RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 K7EQZ3 153 aa4.06□□□□□ -1.76
GPNMB-211ENST00000479625 PCP4P48539 62 aa4.06□□□□□ -1.76
GPNMB-211ENST00000479625 PAM16Q9Y3D7 125 aa4.06□□□□□ -1.76
GPNMB-211ENST00000479625 COX6CP09669 75 aa4.05□□□□□ -1.76
GPNMB-211ENST00000479625 SPATA45Q537H7 98 aa4.05□□□□□ -1.76
GPNMB-211ENST00000479625 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.76
GPNMB-211ENST00000479625 BAALC-AS2P0C853 105 aa4.02□□□□□ -1.77
GPNMB-211ENST00000479625 C1orf64Q8NEQ6 169 aa4.02□□□□□ -1.77
GPNMB-211ENST00000479625 CRIPTQ9P021 101 aa4.02□□□□□ -1.77
GPNMB-211ENST00000479625 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
GPNMB-211ENST00000479625 LOC110117498A0A087WWA1 95 aa4□□□□□ -1.77
GPNMB-211ENST00000479625 HCG22E2RYF7 251 aa4□□□□□ -1.77
GPNMB-211ENST00000479625 A0A1B0GW54 56 aa3.99□□□□□ -1.77
GPNMB-211ENST00000479625 NREPQ16612 68 aa3.99□□□□□ -1.77
GPNMB-211ENST00000479625 VAMP8Q9BV40 100 aa3.98□□□□□ -1.77
GPNMB-211ENST00000479625 C14orf132Q9NPU4 83 aa3.98□□□□□ -1.77
GPNMB-211ENST00000479625 SCGB1C2P0DMR2 95 aa3.97□□□□□ -1.77
GPNMB-211ENST00000479625 S100A6P06703 90 aa3.96□□□□□ -1.78
GPNMB-211ENST00000479625 HSD52Q0P140 79 aa3.96□□□□□ -1.78
GPNMB-211ENST00000479625 A0A087WVE0 104 aa3.95□□□□□ -1.78
GPNMB-211ENST00000479625 JMJD7-PLA2G4BH0Y9G9 81 aa3.95□□□□□ -1.78
GPNMB-211ENST00000479625 CASC2Q6XLA1 102 aa3.95□□□□□ -1.78
GPNMB-211ENST00000479625 Q8N9L7 120 aa3.95□□□□□ -1.78
GPNMB-211ENST00000479625 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
GPNMB-211ENST00000479625 CXCL6P80162 114 aa3.93□□□□□ -1.78
GPNMB-211ENST00000479625 A8MUN3 132 aa3.92□□□□□ -1.78
GPNMB-211ENST00000479625 PDE6GP18545 87 aa3.92□□□□□ -1.78
GPNMB-211ENST00000479625 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
GPNMB-211ENST00000479625 LOC105371267A0A1B0GV96 52 aa3.9□□□□□ -1.79
GPNMB-211ENST00000479625 BPY2O14599 106 aa3.9□□□□□ -1.79
GPNMB-211ENST00000479625 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
GPNMB-211ENST00000479625 PLAC4Q8WY50 150 aa3.9□□□□□ -1.79
GPNMB-211ENST00000479625 ATXN8Q156A1 80 aa3.89□□□□□ -1.79
GPNMB-211ENST00000479625 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
GPNMB-211ENST00000479625 NAA38Q9BRA0 125 aaKnown RBP3.87□□□□□ -1.79
GPNMB-211ENST00000479625 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
GPNMB-211ENST00000479625 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.79
GPNMB-211ENST00000479625 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
GPNMB-211ENST00000479625 H0YAA0 97 aa3.84□□□□□ -1.79
GPNMB-211ENST00000479625 SMIM6P0DI80 62 aa3.8□□□□□ -1.8
GPNMB-211ENST00000479625 K7EP34 96 aa3.79□□□□□ -1.8
GPNMB-211ENST00000479625 NDUFC1O43677 76 aa3.77□□□□□ -1.81
GPNMB-211ENST00000479625 UQCR10Q9UDW1 63 aa3.77□□□□□ -1.81
GPNMB-211ENST00000479625 PYY3Q5JQD4 70 aa3.76□□□□□ -1.81
GPNMB-211ENST00000479625 SVIPQ8NHG7 77 aa3.76□□□□□ -1.81
GPNMB-211ENST00000479625 CYP4F30PQ9H0H9 118 aa3.76□□□□□ -1.81
GPNMB-211ENST00000479625 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
GPNMB-211ENST00000479625 R4GN34 69 aa3.75□□□□□ -1.81
GPNMB-211ENST00000479625 PCP4L1A6NKN8 68 aa3.74□□□□□ -1.81
GPNMB-211ENST00000479625 MT4P47944 62 aa3.74□□□□□ -1.81
GPNMB-211ENST00000479625 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
GPNMB-211ENST00000479625 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
GPNMB-211ENST00000479625 M0QZ58 72 aa3.73□□□□□ -1.81
GPNMB-211ENST00000479625 TSTD3H0UI37 97 aa3.72□□□□□ -1.81
GPNMB-211ENST00000479625 P0C880 135 aa3.72□□□□□ -1.81
GPNMB-211ENST00000479625 LINC01554Q52M75 96 aa3.72□□□□□ -1.81
GPNMB-211ENST00000479625 TP53AIP1Q9HCN2 124 aa3.71□□□□□ -1.82
GPNMB-211ENST00000479625 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
GPNMB-211ENST00000479625 H3BT86 120 aa3.68□□□□□ -1.82
GPNMB-211ENST00000479625 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
GPNMB-211ENST00000479625 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
GPNMB-211ENST00000479625 TRAV22A0A0B4J277 110 aa3.64□□□□□ -1.83
GPNMB-211ENST00000479625 LOC101927531A0A1B0GV80 90 aa3.64□□□□□ -1.83
GPNMB-211ENST00000479625 M0R143 59 aa3.63□□□□□ -1.83
GPNMB-211ENST00000479625 MT1EP04732 61 aa3.63□□□□□ -1.83
GPNMB-211ENST00000479625 UBL5Q9BZL1 73 aa3.63□□□□□ -1.83
GPNMB-211ENST00000479625 CYSTM1Q9H1C7 97 aa3.63□□□□□ -1.83
GPNMB-211ENST00000479625 ACYP1P07311 99 aa3.62□□□□□ -1.83
GPNMB-211ENST00000479625 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
GPNMB-211ENST00000479625 C20orf197Q8N268 126 aa3.62□□□□□ -1.83
GPNMB-211ENST00000479625 SPCS1Q9Y6A9 102 aa3.61□□□□□ -1.83
GPNMB-211ENST00000479625 BATFQ16520 125 aa3.58□□□□□ -1.84
GPNMB-211ENST00000479625 COL5A1-AS1Q5SY13 56 aa3.57□□□□□ -1.84
GPNMB-211ENST00000479625 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
GPNMB-211ENST00000479625 A0A1W2PPM0 123 aa3.54□□□□□ -1.84
GPNMB-211ENST00000479625 H0Y9P7 68 aa3.54□□□□□ -1.84
GPNMB-211ENST00000479625 A0A1B0GV90 55 aa3.53□□□□□ -1.84
GPNMB-211ENST00000479625 MT-ATP8P03928 68 aa3.52□□□□□ -1.85
GPNMB-211ENST00000479625 MT1GP13640 62 aa3.51□□□□□ -1.85
GPNMB-211ENST00000479625 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
GPNMB-211ENST00000479625 MT1MQ8N339 61 aa3.5□□□□□ -1.85
GPNMB-211ENST00000479625 TAX1BP3O14907 124 aa3.49□□□□□ -1.85
GPNMB-211ENST00000479625 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
GPNMB-211ENST00000479625 ATOX1O00244 68 aa3.48□□□□□ -1.85
GPNMB-211ENST00000479625 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
GPNMB-211ENST00000479625 GTF2H5Q6ZYL4 71 aa3.47□□□□□ -1.85
GPNMB-211ENST00000479625 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
GPNMB-211ENST00000479625 UQCRQO14949 82 aa3.46□□□□□ -1.86
GPNMB-211ENST00000479625 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
GPNMB-211ENST00000479625 LINC00208Q96KT6 92 aa3.45□□□□□ -1.86
GPNMB-211ENST00000479625 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
GPNMB-211ENST00000479625 PRO0461Q9UI25 63 aa3.43□□□□□ -1.86
GPNMB-211ENST00000479625 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
GPNMB-211ENST00000479625 MT1LQ93083 61 aa3.4□□□□□ -1.87
GPNMB-211ENST00000479625 F8W1H4 67 aa3.39□□□□□ -1.87
GPNMB-211ENST00000479625 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
GPNMB-211ENST00000479625 DMAC1Q96GE9 116 aa3.38□□□□□ -1.87
GPNMB-211ENST00000479625 A0A0D9SG42 100 aa3.37□□□□□ -1.87
GPNMB-211ENST00000479625 HIST1H4AP62805 103 aaKnown RBP3.37□□□□□ -1.87
GPNMB-211ENST00000479625 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms