RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 FCER1GP30273 86 aa-0.52□□□□□ -2.49
RFC4-213ENST00000489028 DEFB1P60022 68 aa-0.52□□□□□ -2.49
RFC4-213ENST00000489028 CEP295Q9C0D2 2601 aa-0.52□□□□□ -2.49
RFC4-213ENST00000489028 LY75O60449 1722 aa-0.52□□□□□ -2.49
RFC4-213ENST00000489028 ITPR1Q14643 2758 aa-0.53□□□□□ -2.49
RFC4-213ENST00000489028 K7EMI3 77 aa-0.53□□□□□ -2.49
RFC4-213ENST00000489028 CDC42BPAQ5VT25 1732 aa-0.53□□□□□ -2.49
RFC4-213ENST00000489028 SMG1Q96Q15 3661 aaKnown RBP-0.53□□□□□ -2.49
RFC4-213ENST00000489028 IGLV5-48A0A075B6I7 105 aa-0.54□□□□□ -2.5
RFC4-213ENST00000489028 LINC01549A6NIU2 74 aa-0.54□□□□□ -2.5
RFC4-213ENST00000489028 MT1XP80297 61 aa-0.54□□□□□ -2.5
RFC4-213ENST00000489028 NCBP2-AS2Q69YL0 99 aa-0.54□□□□□ -2.5
RFC4-213ENST00000489028 CFAP46Q8IYW2 2715 aa-0.55□□□□□ -2.5
RFC4-213ENST00000489028 MROH1Q8NDA8 1641 aa-0.55□□□□□ -2.5
RFC4-213ENST00000489028 NOP10Q9NPE3 64 aaKnown RBP-0.55□□□□□ -2.5
RFC4-213ENST00000489028 MMP24-AS1A0A0U1RRL7 71 aa-0.56□□□□□ -2.5
RFC4-213ENST00000489028 KRTAP8-1Q8IUC2 63 aa-0.56□□□□□ -2.5
RFC4-213ENST00000489028 MT1EP04732 61 aa-0.58□□□□□ -2.5
RFC4-213ENST00000489028 SFTA3P0C7M3 94 aa-0.58□□□□□ -2.5
RFC4-213ENST00000489028 SERF2P84101 59 aa-0.58□□□□□ -2.5
RFC4-213ENST00000489028 DMXL2Q8TDJ6 3036 aa-0.58□□□□□ -2.5
RFC4-213ENST00000489028 A0A1B0GUL6 1792 aa-0.58□□□□□ -2.5
RFC4-213ENST00000489028 MAST1Q9Y2H9 1570 aa-0.58□□□□□ -2.5
RFC4-213ENST00000489028 EFCAB5A4FU69 1503 aa-0.59□□□□□ -2.5
RFC4-213ENST00000489028 CLASP1Q7Z460 1538 aa-0.59□□□□□ -2.5
RFC4-213ENST00000489028 CSMD2Q7Z408 3487 aa-0.59□□□□□ -2.5
RFC4-213ENST00000489028 TNP1P09430 55 aa-0.59□□□□□ -2.5
RFC4-213ENST00000489028 MT1GP13640 62 aa-0.59□□□□□ -2.5
RFC4-213ENST00000489028 CLPSL2Q6UWE3 100 aa-0.59□□□□□ -2.5
RFC4-213ENST00000489028 MT1LQ93083 61 aa-0.59□□□□□ -2.5
RFC4-213ENST00000489028 ABCA13Q86UQ4 5058 aa-0.6□□□□□ -2.51
RFC4-213ENST00000489028 MADDQ8WXG6 1647 aa-0.6□□□□□ -2.51
RFC4-213ENST00000489028 ATMQ13315 3056 aa-0.61□□□□□ -2.51
RFC4-213ENST00000489028 A0A087WWC5 75 aa-0.61□□□□□ -2.51
RFC4-213ENST00000489028 ZFHX4Q86UP3 3567 aa-0.61□□□□□ -2.51
RFC4-213ENST00000489028 CRYBG3Q68DQ2 2970 aa-0.62□□□□□ -2.51
RFC4-213ENST00000489028 M0R1W7 72 aa-0.62□□□□□ -2.51
RFC4-213ENST00000489028 MT1HL1P0DM35 61 aa-0.62□□□□□ -2.51
RFC4-213ENST00000489028 NMES1Q9C002 83 aa-0.62□□□□□ -2.51
RFC4-213ENST00000489028 TLN1Q9Y490 2541 aaKnown RBP-0.62□□□□□ -2.51
RFC4-213ENST00000489028 CROCC2H7BZ55 1655 aa-0.62□□□□□ -2.51
RFC4-213ENST00000489028 TIAM1Q13009 1591 aa-0.63□□□□□ -2.51
RFC4-213ENST00000489028 ITPR2Q14571 2701 aa-0.63□□□□□ -2.51
RFC4-213ENST00000489028 FAM208AQ9UK61 1670 aaKnown RBP-0.63□□□□□ -2.51
RFC4-213ENST00000489028 TMEM167BQ9NRX6 74 aa-0.64□□□□□ -2.51
RFC4-213ENST00000489028 CFAP54Q96N23 3096 aa-0.64□□□□□ -2.51
RFC4-213ENST00000489028 MYO15AQ9UKN7 3530 aa-0.64□□□□□ -2.51
RFC4-213ENST00000489028 PRUNE2Q8WUY3 3088 aa-0.65□□□□□ -2.51
RFC4-213ENST00000489028 VPS13CQ709C8 3753 aa-0.65□□□□□ -2.51
RFC4-213ENST00000489028 MT1MQ8N339 61 aa-0.65□□□□□ -2.51
RFC4-213ENST00000489028 ABRACLQ9P1F3 81 aa-0.65□□□□□ -2.51
RFC4-213ENST00000489028 ABCA6Q8N139 1617 aa-0.65□□□□□ -2.51
RFC4-213ENST00000489028 FREM2Q5SZK8 3169 aa-0.65□□□□□ -2.51
RFC4-213ENST00000489028 GLI2P10070 1586 aa-0.66□□□□□ -2.51
RFC4-213ENST00000489028 M0QY20 66 aa-0.66□□□□□ -2.52
RFC4-213ENST00000489028 MT2AP02795 61 aa-0.66□□□□□ -2.52
RFC4-213ENST00000489028 ALS2Q96Q42 1657 aa-0.67□□□□□ -2.52
RFC4-213ENST00000489028 LINC01546A6NGU7 62 aa-0.67□□□□□ -2.52
RFC4-213ENST00000489028 BOD1L1Q8NFC6 3051 aa-0.68□□□□□ -2.52
RFC4-213ENST00000489028 M0QZ58 72 aa-0.68□□□□□ -2.52
RFC4-213ENST00000489028 KIF21BO75037 1637 aa-0.68□□□□□ -2.52
RFC4-213ENST00000489028 CCDC180Q9P1Z9 1646 aa-0.68□□□□□ -2.52
RFC4-213ENST00000489028 EEA1Q15075 1411 aa-0.69□□□□□ -2.52
RFC4-213ENST00000489028 DEFB4AO15263 64 aa-0.69□□□□□ -2.52
RFC4-213ENST00000489028 MT1BP07438 61 aa-0.69□□□□□ -2.52
RFC4-213ENST00000489028 LINC00308Q8TCZ7 52 aa-0.69□□□□□ -2.52
RFC4-213ENST00000489028 KAAG1Q9UBP8 84 aa-0.69□□□□□ -2.52
RFC4-213ENST00000489028 PREX2Q70Z35 1606 aa-0.69□□□□□ -2.52
RFC4-213ENST00000489028 FRYLO94915 3013 aa-0.7□□□□□ -2.52
RFC4-213ENST00000489028 IGIPA6NJ69 53 aa-0.7□□□□□ -2.52
RFC4-213ENST00000489028 A8MTW9 85 aa-0.7□□□□□ -2.52
RFC4-213ENST00000489028 WDFY3Q8IZQ1 3526 aa-0.71□□□□□ -2.52
RFC4-213ENST00000489028 PCNTO95613 3336 aa-0.71□□□□□ -2.52
RFC4-213ENST00000489028 SPART-AS1P0CW21 52 aa-0.71□□□□□ -2.52
RFC4-213ENST00000489028 S100ZQ8WXG8 99 aa-0.71□□□□□ -2.52
RFC4-213ENST00000489028 EFCAB6Q5THR3 1501 aa-0.72□□□□□ -2.52
RFC4-213ENST00000489028 SMIM5Q71RC9 77 aa-0.72□□□□□ -2.52
RFC4-213ENST00000489028 CEP350Q5VT06 3117 aa-0.72□□□□□ -2.53
RFC4-213ENST00000489028 LMO7Q8WWI1 1683 aa-0.72□□□□□ -2.53
RFC4-213ENST00000489028 SMIM27A0A1W2PRY6 76 aa-0.73□□□□□ -2.53
RFC4-213ENST00000489028 SPEGQ15772 3267 aa-0.73□□□□□ -2.53
RFC4-213ENST00000489028 ABCA10Q8WWZ4 1543 aa-0.74□□□□□ -2.53
RFC4-213ENST00000489028 H0YGX0 51 aa-0.74□□□□□ -2.53
RFC4-213ENST00000489028 WFDC10BQ8IUB3 73 aa-0.74□□□□□ -2.53
RFC4-213ENST00000489028 LEAP2Q969E1 77 aa-0.74□□□□□ -2.53
RFC4-213ENST00000489028 DMDP11532 3685 aa-0.75□□□□□ -2.53
RFC4-213ENST00000489028 KRTAP20-1Q3LI63 56 aa-0.75□□□□□ -2.53
RFC4-213ENST00000489028 SZT2Q5T011 3432 aa-0.75□□□□□ -2.53
RFC4-213ENST00000489028 CPS1P31327 1500 aa-0.75□□□□□ -2.53
RFC4-213ENST00000489028 WDFY4Q6ZS81 3184 aa-0.76□□□□□ -2.53
RFC4-213ENST00000489028 SMIM31A0A1B0GVY4 71 aa-0.76□□□□□ -2.53
RFC4-213ENST00000489028 POLR2KP53803 58 aaKnown RBP-0.76□□□□□ -2.53
RFC4-213ENST00000489028 UGGT1Q9NYU2 1555 aa-0.76□□□□□ -2.53
RFC4-213ENST00000489028 CEP250Q9BV73 2442 aa-0.76□□□□□ -2.53
RFC4-213ENST00000489028 MROH2AA6NES4 1674 aa-0.77□□□□□ -2.53
RFC4-213ENST00000489028 SYCP2Q9BX26 1530 aa-0.77□□□□□ -2.53
RFC4-213ENST00000489028 DEFB136Q30KP8 78 aa-0.77□□□□□ -2.53
RFC4-213ENST00000489028 AGLP35573 1532 aa-0.78□□□□□ -2.53
RFC4-213ENST00000489028 IQGAP1P46940 1657 aa-0.78□□□□□ -2.53
RFC4-213ENST00000489028 TFF3Q07654 80 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms