RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 MYMXA0A1B0GTQ4 84 aa1.58□□□□□ -2.16
SHQ1-208ENST00000482785 MT1BP07438 61 aa1.58□□□□□ -2.16
SHQ1-208ENST00000482785 COX17Q14061 63 aa1.58□□□□□ -2.16
SHQ1-208ENST00000482785 ARL17AQ8IVW1 177 aa1.58□□□□□ -2.16
SHQ1-208ENST00000482785 TOMM7Q9P0U1 55 aa1.58□□□□□ -2.16
SHQ1-208ENST00000482785 C22orf24Q9Y442 160 aa1.58□□□□□ -2.16
SHQ1-208ENST00000482785 BCE1O60756 84 aa1.57□□□□□ -2.16
SHQ1-208ENST00000482785 SMIM6P0DI80 62 aa1.57□□□□□ -2.16
SHQ1-208ENST00000482785 RBM3P98179 157 aaKnown RBP1.57□□□□□ -2.16
SHQ1-208ENST00000482785 ATP11AUNQ6ZP68 121 aa1.57□□□□□ -2.16
SHQ1-208ENST00000482785 ZNF625Q96I27 306 aaPredicted RBP1.57□□□□□ -2.16
SHQ1-208ENST00000482785 PMCHL2Q9BQD1 86 aa1.57□□□□□ -2.16
SHQ1-208ENST00000482785 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
SHQ1-208ENST00000482785 NDUFA12Q9UI09 145 aa1.57□□□□□ -2.16
SHQ1-208ENST00000482785 ZNF815PA8K554 130 aa1.56□□□□□ -2.16
SHQ1-208ENST00000482785 LINC00158P58513 81 aa1.56□□□□□ -2.16
SHQ1-208ENST00000482785 KRTAP13-1Q8IUC0 172 aa1.56□□□□□ -2.16
SHQ1-208ENST00000482785 COPS9Q8WXC6 57 aa1.56□□□□□ -2.16
SHQ1-208ENST00000482785 NAA38Q9BRA0 125 aaKnown RBP1.56□□□□□ -2.16
SHQ1-208ENST00000482785 SMIM13P0DJ93 91 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 COX8AP10176 69 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 IFITM1P13164 125 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 PYY3Q5JQD4 70 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 MEIG1Q5JSS6 88 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 C12orf57Q99622 126 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 VAMP8Q9BV40 100 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 CYSTM1Q9H1C7 97 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 CDC42SE1Q9NRR8 79 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 SNURFQ9Y675 71 aa1.55□□□□□ -2.16
SHQ1-208ENST00000482785 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
SHQ1-208ENST00000482785 INE1O15225 51 aa1.54□□□□□ -2.16
SHQ1-208ENST00000482785 SPATA45Q537H7 98 aa1.54□□□□□ -2.16
SHQ1-208ENST00000482785 SPANXDQ9BXN6 97 aa1.54□□□□□ -2.16
SHQ1-208ENST00000482785 LOC110117498A0A087WWA1 95 aa1.53□□□□□ -2.16
SHQ1-208ENST00000482785 SPRR1AP35321 89 aa1.53□□□□□ -2.16
SHQ1-208ENST00000482785 SPAG11AQ6PDA7 123 aa1.53□□□□□ -2.16
SHQ1-208ENST00000482785 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
SHQ1-208ENST00000482785 LINC00308Q8TCZ7 52 aa1.53□□□□□ -2.16
SHQ1-208ENST00000482785 C14orf144Q96I85 54 aa1.53□□□□□ -2.16
SHQ1-208ENST00000482785 KCNQ1DNQ9H478 68 aa1.53□□□□□ -2.16
SHQ1-208ENST00000482785 HIGD1BQ9P298 99 aa1.53□□□□□ -2.16
SHQ1-208ENST00000482785 UQCR10Q9UDW1 63 aa1.53□□□□□ -2.16
SHQ1-208ENST00000482785 TRAV13-2A0A0B4J235 113 aa1.52□□□□□ -2.17
SHQ1-208ENST00000482785 S100A7L2Q5SY68 101 aa1.52□□□□□ -2.17
SHQ1-208ENST00000482785 MUSTN1Q8IVN3 82 aa1.52□□□□□ -2.17
SHQ1-208ENST00000482785 NCR3O14931 201 aa1.51□□□□□ -2.17
SHQ1-208ENST00000482785 NPC2P61916 151 aa1.51□□□□□ -2.17
SHQ1-208ENST00000482785 PRLHP81277 87 aa1.51□□□□□ -2.17
SHQ1-208ENST00000482785 HSD52Q0P140 79 aa1.51□□□□□ -2.17
SHQ1-208ENST00000482785 PP632Q6XCG6 107 aa1.51□□□□□ -2.17
SHQ1-208ENST00000482785 PPDPFLQ8WWR9 84 aa1.51□□□□□ -2.17
SHQ1-208ENST00000482785 SPRR4Q96PI1 79 aa1.51□□□□□ -2.17
SHQ1-208ENST00000482785 TRAV23DV6A0A075B6W5 121 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 IGKV3D-7A0A0C4DH55 119 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 TRBV10-3A0A0K0K1G6 114 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 ETDCA0A1B0GVM5 59 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 C9orf92A6NGG3 77 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 JMJD7-PLA2G4BH0Y9G9 81 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 M0R143 59 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 SNCGO76070 127 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 SPINK1P00995 79 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 RPS29P62273 56 aaKnown RBP1.5□□□□□ -2.17
SHQ1-208ENST00000482785 OCIAD2Q56VL3 154 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 SSBP3-AS1Q7Z2R9 100 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 PRO1933Q9H354 126 aa1.5□□□□□ -2.17
SHQ1-208ENST00000482785 H0YGX0 51 aa1.49□□□□□ -2.17
SHQ1-208ENST00000482785 DNAL4O96015 105 aa1.49□□□□□ -2.17
SHQ1-208ENST00000482785 COX7BP24311 80 aa1.49□□□□□ -2.17
SHQ1-208ENST00000482785 BVES-AS1Q5T3Y7 98 aa1.49□□□□□ -2.17
SHQ1-208ENST00000482785 Q6ZRX8 168 aa1.49□□□□□ -2.17
SHQ1-208ENST00000482785 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
SHQ1-208ENST00000482785 SMIM11BQ8TCY0 68 aa1.49□□□□□ -2.17
SHQ1-208ENST00000482785 PRO1854Q9UHT4 67 aa1.49□□□□□ -2.17
SHQ1-208ENST00000482785 CCDC179H3BU77 68 aa1.48□□□□□ -2.17
SHQ1-208ENST00000482785 COX6CP09669 75 aa1.48□□□□□ -2.17
SHQ1-208ENST00000482785 SPRR1BP22528 89 aa1.48□□□□□ -2.17
SHQ1-208ENST00000482785 ELOF1P60002 83 aaKnown RBP1.48□□□□□ -2.17
SHQ1-208ENST00000482785 LINC00575Q6W349 94 aa1.48□□□□□ -2.17
SHQ1-208ENST00000482785 hADV29S1A0JD25 119 aa1.47□□□□□ -2.17
SHQ1-208ENST00000482785 PDE6GP18545 87 aa1.47□□□□□ -2.17
SHQ1-208ENST00000482785 CSAG1Q6PB30 78 aa1.47□□□□□ -2.17
SHQ1-208ENST00000482785 LIMD2Q9BT23 127 aa1.47□□□□□ -2.17
SHQ1-208ENST00000482785 TEX49A0A1B0GTD5 131 aa1.46□□□□□ -2.18
SHQ1-208ENST00000482785 COL5A1-AS1Q5SY13 56 aa1.46□□□□□ -2.18
SHQ1-208ENST00000482785 Q5VV11 94 aa1.46□□□□□ -2.18
SHQ1-208ENST00000482785 DMAC1Q96GE9 116 aa1.46□□□□□ -2.18
SHQ1-208ENST00000482785 IGLV5-48A0A075B6I7 105 aa1.45□□□□□ -2.18
SHQ1-208ENST00000482785 ATXN8Q156A1 80 aa1.45□□□□□ -2.18
SHQ1-208ENST00000482785 DEFB105AQ8NG35 78 aa1.45□□□□□ -2.18
SHQ1-208ENST00000482785 SNHG12Q9BXW3 62 aa1.45□□□□□ -2.18
SHQ1-208ENST00000482785 SERP1Q9Y6X1 66 aa1.45□□□□□ -2.18
SHQ1-208ENST00000482785 A0A1W2PPM0 123 aa1.44□□□□□ -2.18
SHQ1-208ENST00000482785 F8WEM9 126 aa1.44□□□□□ -2.18
SHQ1-208ENST00000482785 H3BUT2 72 aa1.44□□□□□ -2.18
SHQ1-208ENST00000482785 RPL37P61927 97 aaKnown RBP1.44□□□□□ -2.18
SHQ1-208ENST00000482785 C9orf153Q5TBE3 101 aa1.44□□□□□ -2.18
SHQ1-208ENST00000482785 Q6ZQY7 126 aa1.44□□□□□ -2.18
SHQ1-208ENST00000482785 OBSCN-AS1Q96MR7 158 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms