490032 DMBT1Q9UGM3 2413 aaPredicted RBP0.91□□□□□ -2.26
HMGN1-218ENST00000490032 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
HMGN1-218ENST00000490032 ANK3Q12955 4377 aaKnown RBP0.9□□□□□ -2.26
HMGN1-218ENST00000490032 BIRC6Q9NR09 4857 aa0.9□□□□□ -2.26
HMGN1-218ENST00000490032 Q6ZRN7 208 aaPredicted RBP0.9□□□□□ -2.27
HMGN1-218ENST00000490032 C9orf92A6NGG3 77 aa0.89□□□□□ -2.27
HMGN1-218ENST00000490032 TPRXLQ17RH7 258 aa0.89□□□□□ -2.27
HMGN1-218ENST00000490032 RYR3Q15413 4870 aa0.88□□□□□ -2.27
HMGN1-218ENST00000490032 TNP1P09430 55 aa0.88□□□□□ -2.27
HMGN1-218ENST00000490032 Q5VSD8 79 aa0.88□□□□□ -2.27
HMGN1-218ENST00000490032 EPPK1P58107 5090 aaKnown RBP0.87□□□□□ -2.27
HMGN1-218ENST00000490032 HERC2O95714 4834 aa0.85□□□□□ -2.27
HMGN1-218ENST00000490032 HYDINQ4G0P3 5121 aa0.84□□□□□ -2.27
HMGN1-218ENST00000490032 DNAH1Q9P2D7 4330 aa0.84□□□□□ -2.28
HMGN1-218ENST00000490032 DYNC2H1Q8NCM8 4307 aaKnown RBP0.83□□□□□ -2.28
HMGN1-218ENST00000490032 C10orf95Q9H7T3 257 aa0.83□□□□□ -2.28
HMGN1-218ENST00000490032 PCLOQ9Y6V0 5065 aa0.83□□□□□ -2.28
HMGN1-218ENST00000490032 RYR2Q92736 4967 aa0.83□□□□□ -2.28
HMGN1-218ENST00000490032 KIAA1109Q2LD37 5005 aa0.83□□□□□ -2.28
HMGN1-218ENST00000490032 SRRM2Q9UQ35 2752 aaKnown RBP0.82□□□□□ -2.28
HMGN1-218ENST00000490032 SMR3BP02814 79 aaPredicted RBP0.81□□□□□ -2.28
HMGN1-218ENST00000490032 SACSQ9NZJ4 4579 aa0.81□□□□□ -2.28
HMGN1-218ENST00000490032 DNAH9Q9NYC9 4486 aa0.8□□□□□ -2.28
HMGN1-218ENST00000490032 UBR4Q5T4S7 5183 aa0.8□□□□□ -2.28
HMGN1-218ENST00000490032 CSMD3Q7Z407 3707 aa0.8□□□□□ -2.28
HMGN1-218ENST00000490032 CMYA5Q8N3K9 4069 aa0.79□□□□□ -2.28
HMGN1-218ENST00000490032 MT1HL1P0DM35 61 aa0.79□□□□□ -2.28
HMGN1-218ENST00000490032 KRTAP10-4P60372 401 aaPredicted RBP0.79□□□□□ -2.28
HMGN1-218ENST00000490032 RYR1P21817 5038 aa0.79□□□□□ -2.28
HMGN1-218ENST00000490032 LYSTQ99698 3801 aa0.78□□□□□ -2.28
HMGN1-218ENST00000490032 HECTD4Q9Y4D8 3996 aa0.78□□□□□ -2.28
HMGN1-218ENST00000490032 DNAH3Q8TD57 4116 aa0.77□□□□□ -2.29
HMGN1-218ENST00000490032 ALMS1Q8TCU4 4167 aa0.77□□□□□ -2.29
HMGN1-218ENST00000490032 FRAS1Q86XX4 4008 aa0.77□□□□□ -2.29
HMGN1-218ENST00000490032 HUWE1Q7Z6Z7 4374 aaKnown RBP0.77□□□□□ -2.29
HMGN1-218ENST00000490032 STARD9Q9P2P6 4700 aa0.77□□□□□ -2.29
HMGN1-218ENST00000490032 HERC1Q15751 4861 aa0.77□□□□□ -2.29
HMGN1-218ENST00000490032 DNAH11Q96DT5 4516 aa0.76□□□□□ -2.29
HMGN1-218ENST00000490032 ABCA13Q86UQ4 5058 aa0.76□□□□□ -2.29
HMGN1-218ENST00000490032 HSPG2P98160 4391 aa0.75□□□□□ -2.29
HMGN1-218ENST00000490032 KMT2AQ03164 3969 aa0.75□□□□□ -2.29
HMGN1-218ENST00000490032 M0R2T5 61 aa0.75□□□□□ -2.29
HMGN1-218ENST00000490032 PLECQ15149 4684 aaKnown RBP0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms