RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 HIST1H2BJP06899 126 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 HIST1H2BOP23527 126 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 HIST1H2BBP33778 126 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 HIST1H2BDP58876 126 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 HIST1H2BCP62807 126 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 HIST2H2BEQ16778 126 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.62□□□□□ -1.51
UFD1-209ENST00000489406 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 HIST1H2BHQ93079 126 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 HIST1H2BNQ99877 126 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 HIST1H2BMQ99879 126 aa5.62□□□□□ -1.51
UFD1-209ENST00000489406 MT1EP04732 61 aa5.61□□□□□ -1.51
UFD1-209ENST00000489406 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
UFD1-209ENST00000489406 AHNAKQ09666 5890 aaKnown RBP5.59□□□□□ -1.51
UFD1-209ENST00000489406 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
UFD1-209ENST00000489406 PRO1854Q9UHT4 67 aa5.55□□□□□ -1.52
UFD1-209ENST00000489406 R4GN34 69 aa5.54□□□□□ -1.52
UFD1-209ENST00000489406 TSTD3H0UI37 97 aa5.53□□□□□ -1.52
UFD1-209ENST00000489406 CEND1Q8N111 149 aa5.52□□□□□ -1.53
UFD1-209ENST00000489406 MT1GP13640 62 aa5.51□□□□□ -1.53
UFD1-209ENST00000489406 CXCL6P80162 114 aa5.51□□□□□ -1.53
UFD1-209ENST00000489406 S100A2P29034 98 aa5.5□□□□□ -1.53
UFD1-209ENST00000489406 NREPQ16612 68 aa5.5□□□□□ -1.53
UFD1-209ENST00000489406 LINC01554Q52M75 96 aa5.49□□□□□ -1.53
UFD1-209ENST00000489406 C14orf144Q96I85 54 aa5.49□□□□□ -1.53
UFD1-209ENST00000489406 A0A1B0GW54 56 aa5.48□□□□□ -1.53
UFD1-209ENST00000489406 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
UFD1-209ENST00000489406 MUC5ACP98088 5654 aa5.48□□□□□ -1.53
UFD1-209ENST00000489406 M0QZ58 72 aa5.47□□□□□ -1.53
UFD1-209ENST00000489406 PSMB2P49721 201 aa5.46□□□□□ -1.54
UFD1-209ENST00000489406 CASC2Q6XLA1 102 aa5.46□□□□□ -1.54
UFD1-209ENST00000489406 A0A1B0GV90 55 aa5.45□□□□□ -1.54
UFD1-209ENST00000489406 NDUFC1O43677 76 aa5.45□□□□□ -1.54
UFD1-209ENST00000489406 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
UFD1-209ENST00000489406 PAM16Q9Y3D7 125 aa5.45□□□□□ -1.54
UFD1-209ENST00000489406 COA6Q5JTJ3 125 aaKnown RBP5.42□□□□□ -1.54
UFD1-209ENST00000489406 MT1MQ8N339 61 aa5.42□□□□□ -1.54
UFD1-209ENST00000489406 M0R143 59 aa5.41□□□□□ -1.54
UFD1-209ENST00000489406 PYY3Q5JQD4 70 aa5.41□□□□□ -1.54
UFD1-209ENST00000489406 DLEU1O43261 78 aa5.4□□□□□ -1.54
UFD1-209ENST00000489406 COX6CP09669 75 aa5.4□□□□□ -1.54
UFD1-209ENST00000489406 COX8AP10176 69 aa5.4□□□□□ -1.54
UFD1-209ENST00000489406 HIST3H2BBQ8N257 126 aa5.4□□□□□ -1.54
UFD1-209ENST00000489406 BAALC-AS2P0C853 105 aa5.38□□□□□ -1.55
UFD1-209ENST00000489406 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
UFD1-209ENST00000489406 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
UFD1-209ENST00000489406 LOC110117498A0A087WWA1 95 aa5.37□□□□□ -1.55
UFD1-209ENST00000489406 P0C880 135 aa5.36□□□□□ -1.55
UFD1-209ENST00000489406 Q8N9L7 120 aa5.35□□□□□ -1.55
UFD1-209ENST00000489406 FXYD2P54710 66 aa5.34□□□□□ -1.55
UFD1-209ENST00000489406 HIGD1BQ9P298 99 aa5.34□□□□□ -1.55
UFD1-209ENST00000489406 COL5A1-AS1Q5SY13 56 aa5.32□□□□□ -1.56
UFD1-209ENST00000489406 HIST1H2BLQ99880 126 aa5.31□□□□□ -1.56
UFD1-209ENST00000489406 JMJD7-PLA2G4BH0Y9G9 81 aa5.3□□□□□ -1.56
UFD1-209ENST00000489406 BPY2O14599 106 aa5.3□□□□□ -1.56
UFD1-209ENST00000489406 K7ERJ3 54 aa5.29□□□□□ -1.56
UFD1-209ENST00000489406 C14orf132Q9NPU4 83 aa5.29□□□□□ -1.56
UFD1-209ENST00000489406 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
UFD1-209ENST00000489406 C20orf197Q8N268 126 aa5.26□□□□□ -1.57
UFD1-209ENST00000489406 K7EP34 96 aa5.25□□□□□ -1.57
UFD1-209ENST00000489406 K7ERU9 68 aa5.25□□□□□ -1.57
UFD1-209ENST00000489406 SCGB1C2P0DMR2 95 aa5.23□□□□□ -1.57
UFD1-209ENST00000489406 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
UFD1-209ENST00000489406 CYP4F30PQ9H0H9 118 aa5.23□□□□□ -1.57
UFD1-209ENST00000489406 V9GYY9 64 aa5.23□□□□□ -1.57
UFD1-209ENST00000489406 BATFQ16520 125 aa5.21□□□□□ -1.58
UFD1-209ENST00000489406 UQCR10Q9UDW1 63 aa5.21□□□□□ -1.58
UFD1-209ENST00000489406 MT1LQ93083 61 aa5.19□□□□□ -1.58
UFD1-209ENST00000489406 VAMP8Q9BV40 100 aa5.19□□□□□ -1.58
UFD1-209ENST00000489406 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
UFD1-209ENST00000489406 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
UFD1-209ENST00000489406 NAA38Q9BRA0 125 aaKnown RBP5.15□□□□□ -1.59
UFD1-209ENST00000489406 MT-ATP8P03928 68 aa5.12□□□□□ -1.59
UFD1-209ENST00000489406 A0A1W2PPM0 123 aa5.11□□□□□ -1.59
UFD1-209ENST00000489406 GTF2H5Q6ZYL4 71 aa5.11□□□□□ -1.59
UFD1-209ENST00000489406 J3QR89 54 aa5.1□□□□□ -1.59
UFD1-209ENST00000489406 ACYP1P07311 99 aa5.1□□□□□ -1.59
UFD1-209ENST00000489406 SPATA45Q537H7 98 aa5.1□□□□□ -1.59
UFD1-209ENST00000489406 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
UFD1-209ENST00000489406 ATXN8Q156A1 80 aa5.09□□□□□ -1.59
UFD1-209ENST00000489406 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
UFD1-209ENST00000489406 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
UFD1-209ENST00000489406 TAX1BP3O14907 124 aa5.03□□□□□ -1.6
UFD1-209ENST00000489406 HSD52Q0P140 79 aa5.02□□□□□ -1.61
UFD1-209ENST00000489406 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
UFD1-209ENST00000489406 A0A0D9SG42 100 aa5.01□□□□□ -1.61
UFD1-209ENST00000489406 LOC101927531A0A1B0GV80 90 aa5□□□□□ -1.61
UFD1-209ENST00000489406 F8W1H4 67 aa4.97□□□□□ -1.61
UFD1-209ENST00000489406 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.62
UFD1-209ENST00000489406 SPCS1Q9Y6A9 102 aa4.92□□□□□ -1.62
UFD1-209ENST00000489406 FAM240AA0A1B0GVK7 77 aa4.87□□□□□ -1.63
UFD1-209ENST00000489406 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
UFD1-209ENST00000489406 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
UFD1-209ENST00000489406 ANAPC13Q9BS18 74 aa4.84□□□□□ -1.63
UFD1-209ENST00000489406 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
UFD1-209ENST00000489406 PRO0461Q9UI25 63 aa4.79□□□□□ -1.64
UFD1-209ENST00000489406 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
UFD1-209ENST00000489406 ETDBQ3ZM63 59 aa4.78□□□□□ -1.64
UFD1-209ENST00000489406 OCR1Q9BZK8 76 aa4.77□□□□□ -1.65
UFD1-209ENST00000489406 SMIM20Q8N5G0 67 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms