RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CLEC2BQ92478 149 aa4.28□□□□□ -1.72
SSBP1-212ENST00000489378 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
SSBP1-212ENST00000489378 A0A0B4J2C4 111 aa4.26□□□□□ -1.73
SSBP1-212ENST00000489378 Q6JHZ5 121 aa4.26□□□□□ -1.73
SSBP1-212ENST00000489378 COX7CP15954 63 aa4.25□□□□□ -1.73
SSBP1-212ENST00000489378 SMIM11BQ8TCY0 68 aa4.25□□□□□ -1.73
SSBP1-212ENST00000489378 A0A1B0GVX0 72 aa4.24□□□□□ -1.73
SSBP1-212ENST00000489378 A6NED7 52 aa4.24□□□□□ -1.73
SSBP1-212ENST00000489378 SPRR2EP22531 72 aa4.24□□□□□ -1.73
SSBP1-212ENST00000489378 SPRR2BP35325 72 aa4.24□□□□□ -1.73
SSBP1-212ENST00000489378 SPRR2AP35326 72 aa4.24□□□□□ -1.73
SSBP1-212ENST00000489378 MT1BP07438 61 aa4.23□□□□□ -1.73
SSBP1-212ENST00000489378 PRO1854Q9UHT4 67 aa4.22□□□□□ -1.73
SSBP1-212ENST00000489378 KRTAP10-5P60370 271 aa4.21□□□□□ -1.73
SSBP1-212ENST00000489378 DSCR8Q96T75 97 aa4.21□□□□□ -1.73
SSBP1-212ENST00000489378 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
SSBP1-212ENST00000489378 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
SSBP1-212ENST00000489378 H3BUT2 72 aa4.18□□□□□ -1.74
SSBP1-212ENST00000489378 ATP5EP56381 51 aaPredicted RBP4.18□□□□□ -1.74
SSBP1-212ENST00000489378 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
SSBP1-212ENST00000489378 MT3P25713 68 aa4.17□□□□□ -1.74
SSBP1-212ENST00000489378 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
SSBP1-212ENST00000489378 LINC00575Q6W349 94 aa4.16□□□□□ -1.74
SSBP1-212ENST00000489378 Q6ZQY7 126 aa4.16□□□□□ -1.74
SSBP1-212ENST00000489378 A0A1W2PNM2 257 aa4.15□□□□□ -1.74
SSBP1-212ENST00000489378 A0A1W2PPM0 123 aa4.15□□□□□ -1.74
SSBP1-212ENST00000489378 SPINK7P58062 85 aa4.15□□□□□ -1.74
SSBP1-212ENST00000489378 Q5VV11 94 aa4.15□□□□□ -1.74
SSBP1-212ENST00000489378 SPCS1Q9Y6A9 102 aa4.13□□□□□ -1.75
SSBP1-212ENST00000489378 A0A087WSZ3 146 aa4.12□□□□□ -1.75
SSBP1-212ENST00000489378 WFDC13Q8IUB5 93 aa4.12□□□□□ -1.75
SSBP1-212ENST00000489378 PRO0461Q9UI25 63 aa4.12□□□□□ -1.75
SSBP1-212ENST00000489378 ATOX1O00244 68 aa4.12□□□□□ -1.75
SSBP1-212ENST00000489378 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
SSBP1-212ENST00000489378 PPDPFLQ8WWR9 84 aa4.12□□□□□ -1.75
SSBP1-212ENST00000489378 SPRR2DP22532 72 aa4.11□□□□□ -1.75
SSBP1-212ENST00000489378 hADV29S1A0JD25 119 aa4.1□□□□□ -1.75
SSBP1-212ENST00000489378 H0YGX0 51 aa4.1□□□□□ -1.75
SSBP1-212ENST00000489378 hDV103S1A0JD37 113 aa4.09□□□□□ -1.75
SSBP1-212ENST00000489378 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
SSBP1-212ENST00000489378 IGKV4-1P06312 121 aa4.08□□□□□ -1.76
SSBP1-212ENST00000489378 RBM3P98179 157 aaKnown RBP4.07□□□□□ -1.76
SSBP1-212ENST00000489378 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.07□□□□□ -1.76
SSBP1-212ENST00000489378 C1orf64Q8NEQ6 169 aa4.07□□□□□ -1.76
SSBP1-212ENST00000489378 TRAV7A0A075B6U4 112 aa4.06□□□□□ -1.76
SSBP1-212ENST00000489378 H3BPC8 53 aa4.06□□□□□ -1.76
SSBP1-212ENST00000489378 CCKP06307 115 aa4.06□□□□□ -1.76
SSBP1-212ENST00000489378 ATXN8Q156A1 80 aa4.06□□□□□ -1.76
SSBP1-212ENST00000489378 ETDBQ3ZM63 59 aa4.06□□□□□ -1.76
SSBP1-212ENST00000489378 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
SSBP1-212ENST00000489378 COX6CP09669 75 aa4.05□□□□□ -1.76
SSBP1-212ENST00000489378 H1FX-AS1Q4G0G2 97 aa4.05□□□□□ -1.76
SSBP1-212ENST00000489378 SPRR2GQ9BYE4 73 aa4.05□□□□□ -1.76
SSBP1-212ENST00000489378 BAALC-AS2P0C853 105 aa4.04□□□□□ -1.76
SSBP1-212ENST00000489378 Q1T7F1 81 aa4.04□□□□□ -1.76
SSBP1-212ENST00000489378 DEFB116Q30KQ4 102 aa4.04□□□□□ -1.76
SSBP1-212ENST00000489378 SERP2Q8N6R1 65 aa4.04□□□□□ -1.76
SSBP1-212ENST00000489378 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
SSBP1-212ENST00000489378 Q6ZQT0 140 aa4.04□□□□□ -1.76
SSBP1-212ENST00000489378 SPANXA2-OT1Q8N9U9 137 aa4.04□□□□□ -1.76
SSBP1-212ENST00000489378 ROMO1P60602 79 aa4.03□□□□□ -1.76
SSBP1-212ENST00000489378 ORMDL1Q9P0S3 153 aa4.03□□□□□ -1.76
SSBP1-212ENST00000489378 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
SSBP1-212ENST00000489378 DNAL4O96015 105 aa4.01□□□□□ -1.77
SSBP1-212ENST00000489378 H3BQ85 93 aa4□□□□□ -1.77
SSBP1-212ENST00000489378 NDUFC1O43677 76 aa4□□□□□ -1.77
SSBP1-212ENST00000489378 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
SSBP1-212ENST00000489378 C14orf132Q9NPU4 83 aa4□□□□□ -1.77
SSBP1-212ENST00000489378 TRBV7-4A0A0J9YYF1 115 aa3.99□□□□□ -1.77
SSBP1-212ENST00000489378 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
SSBP1-212ENST00000489378 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
SSBP1-212ENST00000489378 CASC2Q6XLA1 102 aa3.98□□□□□ -1.77
SSBP1-212ENST00000489378 LINC00472Q9H8W2 130 aa3.98□□□□□ -1.77
SSBP1-212ENST00000489378 LOC110117498A0A087WWA1 95 aa3.95□□□□□ -1.78
SSBP1-212ENST00000489378 Q5W150 140 aa3.95□□□□□ -1.78
SSBP1-212ENST00000489378 CYP4F30PQ9H0H9 118 aa3.95□□□□□ -1.78
SSBP1-212ENST00000489378 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
SSBP1-212ENST00000489378 ACYP1P07311 99 aa3.93□□□□□ -1.78
SSBP1-212ENST00000489378 TMEM254Q8TBM7 123 aa3.92□□□□□ -1.78
SSBP1-212ENST00000489378 HCG22E2RYF7 251 aa3.91□□□□□ -1.78
SSBP1-212ENST00000489378 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
SSBP1-212ENST00000489378 IGKV3D-7A0A0C4DH55 119 aa3.9□□□□□ -1.78
SSBP1-212ENST00000489378 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.78
SSBP1-212ENST00000489378 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
SSBP1-212ENST00000489378 A0A1B0GU33 70 aa3.88□□□□□ -1.79
SSBP1-212ENST00000489378 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
SSBP1-212ENST00000489378 LINC00643Q86TS7 51 aa3.88□□□□□ -1.79
SSBP1-212ENST00000489378 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
SSBP1-212ENST00000489378 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
SSBP1-212ENST00000489378 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
SSBP1-212ENST00000489378 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
SSBP1-212ENST00000489378 H7BZZ5 65 aa3.87□□□□□ -1.79
SSBP1-212ENST00000489378 KLKP1Q107X0 134 aa3.87□□□□□ -1.79
SSBP1-212ENST00000489378 PDE6GP18545 87 aa3.85□□□□□ -1.79
SSBP1-212ENST00000489378 MT1XP80297 61 aa3.84□□□□□ -1.79
SSBP1-212ENST00000489378 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
SSBP1-212ENST00000489378 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
SSBP1-212ENST00000489378 Q8N9L7 120 aa3.81□□□□□ -1.8
SSBP1-212ENST00000489378 KRTAP12-2P59991 146 aa3.8□□□□□ -1.8
SSBP1-212ENST00000489378 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms