RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 H0YGX0 51 aa2.04□□□□□ -2.08
PTPN4-210ENST00000485247 MRPL34Q9BQ48 92 aaKnown RBP2.04□□□□□ -2.08
PTPN4-210ENST00000485247 KRTAP19-3Q7Z4W3 81 aa2.03□□□□□ -2.08
PTPN4-210ENST00000485247 ATOH7Q8N100 152 aa2.03□□□□□ -2.08
PTPN4-210ENST00000485247 C1orf64Q8NEQ6 169 aa2.03□□□□□ -2.08
PTPN4-210ENST00000485247 K7EQZ3 153 aa2.02□□□□□ -2.09
PTPN4-210ENST00000485247 APOC3P02656 99 aa2.02□□□□□ -2.09
PTPN4-210ENST00000485247 TMEM254Q8TBM7 123 aa2.02□□□□□ -2.09
PTPN4-210ENST00000485247 CYSTM1Q9H1C7 97 aa2.02□□□□□ -2.09
PTPN4-210ENST00000485247 MMP24-AS1A0A0U1RRL7 71 aa2.01□□□□□ -2.09
PTPN4-210ENST00000485247 A0A1B0GX51 115 aa2.01□□□□□ -2.09
PTPN4-210ENST00000485247 KRTDAPP60985 99 aa2□□□□□ -2.09
PTPN4-210ENST00000485247 Q6ZQT0 140 aa2□□□□□ -2.09
PTPN4-210ENST00000485247 SVBPQ8N300 66 aa2□□□□□ -2.09
PTPN4-210ENST00000485247 ORMDL1Q9P0S3 153 aa2□□□□□ -2.09
PTPN4-210ENST00000485247 hDV103S1A0JD37 113 aa1.99□□□□□ -2.09
PTPN4-210ENST00000485247 H0YAA0 97 aa1.99□□□□□ -2.09
PTPN4-210ENST00000485247 TMEM256-PLSCR3K7ERE1 68 aa1.98□□□□□ -2.09
PTPN4-210ENST00000485247 DNAL4O96015 105 aa1.98□□□□□ -2.09
PTPN4-210ENST00000485247 A0A087WVE0 104 aa1.97□□□□□ -2.09
PTPN4-210ENST00000485247 NDUFA5Q16718 116 aa1.97□□□□□ -2.09
PTPN4-210ENST00000485247 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
PTPN4-210ENST00000485247 ADM2Q7Z4H4 148 aa1.97□□□□□ -2.09
PTPN4-210ENST00000485247 SMIM26A0A096LP01 95 aa1.96□□□□□ -2.1
PTPN4-210ENST00000485247 H3BQ85 93 aa1.96□□□□□ -2.1
PTPN4-210ENST00000485247 MT1EP04732 61 aa1.96□□□□□ -2.1
PTPN4-210ENST00000485247 C9JAW5 83 aa1.95□□□□□ -2.1
PTPN4-210ENST00000485247 A0A0B4J2C4 111 aa1.94□□□□□ -2.1
PTPN4-210ENST00000485247 HCG22E2RYF7 251 aa1.94□□□□□ -2.1
PTPN4-210ENST00000485247 R4GN34 69 aa1.94□□□□□ -2.1
PTPN4-210ENST00000485247 HIST1H2BKO60814 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST1H2BJP06899 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 MT1GP13640 62 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST1H2BOP23527 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST1H2BBP33778 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST1H2BDP58876 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST1H2BCP62807 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST2H2BEQ16778 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 LINC01554Q52M75 96 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST1H2BHQ93079 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST1H2BNQ99877 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 HIST1H2BMQ99879 126 aa1.93□□□□□ -2.1
PTPN4-210ENST00000485247 M0QZ58 72 aa1.91□□□□□ -2.1
PTPN4-210ENST00000485247 NREPQ16612 68 aa1.91□□□□□ -2.1
PTPN4-210ENST00000485247 PRO1854Q9UHT4 67 aa1.91□□□□□ -2.1
PTPN4-210ENST00000485247 HSBP1L1C9JCN9 74 aa1.9□□□□□ -2.11
PTPN4-210ENST00000485247 NDUFC1O43677 76 aa1.9□□□□□ -2.11
PTPN4-210ENST00000485247 MT1MQ8N339 61 aa1.9□□□□□ -2.11
PTPN4-210ENST00000485247 BPY2O14599 106 aa1.89□□□□□ -2.11
PTPN4-210ENST00000485247 PSMB2P49721 201 aa1.89□□□□□ -2.11
PTPN4-210ENST00000485247 CASC2Q6XLA1 102 aa1.89□□□□□ -2.11
PTPN4-210ENST00000485247 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
PTPN4-210ENST00000485247 A0A1B0GW54 56 aa1.88□□□□□ -2.11
PTPN4-210ENST00000485247 P0C880 135 aa1.87□□□□□ -2.11
PTPN4-210ENST00000485247 V9GYY9 64 aa1.87□□□□□ -2.11
PTPN4-210ENST00000485247 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
PTPN4-210ENST00000485247 COX6CP09669 75 aa1.86□□□□□ -2.11
PTPN4-210ENST00000485247 BAALC-AS2P0C853 105 aa1.86□□□□□ -2.11
PTPN4-210ENST00000485247 HIST3H2BBQ8N257 126 aa1.86□□□□□ -2.11
PTPN4-210ENST00000485247 LOC110117498A0A087WWA1 95 aa1.85□□□□□ -2.11
PTPN4-210ENST00000485247 COX8AP10176 69 aa1.85□□□□□ -2.11
PTPN4-210ENST00000485247 FAM240AA0A1B0GVK7 77 aa1.84□□□□□ -2.11
PTPN4-210ENST00000485247 K7EP34 96 aa1.84□□□□□ -2.11
PTPN4-210ENST00000485247 PSPHP1O15172 72 aa1.84□□□□□ -2.11
PTPN4-210ENST00000485247 FXYD2P54710 66 aa1.84□□□□□ -2.11
PTPN4-210ENST00000485247 K7ERJ3 54 aa1.83□□□□□ -2.12
PTPN4-210ENST00000485247 DLEU1O43261 78 aa1.83□□□□□ -2.12
PTPN4-210ENST00000485247 BATFQ16520 125 aa1.83□□□□□ -2.12
PTPN4-210ENST00000485247 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
PTPN4-210ENST00000485247 C14orf132Q9NPU4 83 aa1.83□□□□□ -2.12
PTPN4-210ENST00000485247 JMJD7-PLA2G4BH0Y9G9 81 aa1.82□□□□□ -2.12
PTPN4-210ENST00000485247 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
PTPN4-210ENST00000485247 C20orf197Q8N268 126 aa1.82□□□□□ -2.12
PTPN4-210ENST00000485247 MT1LQ93083 61 aa1.82□□□□□ -2.12
PTPN4-210ENST00000485247 C14orf144Q96I85 54 aa1.82□□□□□ -2.12
PTPN4-210ENST00000485247 HIST1H2BLQ99880 126 aa1.82□□□□□ -2.12
PTPN4-210ENST00000485247 HIGD1BQ9P298 99 aa1.82□□□□□ -2.12
PTPN4-210ENST00000485247 SCGB1C2P0DMR2 95 aa1.81□□□□□ -2.12
PTPN4-210ENST00000485247 CYP4F30PQ9H0H9 118 aa1.81□□□□□ -2.12
PTPN4-210ENST00000485247 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
PTPN4-210ENST00000485247 LUZP6Q538Z0 58 aa1.8□□□□□ -2.12
PTPN4-210ENST00000485247 A0A1W2PPM0 123 aa1.79□□□□□ -2.12
PTPN4-210ENST00000485247 MT-ATP8P03928 68 aa1.79□□□□□ -2.12
PTPN4-210ENST00000485247 SPANXA2-OT1Q8N9U9 137 aa1.79□□□□□ -2.12
PTPN4-210ENST00000485247 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
PTPN4-210ENST00000485247 NAA38Q9BRA0 125 aaKnown RBP1.78□□□□□ -2.12
PTPN4-210ENST00000485247 PRO0628Q9UI54 55 aa1.77□□□□□ -2.13
PTPN4-210ENST00000485247 A0A0D9SG42 100 aa1.76□□□□□ -2.13
PTPN4-210ENST00000485247 ACYP1P07311 99 aa1.76□□□□□ -2.13
PTPN4-210ENST00000485247 S100A2P29034 98 aa1.76□□□□□ -2.13
PTPN4-210ENST00000485247 TP53AIP1Q9HCN2 124 aa1.76□□□□□ -2.13
PTPN4-210ENST00000485247 ATXN8Q156A1 80 aa1.75□□□□□ -2.13
PTPN4-210ENST00000485247 SPATA45Q537H7 98 aa1.74□□□□□ -2.13
PTPN4-210ENST00000485247 VAMP8Q9BV40 100 aa1.74□□□□□ -2.13
PTPN4-210ENST00000485247 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
PTPN4-210ENST00000485247 TRAV22A0A0B4J277 110 aa1.73□□□□□ -2.13
PTPN4-210ENST00000485247 LOC101927531A0A1B0GV80 90 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms