RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 S100A6P06703 90 aa0.62□□□□□ -2.31
ITGB1-214ENST00000488427 IGLC3P0DOY3 106 aa0.62□□□□□ -2.31
ITGB1-214ENST00000488427 PPP1R1CQ8WVI7 109 aa0.62□□□□□ -2.31
ITGB1-214ENST00000488427 PRELID3AQ96N28 172 aa0.62□□□□□ -2.31
ITGB1-214ENST00000488427 TRBV7-6A0A0J9YX20 115 aa0.61□□□□□ -2.31
ITGB1-214ENST00000488427 K7EMI3 77 aa0.61□□□□□ -2.31
ITGB1-214ENST00000488427 INE1O15225 51 aa0.61□□□□□ -2.31
ITGB1-214ENST00000488427 MPC2O95563 127 aa0.61□□□□□ -2.31
ITGB1-214ENST00000488427 TMEM170BQ5T4T1 132 aa0.61□□□□□ -2.31
ITGB1-214ENST00000488427 MRPL54Q6P161 138 aaKnown RBP0.61□□□□□ -2.31
ITGB1-214ENST00000488427 Q8N8P6 123 aa0.61□□□□□ -2.31
ITGB1-214ENST00000488427 hDV103S1A0JD37 113 aa0.6□□□□□ -2.31
ITGB1-214ENST00000488427 ADCYAP1P18509 176 aa0.6□□□□□ -2.31
ITGB1-214ENST00000488427 SPATA8Q6RVD6 105 aa0.6□□□□□ -2.31
ITGB1-214ENST00000488427 SPANXDQ9BXN6 97 aa0.6□□□□□ -2.31
ITGB1-214ENST00000488427 OSTCQ9NRP0 149 aa0.6□□□□□ -2.31
ITGB1-214ENST00000488427 TRAV12-1A0A0B4J245 112 aa0.59□□□□□ -2.31
ITGB1-214ENST00000488427 MYMXA0A1B0GTQ4 84 aa0.59□□□□□ -2.31
ITGB1-214ENST00000488427 NPC2P61916 151 aa0.59□□□□□ -2.31
ITGB1-214ENST00000488427 C20orf197Q8N268 126 aa0.59□□□□□ -2.31
ITGB1-214ENST00000488427 MANBALQ9NQG1 85 aa0.59□□□□□ -2.31
ITGB1-214ENST00000488427 PDE6DO43924 150 aa0.58□□□□□ -2.32
ITGB1-214ENST00000488427 HBDP02042 147 aa0.58□□□□□ -2.32
ITGB1-214ENST00000488427 S100A8P05109 93 aa0.58□□□□□ -2.32
ITGB1-214ENST00000488427 Q6ZQY7 126 aa0.58□□□□□ -2.32
ITGB1-214ENST00000488427 SNHG12Q9BXW3 62 aa0.58□□□□□ -2.32
ITGB1-214ENST00000488427 GNG13Q9P2W3 67 aa0.58□□□□□ -2.32
ITGB1-214ENST00000488427 LAMTOR2Q9Y2Q5 125 aa0.58□□□□□ -2.32
ITGB1-214ENST00000488427 A0A087WVE0 104 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 LINC01546A6NGU7 62 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 LINC01549A6NIU2 74 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 HCG22E2RYF7 251 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 LYRM1O43325 122 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 MT-ATP8P03928 68 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 TRIQKQ629K1 86 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 LINC00575Q6W349 94 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 FAM213BQ8TBF2 198 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 HIST1H2BLQ99880 126 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 C14orf132Q9NPU4 83 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 SPANXCQ9NY87 97 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 NAT8BQ9UHF3 227 aa0.57□□□□□ -2.32
ITGB1-214ENST00000488427 NDUFC1O43677 76 aa0.55□□□□□ -2.32
ITGB1-214ENST00000488427 NDUFB1O75438 58 aa0.55□□□□□ -2.32
ITGB1-214ENST00000488427 S100A5P33763 92 aa0.55□□□□□ -2.32
ITGB1-214ENST00000488427 MUSTN1Q8IVN3 82 aa0.55□□□□□ -2.32
ITGB1-214ENST00000488427 PPDPFLQ8WWR9 84 aa0.55□□□□□ -2.32
ITGB1-214ENST00000488427 V9GYH0 126 aa0.55□□□□□ -2.32
ITGB1-214ENST00000488427 hADV29S1A0JD25 119 aa0.53□□□□□ -2.32
ITGB1-214ENST00000488427 TIMM17BO60830 172 aa0.53□□□□□ -2.32
ITGB1-214ENST00000488427 BAGE3Q86Y29 109 aa0.53□□□□□ -2.32
ITGB1-214ENST00000488427 CDC42SE1Q9NRR8 79 aa0.53□□□□□ -2.32
ITGB1-214ENST00000488427 V9GYV3 84 aa0.53□□□□□ -2.32
ITGB1-214ENST00000488427 UMAD1C9J7I0 102 aa0.52□□□□□ -2.33
ITGB1-214ENST00000488427 J3KT08 172 aa0.52□□□□□ -2.33
ITGB1-214ENST00000488427 TMEM254Q8TBM7 123 aa0.52□□□□□ -2.33
ITGB1-214ENST00000488427 MRPL34Q9BQ48 92 aaKnown RBP0.52□□□□□ -2.33
ITGB1-214ENST00000488427 TRBV7-4A0A0J9YYF1 115 aa0.51□□□□□ -2.33
ITGB1-214ENST00000488427 A0A1B0GV72 72 aa0.51□□□□□ -2.33
ITGB1-214ENST00000488427 SMIM27A0A1W2PRY6 76 aa0.51□□□□□ -2.33
ITGB1-214ENST00000488427 LINC00308Q8TCZ7 52 aa0.51□□□□□ -2.33
ITGB1-214ENST00000488427 Q9H521 79 aa0.51□□□□□ -2.33
ITGB1-214ENST00000488427 H3BMG7 143 aa0.5□□□□□ -2.33
ITGB1-214ENST00000488427 TRACP01848 142 aa0.5□□□□□ -2.33
ITGB1-214ENST00000488427 C12orf57Q99622 126 aa0.5□□□□□ -2.33
ITGB1-214ENST00000488427 TRGC2P03986 189 aa0.49□□□□□ -2.33
ITGB1-214ENST00000488427 SMIM11BQ8TCY0 68 aa0.49□□□□□ -2.33
ITGB1-214ENST00000488427 SMIM7Q9BQ49 75 aa0.49□□□□□ -2.33
ITGB1-214ENST00000488427 BATF3Q9NR55 127 aa0.49□□□□□ -2.33
ITGB1-214ENST00000488427 ORMDL1Q9P0S3 153 aa0.49□□□□□ -2.33
ITGB1-214ENST00000488427 SMCO4Q9NRQ5 59 aa0.48□□□□□ -2.33
ITGB1-214ENST00000488427 MMP24-AS1A0A0U1RRL7 71 aa0.47□□□□□ -2.33
ITGB1-214ENST00000488427 TSTD3H0UI37 97 aa0.47□□□□□ -2.33
ITGB1-214ENST00000488427 DNAL4O96015 105 aa0.47□□□□□ -2.33
ITGB1-214ENST00000488427 CCKP06307 115 aa0.47□□□□□ -2.33
ITGB1-214ENST00000488427 SMIM20Q8N5G0 67 aa0.47□□□□□ -2.33
ITGB1-214ENST00000488427 TMEM256-PLSCR3K7ERE1 68 aa0.46□□□□□ -2.34
ITGB1-214ENST00000488427 TAX1BP3O14907 124 aa0.46□□□□□ -2.34
ITGB1-214ENST00000488427 HIST1H2BKO60814 126 aa0.46□□□□□ -2.34
ITGB1-214ENST00000488427 HIST1H2BJP06899 126 aa0.46□□□□□ -2.34
ITGB1-214ENST00000488427 TCTE3Q8IZS6 198 aa0.46□□□□□ -2.34
ITGB1-214ENST00000488427 ROMO1P60602 79 aa0.45□□□□□ -2.34
ITGB1-214ENST00000488427 HSPB8Q9UJY1 196 aa0.45□□□□□ -2.34
ITGB1-214ENST00000488427 A0A1B0GX51 115 aa0.44□□□□□ -2.34
ITGB1-214ENST00000488427 K7EP34 96 aa0.44□□□□□ -2.34
ITGB1-214ENST00000488427 SCGB1A1P11684 91 aa0.44□□□□□ -2.34
ITGB1-214ENST00000488427 IFITM1P13164 125 aa0.44□□□□□ -2.34
ITGB1-214ENST00000488427 COX7CP15954 63 aa0.44□□□□□ -2.34
ITGB1-214ENST00000488427 ADIRFQ15847 76 aa0.44□□□□□ -2.34
ITGB1-214ENST00000488427 VPS25Q9BRG1 176 aa0.44□□□□□ -2.34
ITGB1-214ENST00000488427 K7ERJ3 54 aa0.43□□□□□ -2.34
ITGB1-214ENST00000488427 ARPC5O15511 151 aa0.43□□□□□ -2.34
ITGB1-214ENST00000488427 DPM2O94777 84 aa0.43□□□□□ -2.34
ITGB1-214ENST00000488427 FABP2P12104 132 aa0.43□□□□□ -2.34
ITGB1-214ENST00000488427 FABP4P15090 132 aa0.43□□□□□ -2.34
ITGB1-214ENST00000488427 F8W1H4 67 aa0.42□□□□□ -2.34
ITGB1-214ENST00000488427 SNCGO76070 127 aa0.42□□□□□ -2.34
ITGB1-214ENST00000488427 PLNP26678 52 aa0.42□□□□□ -2.34
ITGB1-214ENST00000488427 PMCHL1Q16048 86 aa0.42□□□□□ -2.34
ITGB1-214ENST00000488427 CASC2Q6XLA1 102 aa0.42□□□□□ -2.34
ITGB1-214ENST00000488427 COPS9Q8WXC6 57 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms