RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 DNAH1Q9P2D7 4330 aa0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 NBEAL1Q6ZS30 2694 aa0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 DNAH2Q9P225 4427 aa0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 PKHD1L1Q86WI1 4243 aa0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 PRKDCP78527 4128 aaKnown RBP0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 UTP20O75691 2785 aaKnown RBP0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 LRP1BQ9NZR2 4599 aa0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 A0A096LPF7 62 aa0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 KRTAP19-5Q3LI72 72 aa0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 DNAH3Q8TD57 4116 aa0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 HECTD4Q9Y4D8 3996 aa0.1□□□□□ -2.39
HMGB1P36-201ENST00000487709 CMYA5Q8N3K9 4069 aa0.09□□□□□ -2.39
HMGB1P36-201ENST00000487709 CUBNO60494 3623 aa0.09□□□□□ -2.39
HMGB1P36-201ENST00000487709 FASNP49327 2511 aaKnown RBP0.09□□□□□ -2.39
HMGB1P36-201ENST00000487709 PDZD2O15018 2839 aa0.09□□□□□ -2.39
HMGB1P36-201ENST00000487709 ZANQ9Y493 2812 aa0.09□□□□□ -2.39
HMGB1P36-201ENST00000487709 MT1HP80294 61 aa0.09□□□□□ -2.4
HMGB1P36-201ENST00000487709 HTTP42858 3142 aa0.09□□□□□ -2.4
HMGB1P36-201ENST00000487709 VPS13DQ5THJ4 4388 aa0.09□□□□□ -2.4
HMGB1P36-201ENST00000487709 SRRM2Q9UQ35 2752 aaKnown RBP0.09□□□□□ -2.4
HMGB1P36-201ENST00000487709 PKD1P98161 4303 aa0.09□□□□□ -2.4
HMGB1P36-201ENST00000487709 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 HIVEP1P15822 2718 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 CEP250Q9BV73 2442 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 DYNC2H1Q8NCM8 4307 aaKnown RBP0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 SPTAN1Q13813 2472 aaKnown RBP0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 DNAH11Q96DT5 4516 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 SYNE2Q8WXH0 6885 aaKnown RBP0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 CELSR3Q9NYQ7 3312 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 MT1EP04732 61 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 HTN3P15516 51 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 KRTAP19-8Q3LI54 63 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 KRTAP19-7Q3SYF9 63 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 BSNQ9UPA5 3926 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 ZZEF1O43149 2961 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 DNAH9Q9NYC9 4486 aa0.08□□□□□ -2.4
HMGB1P36-201ENST00000487709 DMXL1Q9Y485 3027 aa0.07□□□□□ -2.4
HMGB1P36-201ENST00000487709 COL12A1Q99715 3063 aa0.07□□□□□ -2.4
HMGB1P36-201ENST00000487709 DNAH6Q9C0G6 4158 aa0.07□□□□□ -2.4
HMGB1P36-201ENST00000487709 KRTAP6-1Q3LI64 71 aa0.07□□□□□ -2.4
HMGB1P36-201ENST00000487709 DEFB108BQ8NET1 73 aa0.07□□□□□ -2.4
HMGB1P36-201ENST00000487709 USP9YO00507 2555 aaPredicted RBP0.07□□□□□ -2.4
HMGB1P36-201ENST00000487709 NBEAL2Q6ZNJ1 2754 aa0.07□□□□□ -2.4
HMGB1P36-201ENST00000487709 FLGP20930 4061 aaPredicted RBP0.07□□□□□ -2.4
HMGB1P36-201ENST00000487709 CRYBG3Q68DQ2 2970 aa0.07□□□□□ -2.4
HMGB1P36-201ENST00000487709 MYO18BQ8IUG5 2567 aa0.06□□□□□ -2.4
HMGB1P36-201ENST00000487709 LAMA1P25391 3075 aa0.06□□□□□ -2.4
HMGB1P36-201ENST00000487709 FAT3Q8TDW7 4589 aa0.06□□□□□ -2.4
HMGB1P36-201ENST00000487709 MT1LQ93083 61 aa0.06□□□□□ -2.4
HMGB1P36-201ENST00000487709 COX14Q96I36 57 aa0.06□□□□□ -2.4
HMGB1P36-201ENST00000487709 STAB2Q8WWQ8 2551 aa0.06□□□□□ -2.4
HMGB1P36-201ENST00000487709 DOPEY1Q5JWR5 2465 aa0.06□□□□□ -2.4
HMGB1P36-201ENST00000487709 RELNP78509 3460 aa0.06□□□□□ -2.4
HMGB1P36-201ENST00000487709 FRYQ5TBA9 3013 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 VPS13BQ7Z7G8 4022 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 FSIP2Q5CZC0 6907 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 TACC2O95359 2948 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 CHD7Q9P2D1 2997 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 STATHP02808 62 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 MT1XP80297 61 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 SVEP1Q4LDE5 3571 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 USP9XQ93008 2570 aaPredicted RBP0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 LAMA5O15230 3695 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 DNAH10Q8IVF4 4471 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 SACSQ9NZJ4 4579 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 LYSTQ99698 3801 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 LAMA3Q16787 3333 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 DNAH8Q96JB1 4490 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 MXRA5Q9NR99 2828 aa0.05□□□□□ -2.4
HMGB1P36-201ENST00000487709 SZT2Q5T011 3432 aa0.04□□□□□ -2.4
HMGB1P36-201ENST00000487709 APOBP04114 4563 aaKnown RBP0.04□□□□□ -2.4
HMGB1P36-201ENST00000487709 MGAQ8IWI9 3026 aa0.04□□□□□ -2.4
HMGB1P36-201ENST00000487709 WDR87Q6ZQQ6 2873 aa0.04□□□□□ -2.4
HMGB1P36-201ENST00000487709 DNAH17Q9UFH2 4485 aa0.04□□□□□ -2.4
HMGB1P36-201ENST00000487709 XIRP2A4UGR9 3374 aa0.04□□□□□ -2.4
HMGB1P36-201ENST00000487709 FAT1Q14517 4588 aa0.04□□□□□ -2.4
HMGB1P36-201ENST00000487709 LRP2P98164 4655 aa0.04□□□□□ -2.4
HMGB1P36-201ENST00000487709 NBEAQ8NFP9 2946 aa0.03□□□□□ -2.4
HMGB1P36-201ENST00000487709 PLECQ15149 4684 aaKnown RBP0.03□□□□□ -2.4
HMGB1P36-201ENST00000487709 TLN1Q9Y490 2541 aaKnown RBP0.03□□□□□ -2.4
HMGB1P36-201ENST00000487709 MT1HL1P0DM35 61 aa0.03□□□□□ -2.4
HMGB1P36-201ENST00000487709 CSMD2Q7Z408 3487 aa0.03□□□□□ -2.4
HMGB1P36-201ENST00000487709 ITPR3Q14573 2671 aa0.03□□□□□ -2.4
HMGB1P36-201ENST00000487709 DNAH7Q8WXX0 4024 aa0.03□□□□□ -2.4
HMGB1P36-201ENST00000487709 MACF1Q9UPN3 7388 aaKnown RBP0.03□□□□□ -2.41
HMGB1P36-201ENST00000487709 ITPR1Q14643 2758 aa0.03□□□□□ -2.41
HMGB1P36-201ENST00000487709 SSPOA2VEC9 5147 aa0.03□□□□□ -2.41
HMGB1P36-201ENST00000487709 NBPF19A0A087WUL8 3843 aa0.03□□□□□ -2.41
HMGB1P36-201ENST00000487709 DMXL2Q8TDJ6 3036 aa0.03□□□□□ -2.41
HMGB1P36-201ENST00000487709 MYO9AB2RTY4 2548 aa0.03□□□□□ -2.41
HMGB1P36-201ENST00000487709 ZFHX4Q86UP3 3567 aa0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 NIPBLQ6KC79 2804 aaeCLIP0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 KALRNO60229 2985 aa0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 CSMD1Q96PZ7 3565 aa0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 MT1GP13640 62 aa0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 LOC400499M0QZD8 3231 aa0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 MUC17Q685J3 4493 aa0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 WDFY4Q6ZS81 3184 aa0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 HMCN2Q8NDA2 5059 aa0.02□□□□□ -2.41
HMGB1P36-201ENST00000487709 SPENQ96T58 3664 aaKnown RBP0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms