RNA–Protein interactions for RNA: ENST00000484821.1

POLR2B-209, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-209ENST00000484821 DEFB114Q30KQ6 69 aa0□□□□□ -2.41
POLR2B-209ENST00000484821 KRTAP19-7Q3SYF9 63 aa0□□□□□ -2.41
POLR2B-209ENST00000484821 CLPSL2Q6UWE3 100 aa0□□□□□ -2.41
POLR2B-209ENST00000484821 TMEM167BQ9NRX6 74 aa0□□□□□ -2.41
POLR2B-209ENST00000484821 LINC01549A6NIU2 74 aa-0.01□□□□□ -2.41
POLR2B-209ENST00000484821 H0YGX0 51 aa-0.01□□□□□ -2.41
POLR2B-209ENST00000484821 M0QY20 66 aa-0.01□□□□□ -2.41
POLR2B-209ENST00000484821 SFTA3P0C7M3 94 aa-0.01□□□□□ -2.41
POLR2B-209ENST00000484821 SPART-AS1P0CW21 52 aa-0.01□□□□□ -2.41
POLR2B-209ENST00000484821 KRTAP19-8Q3LI54 63 aa-0.01□□□□□ -2.41
POLR2B-209ENST00000484821 IGLV5-48A0A075B6I7 105 aa-0.02□□□□□ -2.41
POLR2B-209ENST00000484821 DEFB1P60022 68 aa-0.02□□□□□ -2.41
POLR2B-209ENST00000484821 LYSTQ99698 3801 aa-0.02□□□□□ -2.41
POLR2B-209ENST00000484821 ZZEF1O43149 2961 aa-0.02□□□□□ -2.41
POLR2B-209ENST00000484821 VPS13CQ709C8 3753 aa-0.02□□□□□ -2.41
POLR2B-209ENST00000484821 THOC2Q8NI27 1593 aaKnown RBP-0.02□□□□□ -2.41
POLR2B-209ENST00000484821 VPS13AQ96RL7 3174 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 A0A087WWC5 75 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 A8MTW9 85 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 M0QZ58 72 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 M0R1W7 72 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 MT1AP04731 61 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 PLNP26678 52 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 RPS27P42677 84 aaKnown RBP-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 KRTAP6-2Q3LI66 62 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 RPS27LQ71UM5 84 aaKnown RBP-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 WFDC10BQ8IUB3 73 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 LINC00308Q8TCZ7 52 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 KAAG1Q9UBP8 84 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 PKD1P98161 4303 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 ABCC6O95255 1503 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 KIAA0586Q9BVV6 1533 aa-0.03□□□□□ -2.41
POLR2B-209ENST00000484821 SMIM31A0A1B0GVY4 71 aa-0.04□□□□□ -2.42
POLR2B-209ENST00000484821 LINC01546A6NGU7 62 aa-0.04□□□□□ -2.42
POLR2B-209ENST00000484821 SPRR2FQ96RM1 72 aa-0.04□□□□□ -2.42
POLR2B-209ENST00000484821 EFCAB5A4FU69 1503 aa-0.04□□□□□ -2.42
POLR2B-209ENST00000484821 DEFB131AP59861 70 aa-0.05□□□□□ -2.42
POLR2B-209ENST00000484821 KRTAP20-2Q3LI61 65 aa-0.05□□□□□ -2.42
POLR2B-209ENST00000484821 FRYQ5TBA9 3013 aa-0.05□□□□□ -2.42
POLR2B-209ENST00000484821 C3P01024 1663 aa-0.05□□□□□ -2.42
POLR2B-209ENST00000484821 EEA1Q15075 1411 aa-0.05□□□□□ -2.42
POLR2B-209ENST00000484821 ATMQ13315 3056 aa-0.05□□□□□ -2.42
POLR2B-209ENST00000484821 GLI2P10070 1586 aa-0.06□□□□□ -2.42
POLR2B-209ENST00000484821 TRIOO75962 3097 aa-0.06□□□□□ -2.42
POLR2B-209ENST00000484821 ABCA6Q8N139 1617 aa-0.06□□□□□ -2.42
POLR2B-209ENST00000484821 DYNC1H1Q14204 4646 aaKnown RBP-0.06□□□□□ -2.42
POLR2B-209ENST00000484821 INO80Q9ULG1 1556 aaPredicted RBP-0.06□□□□□ -2.42
POLR2B-209ENST00000484821 CPS1P31327 1500 aa-0.07□□□□□ -2.42
POLR2B-209ENST00000484821 IGIPA6NJ69 53 aa-0.07□□□□□ -2.42
POLR2B-209ENST00000484821 MT1HP80294 61 aa-0.07□□□□□ -2.42
POLR2B-209ENST00000484821 SMIM2Q9BVW6 85 aa-0.07□□□□□ -2.42
POLR2B-209ENST00000484821 CMC2Q9NRP2 79 aa-0.07□□□□□ -2.42
POLR2B-209ENST00000484821 CCDC180Q9P1Z9 1646 aa-0.08□□□□□ -2.42
POLR2B-209ENST00000484821 POLR2KP53803 58 aaKnown RBP-0.08□□□□□ -2.42
POLR2B-209ENST00000484821 TOGARAM1Q9Y4F4 1720 aa-0.08□□□□□ -2.42
POLR2B-209ENST00000484821 XIRP2A4UGR9 3374 aa-0.08□□□□□ -2.42
POLR2B-209ENST00000484821 FAT1Q14517 4588 aa-0.08□□□□□ -2.42
POLR2B-209ENST00000484821 ITSN2Q9NZM3 1697 aa-0.08□□□□□ -2.42
POLR2B-209ENST00000484821 UGGT1Q9NYU2 1555 aa-0.09□□□□□ -2.42
POLR2B-209ENST00000484821 CDH23Q9H251 3354 aa-0.09□□□□□ -2.42
POLR2B-209ENST00000484821 KIF1AQ12756 1690 aa-0.09□□□□□ -2.42
POLR2B-209ENST00000484821 CLASP1Q7Z460 1538 aa-0.09□□□□□ -2.42
POLR2B-209ENST00000484821 ANKRD36CQ5JPF3 1778 aa-0.09□□□□□ -2.42
POLR2B-209ENST00000484821 CHD7Q9P2D1 2997 aa-0.09□□□□□ -2.42
POLR2B-209ENST00000484821 VPS13DQ5THJ4 4388 aa-0.1□□□□□ -2.42
POLR2B-209ENST00000484821 DNAH9Q9NYC9 4486 aa-0.1□□□□□ -2.42
POLR2B-209ENST00000484821 TIAM1Q13009 1591 aa-0.1□□□□□ -2.42
POLR2B-209ENST00000484821 DNAH7Q8WXX0 4024 aa-0.1□□□□□ -2.43
POLR2B-209ENST00000484821 MT1HL1P0DM35 61 aa-0.1□□□□□ -2.43
POLR2B-209ENST00000484821 TFF3Q07654 80 aa-0.1□□□□□ -2.43
POLR2B-209ENST00000484821 KRTAP8-1Q8IUC2 63 aa-0.1□□□□□ -2.43
POLR2B-209ENST00000484821 LEAP2Q969E1 77 aa-0.1□□□□□ -2.43
POLR2B-209ENST00000484821 EFCAB6Q5THR3 1501 aa-0.1□□□□□ -2.43
POLR2B-209ENST00000484821 PKHD1P08F94 4074 aa-0.1□□□□□ -2.43
POLR2B-209ENST00000484821 MAST1Q9Y2H9 1570 aa-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 FLGP20930 4061 aaPredicted RBP-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 PREX2Q70Z35 1606 aa-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 SNRPGP15A8MWD9 76 aa-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 NDUFA1O15239 70 aa-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 SMR3BP02814 79 aaPredicted RBP-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 MT1XP80297 61 aa-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 DEFB136Q30KP8 78 aa-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 TOMM7Q9P0U1 55 aa-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 DNAH1Q9P2D7 4330 aa-0.11□□□□□ -2.43
POLR2B-209ENST00000484821 DNAH11Q96DT5 4516 aa-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 ABCA10Q8WWZ4 1543 aa-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 SMG1Q96Q15 3661 aaKnown RBP-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 LY75O60449 1722 aa-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 DEFB4AO15263 64 aa-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 MT1EP04732 61 aa-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 KRTAP19-5Q3LI72 72 aa-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 MT1LQ93083 61 aa-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 PRXQ9BXM0 1461 aa-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 AKAP9Q99996 3911 aa-0.12□□□□□ -2.43
POLR2B-209ENST00000484821 SYCP2Q9BX26 1530 aa-0.13□□□□□ -2.43
POLR2B-209ENST00000484821 CDC42BPAQ5VT25 1732 aa-0.13□□□□□ -2.43
POLR2B-209ENST00000484821 MUC17Q685J3 4493 aa-0.13□□□□□ -2.43
POLR2B-209ENST00000484821 DNAH6Q9C0G6 4158 aa-0.13□□□□□ -2.43
POLR2B-209ENST00000484821 CD52P31358 61 aa-0.13□□□□□ -2.43
POLR2B-209ENST00000484821 RPS29P62273 56 aaKnown RBP-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms