RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
CDK5RAP2-216ENST00000483412 DNAH1Q9P2D7 4330 aa4.24□□□□□ -1.73
CDK5RAP2-216ENST00000483412 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
CDK5RAP2-216ENST00000483412 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
CDK5RAP2-216ENST00000483412 DNAH5Q8TE73 4624 aa4.22□□□□□ -1.73
CDK5RAP2-216ENST00000483412 DNHD1Q96M86 4753 aa4.21□□□□□ -1.74
CDK5RAP2-216ENST00000483412 CSMD3Q7Z407 3707 aa4.2□□□□□ -1.74
CDK5RAP2-216ENST00000483412 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
CDK5RAP2-216ENST00000483412 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
CDK5RAP2-216ENST00000483412 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
CDK5RAP2-216ENST00000483412 DNAH17Q9UFH2 4485 aa4.13□□□□□ -1.75
CDK5RAP2-216ENST00000483412 ANK2Q01484 3957 aa4.13□□□□□ -1.75
CDK5RAP2-216ENST00000483412 DNAH11Q96DT5 4516 aa4.13□□□□□ -1.75
CDK5RAP2-216ENST00000483412 STARD9Q9P2P6 4700 aa4.13□□□□□ -1.75
CDK5RAP2-216ENST00000483412 DNAH10Q8IVF4 4471 aa4.11□□□□□ -1.75
CDK5RAP2-216ENST00000483412 DNAH3Q8TD57 4116 aa4.08□□□□□ -1.76
CDK5RAP2-216ENST00000483412 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
CDK5RAP2-216ENST00000483412 PRKDCP78527 4128 aaKnown RBP4.07□□□□□ -1.76
CDK5RAP2-216ENST00000483412 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
CDK5RAP2-216ENST00000483412 LRP1BQ9NZR2 4599 aa4.05□□□□□ -1.76
CDK5RAP2-216ENST00000483412 DNAH2Q9P225 4427 aa4.04□□□□□ -1.76
CDK5RAP2-216ENST00000483412 DYNC2H1Q8NCM8 4307 aaKnown RBP4.01□□□□□ -1.77
CDK5RAP2-216ENST00000483412 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
CDK5RAP2-216ENST00000483412 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
CDK5RAP2-216ENST00000483412 FAT1Q14517 4588 aa3.97□□□□□ -1.77
CDK5RAP2-216ENST00000483412 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.77
CDK5RAP2-216ENST00000483412 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
CDK5RAP2-216ENST00000483412 KMT2AQ03164 3969 aa3.96□□□□□ -1.78
CDK5RAP2-216ENST00000483412 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
CDK5RAP2-216ENST00000483412 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
CDK5RAP2-216ENST00000483412 RYR1P21817 5038 aa3.91□□□□□ -1.78
CDK5RAP2-216ENST00000483412 DNAH8Q96JB1 4490 aa3.9□□□□□ -1.79
CDK5RAP2-216ENST00000483412 MT1HP80294 61 aa3.87□□□□□ -1.79
CDK5RAP2-216ENST00000483412 VPS13BQ7Z7G8 4022 aa3.84□□□□□ -1.79
CDK5RAP2-216ENST00000483412 KRTAP17-1Q9BYP8 105 aa3.84□□□□□ -1.79
CDK5RAP2-216ENST00000483412 DNAH7Q8WXX0 4024 aa3.82□□□□□ -1.8
CDK5RAP2-216ENST00000483412 RYR3Q15413 4870 aa3.81□□□□□ -1.8
CDK5RAP2-216ENST00000483412 LYSTQ99698 3801 aa3.8□□□□□ -1.8
CDK5RAP2-216ENST00000483412 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
CDK5RAP2-216ENST00000483412 APOBP04114 4563 aaKnown RBP3.79□□□□□ -1.8
CDK5RAP2-216ENST00000483412 MT2AP02795 61 aa3.78□□□□□ -1.8
CDK5RAP2-216ENST00000483412 RYR2Q92736 4967 aa3.78□□□□□ -1.81
CDK5RAP2-216ENST00000483412 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
CDK5RAP2-216ENST00000483412 HECTD4Q9Y4D8 3996 aa3.76□□□□□ -1.81
CDK5RAP2-216ENST00000483412 KIAA1109Q2LD37 5005 aa3.76□□□□□ -1.81
CDK5RAP2-216ENST00000483412 FRAS1Q86XX4 4008 aa3.74□□□□□ -1.81
CDK5RAP2-216ENST00000483412 BIRC6Q9NR09 4857 aa3.73□□□□□ -1.81
CDK5RAP2-216ENST00000483412 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
CDK5RAP2-216ENST00000483412 MT1FP04733 61 aa3.71□□□□□ -1.81
CDK5RAP2-216ENST00000483412 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.82
CDK5RAP2-216ENST00000483412 SPRR2GQ9BYE4 73 aa3.7□□□□□ -1.82
CDK5RAP2-216ENST00000483412 MT3P25713 68 aa3.67□□□□□ -1.82
CDK5RAP2-216ENST00000483412 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
CDK5RAP2-216ENST00000483412 FAT3Q8TDW7 4589 aa3.67□□□□□ -1.82
CDK5RAP2-216ENST00000483412 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
CDK5RAP2-216ENST00000483412 HSPG2P98160 4391 aa3.65□□□□□ -1.82
CDK5RAP2-216ENST00000483412 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
CDK5RAP2-216ENST00000483412 MYCBP2O75592 4640 aa3.63□□□□□ -1.83
CDK5RAP2-216ENST00000483412 HERC2O95714 4834 aa3.59□□□□□ -1.83
CDK5RAP2-216ENST00000483412 PKHD1P08F94 4074 aa3.58□□□□□ -1.84
CDK5RAP2-216ENST00000483412 PKD1P98161 4303 aa3.57□□□□□ -1.84
CDK5RAP2-216ENST00000483412 HERC1Q15751 4861 aa3.53□□□□□ -1.84
CDK5RAP2-216ENST00000483412 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
CDK5RAP2-216ENST00000483412 KRTAP19-1Q8IUB9 90 aa3.49□□□□□ -1.85
CDK5RAP2-216ENST00000483412 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
CDK5RAP2-216ENST00000483412 PKHD1L1Q86WI1 4243 aa3.48□□□□□ -1.85
CDK5RAP2-216ENST00000483412 PCLOQ9Y6V0 5065 aa3.48□□□□□ -1.85
CDK5RAP2-216ENST00000483412 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
CDK5RAP2-216ENST00000483412 KMT2CQ8NEZ4 4911 aaKnown RBP3.47□□□□□ -1.85
CDK5RAP2-216ENST00000483412 LCE2CQ5TA81 110 aa3.46□□□□□ -1.86
CDK5RAP2-216ENST00000483412 LRP2P98164 4655 aa3.45□□□□□ -1.86
CDK5RAP2-216ENST00000483412 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
CDK5RAP2-216ENST00000483412 LPAP08519 4548 aa3.44□□□□□ -1.86
CDK5RAP2-216ENST00000483412 TNXBP22105 4242 aa3.43□□□□□ -1.86
CDK5RAP2-216ENST00000483412 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
CDK5RAP2-216ENST00000483412 MT1BP07438 61 aa3.39□□□□□ -1.87
CDK5RAP2-216ENST00000483412 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
CDK5RAP2-216ENST00000483412 EPPK1P58107 5090 aaKnown RBP3.38□□□□□ -1.87
CDK5RAP2-216ENST00000483412 MT1XP80297 61 aa3.38□□□□□ -1.87
CDK5RAP2-216ENST00000483412 KRTAP9-3Q9BYQ3 159 aa3.37□□□□□ -1.87
CDK5RAP2-216ENST00000483412 MT1GP13640 62 aa3.33□□□□□ -1.88
CDK5RAP2-216ENST00000483412 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
CDK5RAP2-216ENST00000483412 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
CDK5RAP2-216ENST00000483412 SPRR2EP22531 72 aa3.29□□□□□ -1.88
CDK5RAP2-216ENST00000483412 SPRR2BP35325 72 aa3.29□□□□□ -1.88
CDK5RAP2-216ENST00000483412 SPRR2AP35326 72 aa3.29□□□□□ -1.88
CDK5RAP2-216ENST00000483412 LCE2DQ5TA82 110 aaPredicted RBP3.27□□□□□ -1.89
CDK5RAP2-216ENST00000483412 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
CDK5RAP2-216ENST00000483412 KRTAP4-8A0A0G2JLE6 195 aa3.24□□□□□ -1.89
CDK5RAP2-216ENST00000483412 KRTAP4-8Q9BYQ9 185 aa3.24□□□□□ -1.89
CDK5RAP2-216ENST00000483412 LCE2BO14633 110 aa3.23□□□□□ -1.89
CDK5RAP2-216ENST00000483412 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.89
CDK5RAP2-216ENST00000483412 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
CDK5RAP2-216ENST00000483412 SPRR2DP22532 72 aa3.18□□□□□ -1.9
CDK5RAP2-216ENST00000483412 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
CDK5RAP2-216ENST00000483412 LCE2AQ5TA79 106 aaPredicted RBP3.13□□□□□ -1.91
CDK5RAP2-216ENST00000483412 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
CDK5RAP2-216ENST00000483412 FAT4Q6V0I7 4981 aa3.11□□□□□ -1.91
CDK5RAP2-216ENST00000483412 RNF213Q63HN8 5207 aa3.11□□□□□ -1.91
CDK5RAP2-216ENST00000483412 KRTAP9-2Q9BYQ4 174 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms