RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 FLNAP21333 2647 aaKnown RBP2.84□□□□□ -1.95
SGIP1-210ENST00000483060 IGSF10Q6WRI0 2623 aa2.84□□□□□ -1.95
SGIP1-210ENST00000483060 A0A0D9SG42 100 aa2.84□□□□□ -1.95
SGIP1-210ENST00000483060 POLQO75417 2590 aa2.84□□□□□ -1.96
SGIP1-210ENST00000483060 CCDC168Q8NDH2 2452 aa2.83□□□□□ -1.96
SGIP1-210ENST00000483060 DNAH1Q9P2D7 4330 aa2.83□□□□□ -1.96
SGIP1-210ENST00000483060 UBR5O95071 2799 aaPredicted RBP2.83□□□□□ -1.96
SGIP1-210ENST00000483060 TENM4Q6N022 2769 aa2.83□□□□□ -1.96
SGIP1-210ENST00000483060 C10orf95Q9H7T3 257 aa2.83□□□□□ -1.96
SGIP1-210ENST00000483060 SETD2Q9BYW2 2564 aaPredicted RBP2.82□□□□□ -1.96
SGIP1-210ENST00000483060 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
SGIP1-210ENST00000483060 HECTD1Q9ULT8 2610 aa2.82□□□□□ -1.96
SGIP1-210ENST00000483060 ZNF462Q96JM2 2506 aa2.81□□□□□ -1.96
SGIP1-210ENST00000483060 KRTAP13-4Q3LI77 160 aa2.8□□□□□ -1.96
SGIP1-210ENST00000483060 FLG2Q5D862 2391 aaPredicted RBP2.79□□□□□ -1.96
SGIP1-210ENST00000483060 NIPBLQ6KC79 2804 aaeCLIP2.78□□□□□ -1.96
SGIP1-210ENST00000483060 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
SGIP1-210ENST00000483060 TEP1Q99973 2627 aaKnown RBP2.77□□□□□ -1.97
SGIP1-210ENST00000483060 ACANP16112 2415 aa2.77□□□□□ -1.97
SGIP1-210ENST00000483060 FLNCQ14315 2725 aa2.77□□□□□ -1.97
SGIP1-210ENST00000483060 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
SGIP1-210ENST00000483060 SRRM2Q9UQ35 2752 aaKnown RBP2.76□□□□□ -1.97
SGIP1-210ENST00000483060 VWFP04275 2813 aa2.75□□□□□ -1.97
SGIP1-210ENST00000483060 C9orf92A6NGG3 77 aa2.75□□□□□ -1.97
SGIP1-210ENST00000483060 PRO2289Q9P1D8 64 aa2.75□□□□□ -1.97
SGIP1-210ENST00000483060 PDZD2O15018 2839 aa2.75□□□□□ -1.97
SGIP1-210ENST00000483060 INE1O15225 51 aa2.72□□□□□ -1.97
SGIP1-210ENST00000483060 TENM3Q9P273 2699 aa2.71□□□□□ -1.98
SGIP1-210ENST00000483060 ZNF469Q96JG9 3925 aaPredicted RBP2.7□□□□□ -1.98
SGIP1-210ENST00000483060 ITPR2Q14571 2701 aa2.69□□□□□ -1.98
SGIP1-210ENST00000483060 PKD1L1Q8TDX9 2849 aa2.69□□□□□ -1.98
SGIP1-210ENST00000483060 DNAH3Q8TD57 4116 aa2.69□□□□□ -1.98
SGIP1-210ENST00000483060 TGP01266 2768 aa2.69□□□□□ -1.98
SGIP1-210ENST00000483060 ATRQ13535 2644 aa2.69□□□□□ -1.98
SGIP1-210ENST00000483060 VPS13DQ5THJ4 4388 aa2.68□□□□□ -1.98
SGIP1-210ENST00000483060 R4GN34 69 aa2.68□□□□□ -1.98
SGIP1-210ENST00000483060 CUBNO60494 3623 aa2.67□□□□□ -1.98
SGIP1-210ENST00000483060 DNHD1Q96M86 4753 aa2.67□□□□□ -1.98
SGIP1-210ENST00000483060 ANK2Q01484 3957 aa2.67□□□□□ -1.98
SGIP1-210ENST00000483060 MEGF8Q7Z7M0 2845 aa2.67□□□□□ -1.98
SGIP1-210ENST00000483060 TRRAPQ9Y4A5 3859 aa2.66□□□□□ -1.98
SGIP1-210ENST00000483060 NSD1Q96L73 2696 aaPredicted RBP2.65□□□□□ -1.98
SGIP1-210ENST00000483060 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.99
SGIP1-210ENST00000483060 FBN1P35555 2871 aaKnown RBP2.65□□□□□ -1.99
SGIP1-210ENST00000483060 FBN3Q75N90 2809 aa2.64□□□□□ -1.99
SGIP1-210ENST00000483060 COL6A5A8TX70 2615 aa2.63□□□□□ -1.99
SGIP1-210ENST00000483060 STAB2Q8WWQ8 2551 aa2.62□□□□□ -1.99
SGIP1-210ENST00000483060 TENM1Q9UKZ4 2725 aa2.62□□□□□ -1.99
SGIP1-210ENST00000483060 DNAH8Q96JB1 4490 aa2.61□□□□□ -1.99
SGIP1-210ENST00000483060 LYSTQ99698 3801 aa2.61□□□□□ -1.99
SGIP1-210ENST00000483060 NBEAL1Q6ZS30 2694 aa2.61□□□□□ -1.99
SGIP1-210ENST00000483060 FRAS1Q86XX4 4008 aa2.6□□□□□ -1.99
SGIP1-210ENST00000483060 DYNC2H1Q8NCM8 4307 aaKnown RBP2.6□□□□□ -1.99
SGIP1-210ENST00000483060 HUWE1Q7Z6Z7 4374 aaKnown RBP2.6□□□□□ -1.99
SGIP1-210ENST00000483060 DNAH10Q8IVF4 4471 aa2.59□□□□□ -1.99
SGIP1-210ENST00000483060 TNP1P09430 55 aa2.59□□□□□ -1.99
SGIP1-210ENST00000483060 Q5VSD8 79 aa2.59□□□□□ -1.99
SGIP1-210ENST00000483060 CSMD3Q7Z407 3707 aa2.57□□□□□ -2
SGIP1-210ENST00000483060 DNAH9Q9NYC9 4486 aa2.57□□□□□ -2
SGIP1-210ENST00000483060 NOTCH1P46531 2555 aa2.55□□□□□ -2
SGIP1-210ENST00000483060 PRKDCP78527 4128 aaKnown RBP2.55□□□□□ -2
SGIP1-210ENST00000483060 COL7A1Q02388 2944 aa2.55□□□□□ -2
SGIP1-210ENST00000483060 DMBT1Q9UGM3 2413 aaPredicted RBP2.53□□□□□ -2
SGIP1-210ENST00000483060 DNAH7Q8WXX0 4024 aa2.53□□□□□ -2
SGIP1-210ENST00000483060 STAB1Q9NY15 2570 aa2.53□□□□□ -2
SGIP1-210ENST00000483060 KRTAP10-4P60372 401 aaPredicted RBP2.53□□□□□ -2
SGIP1-210ENST00000483060 MGAM2Q2M2H8 2515 aa2.52□□□□□ -2.01
SGIP1-210ENST00000483060 DNAH17Q9UFH2 4485 aa2.52□□□□□ -2.01
SGIP1-210ENST00000483060 HECTD4Q9Y4D8 3996 aa2.52□□□□□ -2.01
SGIP1-210ENST00000483060 KRTAP21-3Q3LHN1 58 aa2.52□□□□□ -2.01
SGIP1-210ENST00000483060 DNAH6Q9C0G6 4158 aa2.5□□□□□ -2.01
SGIP1-210ENST00000483060 CMYA5Q8N3K9 4069 aa2.5□□□□□ -2.01
SGIP1-210ENST00000483060 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
SGIP1-210ENST00000483060 SMR3BP02814 79 aaPredicted RBP2.46□□□□□ -2.02
SGIP1-210ENST00000483060 DNAH2Q9P225 4427 aa2.45□□□□□ -2.02
SGIP1-210ENST00000483060 DNAH11Q96DT5 4516 aa2.45□□□□□ -2.02
SGIP1-210ENST00000483060 SACSQ9NZJ4 4579 aa2.43□□□□□ -2.02
SGIP1-210ENST00000483060 KMT2AQ03164 3969 aa2.42□□□□□ -2.02
SGIP1-210ENST00000483060 PLECQ15149 4684 aaKnown RBP2.41□□□□□ -2.02
SGIP1-210ENST00000483060 KRTAP10-10P60014 251 aa2.39□□□□□ -2.03
SGIP1-210ENST00000483060 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
SGIP1-210ENST00000483060 VPS13BQ7Z7G8 4022 aa2.39□□□□□ -2.03
SGIP1-210ENST00000483060 LRP1BQ9NZR2 4599 aa2.36□□□□□ -2.03
SGIP1-210ENST00000483060 PKHD1P08F94 4074 aa2.36□□□□□ -2.03
SGIP1-210ENST00000483060 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.03
SGIP1-210ENST00000483060 STARD9Q9P2P6 4700 aa2.33□□□□□ -2.04
SGIP1-210ENST00000483060 KMT2CQ8NEZ4 4911 aaKnown RBP2.32□□□□□ -2.04
SGIP1-210ENST00000483060 KRTAP8-1Q8IUC2 63 aa2.31□□□□□ -2.04
SGIP1-210ENST00000483060 RYR3Q15413 4870 aa2.31□□□□□ -2.04
SGIP1-210ENST00000483060 LRP1Q07954 4544 aaKnown RBP2.3□□□□□ -2.04
SGIP1-210ENST00000483060 MT1HL1P0DM35 61 aa2.29□□□□□ -2.04
SGIP1-210ENST00000483060 PKD1P98161 4303 aa2.29□□□□□ -2.04
SGIP1-210ENST00000483060 TNXBP22105 4242 aa2.26□□□□□ -2.05
SGIP1-210ENST00000483060 FAT2Q9NYQ8 4349 aa2.26□□□□□ -2.05
SGIP1-210ENST00000483060 BIRC6Q9NR09 4857 aa2.25□□□□□ -2.05
SGIP1-210ENST00000483060 APOBP04114 4563 aaKnown RBP2.25□□□□□ -2.05
SGIP1-210ENST00000483060 SPRR2GQ9BYE4 73 aa2.25□□□□□ -2.05
SGIP1-210ENST00000483060 MYCBP2O75592 4640 aa2.24□□□□□ -2.05
SGIP1-210ENST00000483060 EPPK1P58107 5090 aaKnown RBP2.23□□□□□ -2.05
SGIP1-210ENST00000483060 RYR1P21817 5038 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms