RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 MOBPQ13875 183 aa4.24□□□□□ -1.73
TVP23B-203ENST00000482741 Q5VSD8 79 aa4.23□□□□□ -1.73
TVP23B-203ENST00000482741 Q5VV11 94 aa4.22□□□□□ -1.73
TVP23B-203ENST00000482741 STAB2Q8WWQ8 2551 aa4.22□□□□□ -1.73
TVP23B-203ENST00000482741 Q1T7F1 81 aa4.22□□□□□ -1.73
TVP23B-203ENST00000482741 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
TVP23B-203ENST00000482741 Q6ZQY7 126 aa4.2□□□□□ -1.74
TVP23B-203ENST00000482741 WNK1Q9H4A3 2382 aa4.19□□□□□ -1.74
TVP23B-203ENST00000482741 KRTAP19-2Q3LHN2 52 aa4.19□□□□□ -1.74
TVP23B-203ENST00000482741 C1orf137Q5JT78 98 aa4.19□□□□□ -1.74
TVP23B-203ENST00000482741 FLG2Q5D862 2391 aaPredicted RBP4.18□□□□□ -1.74
TVP23B-203ENST00000482741 LOC101927531A0A1B0GV80 90 aa4.17□□□□□ -1.74
TVP23B-203ENST00000482741 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
TVP23B-203ENST00000482741 LRP2P98164 4655 aa4.12□□□□□ -1.75
TVP23B-203ENST00000482741 IGKV4-1P06312 121 aa4.12□□□□□ -1.75
TVP23B-203ENST00000482741 WFDC13Q8IUB5 93 aa4.12□□□□□ -1.75
TVP23B-203ENST00000482741 HMCN2Q8NDA2 5059 aa4.12□□□□□ -1.75
TVP23B-203ENST00000482741 LINC00304Q8N9R0 145 aa4.12□□□□□ -1.75
TVP23B-203ENST00000482741 PRLHP81277 87 aa4.11□□□□□ -1.75
TVP23B-203ENST00000482741 ZCCHC13Q8WW36 166 aaKnown RBP4.11□□□□□ -1.75
TVP23B-203ENST00000482741 MMP24-AS1A0A0U1RRL7 71 aa4.11□□□□□ -1.75
TVP23B-203ENST00000482741 JMJD1CQ15652 2540 aa4.09□□□□□ -1.75
TVP23B-203ENST00000482741 TP53AIP1Q9HCN2 124 aa4.09□□□□□ -1.75
TVP23B-203ENST00000482741 IGKV2-24A0A0C4DH68 120 aa4.08□□□□□ -1.76
TVP23B-203ENST00000482741 SPINK7P58062 85 aa4.08□□□□□ -1.76
TVP23B-203ENST00000482741 RPL37P61927 97 aaKnown RBP4.06□□□□□ -1.76
TVP23B-203ENST00000482741 KRTAP4-5Q9BYR2 181 aa4.06□□□□□ -1.76
TVP23B-203ENST00000482741 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
TVP23B-203ENST00000482741 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
TVP23B-203ENST00000482741 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.77
TVP23B-203ENST00000482741 NOTCH1P46531 2555 aa4.01□□□□□ -1.77
TVP23B-203ENST00000482741 COA5Q86WW8 74 aa3.96□□□□□ -1.77
TVP23B-203ENST00000482741 H0YAA0 97 aa3.96□□□□□ -1.78
TVP23B-203ENST00000482741 PCOTHQ58A44 107 aa3.96□□□□□ -1.78
TVP23B-203ENST00000482741 MRPL34Q9BQ48 92 aaKnown RBP3.95□□□□□ -1.78
TVP23B-203ENST00000482741 A0A087WSZ3 146 aa3.95□□□□□ -1.78
TVP23B-203ENST00000482741 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
TVP23B-203ENST00000482741 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
TVP23B-203ENST00000482741 CRIPTQ9P021 101 aa3.94□□□□□ -1.78
TVP23B-203ENST00000482741 DEFB105AQ8NG35 78 aa3.94□□□□□ -1.78
TVP23B-203ENST00000482741 NDUFB1O75438 58 aa3.93□□□□□ -1.78
TVP23B-203ENST00000482741 DMAC1Q96GE9 116 aa3.92□□□□□ -1.78
TVP23B-203ENST00000482741 K7EQZ3 153 aa3.9□□□□□ -1.79
TVP23B-203ENST00000482741 H0Y9P7 68 aa3.88□□□□□ -1.79
TVP23B-203ENST00000482741 KRTAP9-3Q9BYQ3 159 aa3.88□□□□□ -1.79
TVP23B-203ENST00000482741 DMBT1Q9UGM3 2413 aaPredicted RBP3.86□□□□□ -1.79
TVP23B-203ENST00000482741 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
TVP23B-203ENST00000482741 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
TVP23B-203ENST00000482741 SRRM2Q9UQ35 2752 aaKnown RBP3.85□□□□□ -1.79
TVP23B-203ENST00000482741 SMR3BP02814 79 aaPredicted RBP3.83□□□□□ -1.8
TVP23B-203ENST00000482741 ANAPC11Q9NYG5 84 aa3.81□□□□□ -1.8
TVP23B-203ENST00000482741 A0A1B0GU69 56 aa3.78□□□□□ -1.8
TVP23B-203ENST00000482741 KRTAP4-1Q9BYQ7 146 aa3.78□□□□□ -1.8
TVP23B-203ENST00000482741 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
TVP23B-203ENST00000482741 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
TVP23B-203ENST00000482741 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
TVP23B-203ENST00000482741 UQCR11O14957 56 aa3.73□□□□□ -1.81
TVP23B-203ENST00000482741 ACYP2P14621 99 aa3.71□□□□□ -1.82
TVP23B-203ENST00000482741 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
TVP23B-203ENST00000482741 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
TVP23B-203ENST00000482741 LPAP08519 4548 aa3.69□□□□□ -1.82
TVP23B-203ENST00000482741 SPATA8Q6RVD6 105 aa3.69□□□□□ -1.82
TVP23B-203ENST00000482741 H1FX-AS1Q4G0G2 97 aa3.68□□□□□ -1.82
TVP23B-203ENST00000482741 MT1HP80294 61 aa3.68□□□□□ -1.82
TVP23B-203ENST00000482741 KRTAP19-8Q3LI54 63 aa3.65□□□□□ -1.82
TVP23B-203ENST00000482741 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
TVP23B-203ENST00000482741 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
TVP23B-203ENST00000482741 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
TVP23B-203ENST00000482741 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
TVP23B-203ENST00000482741 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
TVP23B-203ENST00000482741 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
TVP23B-203ENST00000482741 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
TVP23B-203ENST00000482741 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
TVP23B-203ENST00000482741 MT3P25713 68 aa3.53□□□□□ -1.84
TVP23B-203ENST00000482741 UBR4Q5T4S7 5183 aa3.51□□□□□ -1.85
TVP23B-203ENST00000482741 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
TVP23B-203ENST00000482741 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
TVP23B-203ENST00000482741 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
TVP23B-203ENST00000482741 MT2AP02795 61 aa3.48□□□□□ -1.85
TVP23B-203ENST00000482741 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
TVP23B-203ENST00000482741 S4R3F8 94 aa3.47□□□□□ -1.85
TVP23B-203ENST00000482741 C9orf92A6NGG3 77 aa3.46□□□□□ -1.85
TVP23B-203ENST00000482741 INE1O15225 51 aa3.44□□□□□ -1.86
TVP23B-203ENST00000482741 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
TVP23B-203ENST00000482741 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
TVP23B-203ENST00000482741 M0QZ58 72 aa3.43□□□□□ -1.86
TVP23B-203ENST00000482741 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
TVP23B-203ENST00000482741 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
TVP23B-203ENST00000482741 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
TVP23B-203ENST00000482741 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
TVP23B-203ENST00000482741 A0A0D9SG42 100 aa3.41□□□□□ -1.86
TVP23B-203ENST00000482741 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.87
TVP23B-203ENST00000482741 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
TVP23B-203ENST00000482741 MT1FP04733 61 aa3.39□□□□□ -1.87
TVP23B-203ENST00000482741 KRTAP4-8Q9BYQ9 185 aa3.39□□□□□ -1.87
TVP23B-203ENST00000482741 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
TVP23B-203ENST00000482741 PP632Q6XCG6 107 aa3.38□□□□□ -1.87
TVP23B-203ENST00000482741 MT1BP07438 61 aa3.35□□□□□ -1.87
TVP23B-203ENST00000482741 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
TVP23B-203ENST00000482741 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms