RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 CSMD3Q7Z407 3707 aa3.4□□□□□ -1.86
MCF2L2-212ENST00000488149 ALMS1Q8TCU4 4167 aa3.34□□□□□ -1.87
MCF2L2-212ENST00000488149 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
MCF2L2-212ENST00000488149 KRTAP4-5Q9BYR2 181 aa3.32□□□□□ -1.88
MCF2L2-212ENST00000488149 AKAP9Q99996 3911 aa3.27□□□□□ -1.89
MCF2L2-212ENST00000488149 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
MCF2L2-212ENST00000488149 DNAH10Q8IVF4 4471 aa3.23□□□□□ -1.89
MCF2L2-212ENST00000488149 DNAH2Q9P225 4427 aa3.23□□□□□ -1.89
MCF2L2-212ENST00000488149 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
MCF2L2-212ENST00000488149 KRTAP8-1Q8IUC2 63 aa3.22□□□□□ -1.89
MCF2L2-212ENST00000488149 DNAH11Q96DT5 4516 aa3.2□□□□□ -1.9
MCF2L2-212ENST00000488149 KRTAP4-1Q9BYQ7 146 aa3.2□□□□□ -1.9
MCF2L2-212ENST00000488149 DNAH9Q9NYC9 4486 aa3.19□□□□□ -1.9
MCF2L2-212ENST00000488149 DNAH5Q8TE73 4624 aa3.18□□□□□ -1.9
MCF2L2-212ENST00000488149 ZNF469Q96JG9 3925 aaPredicted RBP3.17□□□□□ -1.9
MCF2L2-212ENST00000488149 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.9
MCF2L2-212ENST00000488149 MT2AP02795 61 aa3.13□□□□□ -1.91
MCF2L2-212ENST00000488149 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
MCF2L2-212ENST00000488149 DNAH8Q96JB1 4490 aa3.13□□□□□ -1.91
MCF2L2-212ENST00000488149 MT1HP80294 61 aa3.12□□□□□ -1.91
MCF2L2-212ENST00000488149 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
MCF2L2-212ENST00000488149 FAT1Q14517 4588 aa3.12□□□□□ -1.91
MCF2L2-212ENST00000488149 DNAH17Q9UFH2 4485 aa3.11□□□□□ -1.91
MCF2L2-212ENST00000488149 PLECQ15149 4684 aaKnown RBP3.1□□□□□ -1.91
MCF2L2-212ENST00000488149 DNAH3Q8TD57 4116 aa3.08□□□□□ -1.92
MCF2L2-212ENST00000488149 VPS13DQ5THJ4 4388 aa3.08□□□□□ -1.92
MCF2L2-212ENST00000488149 MT1FP04733 61 aa3.06□□□□□ -1.92
MCF2L2-212ENST00000488149 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
MCF2L2-212ENST00000488149 ANK2Q01484 3957 aa3.02□□□□□ -1.93
MCF2L2-212ENST00000488149 DYNC2H1Q8NCM8 4307 aaKnown RBP3.01□□□□□ -1.93
MCF2L2-212ENST00000488149 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
MCF2L2-212ENST00000488149 VPS13BQ7Z7G8 4022 aa2.99□□□□□ -1.93
MCF2L2-212ENST00000488149 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
MCF2L2-212ENST00000488149 FAT2Q9NYQ8 4349 aa2.98□□□□□ -1.93
MCF2L2-212ENST00000488149 KRTAP19-8Q3LI54 63 aa2.97□□□□□ -1.93
MCF2L2-212ENST00000488149 KRTAP19-1Q8IUB9 90 aa2.97□□□□□ -1.93
MCF2L2-212ENST00000488149 SACSQ9NZJ4 4579 aa2.97□□□□□ -1.93
MCF2L2-212ENST00000488149 STARD9Q9P2P6 4700 aa2.95□□□□□ -1.94
MCF2L2-212ENST00000488149 DYNC1H1Q14204 4646 aaKnown RBP2.94□□□□□ -1.94
MCF2L2-212ENST00000488149 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
MCF2L2-212ENST00000488149 APOBP04114 4563 aaKnown RBP2.93□□□□□ -1.94
MCF2L2-212ENST00000488149 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
MCF2L2-212ENST00000488149 KMT2AQ03164 3969 aa2.92□□□□□ -1.94
MCF2L2-212ENST00000488149 FRAS1Q86XX4 4008 aa2.91□□□□□ -1.94
MCF2L2-212ENST00000488149 MT1XP80297 61 aa2.9□□□□□ -1.95
MCF2L2-212ENST00000488149 LYSTQ99698 3801 aa2.89□□□□□ -1.95
MCF2L2-212ENST00000488149 DNAH6Q9C0G6 4158 aa2.88□□□□□ -1.95
MCF2L2-212ENST00000488149 CMYA5Q8N3K9 4069 aa2.88□□□□□ -1.95
MCF2L2-212ENST00000488149 DNAH7Q8WXX0 4024 aa2.87□□□□□ -1.95
MCF2L2-212ENST00000488149 LCE3BQ5TA77 95 aa2.86□□□□□ -1.95
MCF2L2-212ENST00000488149 LRP1Q07954 4544 aaKnown RBP2.85□□□□□ -1.95
MCF2L2-212ENST00000488149 HECTD4Q9Y4D8 3996 aa2.85□□□□□ -1.95
MCF2L2-212ENST00000488149 MYCBP2O75592 4640 aa2.85□□□□□ -1.95
MCF2L2-212ENST00000488149 RYR1P21817 5038 aa2.84□□□□□ -1.96
MCF2L2-212ENST00000488149 PRKDCP78527 4128 aaKnown RBP2.84□□□□□ -1.96
MCF2L2-212ENST00000488149 MT1BP07438 61 aa2.83□□□□□ -1.96
MCF2L2-212ENST00000488149 MT1GP13640 62 aa2.8□□□□□ -1.96
MCF2L2-212ENST00000488149 DNHD1Q96M86 4753 aa2.79□□□□□ -1.96
MCF2L2-212ENST00000488149 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
MCF2L2-212ENST00000488149 FAT3Q8TDW7 4589 aa2.76□□□□□ -1.97
MCF2L2-212ENST00000488149 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
MCF2L2-212ENST00000488149 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
MCF2L2-212ENST00000488149 KRTAP4-8A0A0G2JLE6 195 aa2.73□□□□□ -1.97
MCF2L2-212ENST00000488149 KRTAP4-8Q9BYQ9 185 aa2.73□□□□□ -1.97
MCF2L2-212ENST00000488149 KRTAP17-1Q9BYP8 105 aa2.7□□□□□ -1.98
MCF2L2-212ENST00000488149 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
MCF2L2-212ENST00000488149 SPRR2EP22531 72 aa2.69□□□□□ -1.98
MCF2L2-212ENST00000488149 SPRR2BP35325 72 aa2.69□□□□□ -1.98
MCF2L2-212ENST00000488149 SPRR2AP35326 72 aa2.69□□□□□ -1.98
MCF2L2-212ENST00000488149 MT1LQ93083 61 aa2.68□□□□□ -1.98
MCF2L2-212ENST00000488149 LCE2CQ5TA81 110 aa2.68□□□□□ -1.98
MCF2L2-212ENST00000488149 RYR3Q15413 4870 aa2.67□□□□□ -1.98
MCF2L2-212ENST00000488149 PKD1P98161 4303 aa2.65□□□□□ -1.98
MCF2L2-212ENST00000488149 LCE2BO14633 110 aa2.65□□□□□ -1.99
MCF2L2-212ENST00000488149 LRP2P98164 4655 aa2.64□□□□□ -1.99
MCF2L2-212ENST00000488149 KRTAP4-7Q9BYR0 210 aa2.63□□□□□ -1.99
MCF2L2-212ENST00000488149 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
MCF2L2-212ENST00000488149 MT1EP04732 61 aa2.61□□□□□ -1.99
MCF2L2-212ENST00000488149 SPRR2DP22532 72 aa2.6□□□□□ -1.99
MCF2L2-212ENST00000488149 HSPG2P98160 4391 aa2.6□□□□□ -1.99
MCF2L2-212ENST00000488149 RYR2Q92736 4967 aa2.59□□□□□ -1.99
MCF2L2-212ENST00000488149 KIAA1109Q2LD37 5005 aa2.58□□□□□ -2
MCF2L2-212ENST00000488149 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
MCF2L2-212ENST00000488149 PRM1P04553 51 aa2.57□□□□□ -2
MCF2L2-212ENST00000488149 KRTAP19-2Q3LHN2 52 aa2.57□□□□□ -2
MCF2L2-212ENST00000488149 PKHD1P08F94 4074 aa2.54□□□□□ -2
MCF2L2-212ENST00000488149 MT1MQ8N339 61 aa2.52□□□□□ -2.01
MCF2L2-212ENST00000488149 PKHD1L1Q86WI1 4243 aa2.51□□□□□ -2.01
MCF2L2-212ENST00000488149 MT3P25713 68 aa2.5□□□□□ -2.01
MCF2L2-212ENST00000488149 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
MCF2L2-212ENST00000488149 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
MCF2L2-212ENST00000488149 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
MCF2L2-212ENST00000488149 MUC17Q685J3 4493 aa2.49□□□□□ -2.01
MCF2L2-212ENST00000488149 LPAP08519 4548 aa2.49□□□□□ -2.01
MCF2L2-212ENST00000488149 KMT2CQ8NEZ4 4911 aaKnown RBP2.49□□□□□ -2.01
MCF2L2-212ENST00000488149 TNXBP22105 4242 aa2.47□□□□□ -2.01
MCF2L2-212ENST00000488149 HERC2O95714 4834 aa2.47□□□□□ -2.01
MCF2L2-212ENST00000488149 LOC100996750A0A140TA64 210 aa2.47□□□□□ -2.01
MCF2L2-212ENST00000488149 HERC1Q15751 4861 aa2.46□□□□□ -2.02
MCF2L2-212ENST00000488149 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms