RNA–Protein interactions for RNA: ENST00000479402.1

ACTR3B-204, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 2

Gene ACTR3B, Length 5,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-204ENST00000479402 ALMS1Q8TCU4 4167 aa5.36□□□□□ -1.55
ACTR3B-204ENST00000479402 KRTAP10-4P60372 401 aaPredicted RBP5.35□□□□□ -1.55
ACTR3B-204ENST00000479402 PLECQ15149 4684 aaKnown RBP5.33□□□□□ -1.56
ACTR3B-204ENST00000479402 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
ACTR3B-204ENST00000479402 ANK2Q01484 3957 aa5.33□□□□□ -1.56
ACTR3B-204ENST00000479402 CSMD3Q7Z407 3707 aa5.33□□□□□ -1.56
ACTR3B-204ENST00000479402 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
ACTR3B-204ENST00000479402 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
ACTR3B-204ENST00000479402 DNAH5Q8TE73 4624 aa5.25□□□□□ -1.57
ACTR3B-204ENST00000479402 STARD9Q9P2P6 4700 aa5.23□□□□□ -1.57
ACTR3B-204ENST00000479402 DNAH1Q9P2D7 4330 aa5.22□□□□□ -1.57
ACTR3B-204ENST00000479402 VPS13DQ5THJ4 4388 aa5.18□□□□□ -1.58
ACTR3B-204ENST00000479402 CRCT1Q9UGL9 99 aa5.16□□□□□ -1.58
ACTR3B-204ENST00000479402 DNAH11Q96DT5 4516 aa5.15□□□□□ -1.58
ACTR3B-204ENST00000479402 CMYA5Q8N3K9 4069 aa5.12□□□□□ -1.59
ACTR3B-204ENST00000479402 DYNC1H1Q14204 4646 aaKnown RBP5.11□□□□□ -1.59
ACTR3B-204ENST00000479402 DNAH10Q8IVF4 4471 aa5.09□□□□□ -1.59
ACTR3B-204ENST00000479402 LORP23490 312 aaPredicted RBP5.09□□□□□ -1.59
ACTR3B-204ENST00000479402 LRP1BQ9NZR2 4599 aa5.07□□□□□ -1.6
ACTR3B-204ENST00000479402 DNAH3Q8TD57 4116 aa5.07□□□□□ -1.6
ACTR3B-204ENST00000479402 KMT2AQ03164 3969 aa5.05□□□□□ -1.6
ACTR3B-204ENST00000479402 FAT1Q14517 4588 aa5.04□□□□□ -1.6
ACTR3B-204ENST00000479402 DNAH2Q9P225 4427 aa5.04□□□□□ -1.6
ACTR3B-204ENST00000479402 DNAH17Q9UFH2 4485 aa5.04□□□□□ -1.6
ACTR3B-204ENST00000479402 RYR1P21817 5038 aa5□□□□□ -1.61
ACTR3B-204ENST00000479402 DYNC2H1Q8NCM8 4307 aaKnown RBP4.98□□□□□ -1.61
ACTR3B-204ENST00000479402 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
ACTR3B-204ENST00000479402 RYR3Q15413 4870 aa4.95□□□□□ -1.62
ACTR3B-204ENST00000479402 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
ACTR3B-204ENST00000479402 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
ACTR3B-204ENST00000479402 SACSQ9NZJ4 4579 aa4.94□□□□□ -1.62
ACTR3B-204ENST00000479402 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
ACTR3B-204ENST00000479402 LYSTQ99698 3801 aa4.91□□□□□ -1.62
ACTR3B-204ENST00000479402 RYR2Q92736 4967 aa4.9□□□□□ -1.62
ACTR3B-204ENST00000479402 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
ACTR3B-204ENST00000479402 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
ACTR3B-204ENST00000479402 HYDINQ4G0P3 5121 aa4.84□□□□□ -1.63
ACTR3B-204ENST00000479402 DNAH7Q8WXX0 4024 aa4.84□□□□□ -1.64
ACTR3B-204ENST00000479402 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
ACTR3B-204ENST00000479402 MT1HP80294 61 aa4.81□□□□□ -1.64
ACTR3B-204ENST00000479402 DNAH8Q96JB1 4490 aa4.8□□□□□ -1.64
ACTR3B-204ENST00000479402 VPS13BQ7Z7G8 4022 aa4.8□□□□□ -1.64
ACTR3B-204ENST00000479402 APOBP04114 4563 aaKnown RBP4.79□□□□□ -1.64
ACTR3B-204ENST00000479402 BIRC6Q9NR09 4857 aa4.79□□□□□ -1.64
ACTR3B-204ENST00000479402 DNAH6Q9C0G6 4158 aa4.78□□□□□ -1.64
ACTR3B-204ENST00000479402 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
ACTR3B-204ENST00000479402 KMT2CQ8NEZ4 4911 aaKnown RBP4.77□□□□□ -1.65
ACTR3B-204ENST00000479402 MT2AP02795 61 aa4.76□□□□□ -1.65
ACTR3B-204ENST00000479402 HERC2O95714 4834 aa4.73□□□□□ -1.65
ACTR3B-204ENST00000479402 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
ACTR3B-204ENST00000479402 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
ACTR3B-204ENST00000479402 HECTD4Q9Y4D8 3996 aa4.67□□□□□ -1.66
ACTR3B-204ENST00000479402 PKHD1P08F94 4074 aa4.67□□□□□ -1.66
ACTR3B-204ENST00000479402 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
ACTR3B-204ENST00000479402 HSPG2P98160 4391 aa4.66□□□□□ -1.66
ACTR3B-204ENST00000479402 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
ACTR3B-204ENST00000479402 MT1FP04733 61 aa4.62□□□□□ -1.67
ACTR3B-204ENST00000479402 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
ACTR3B-204ENST00000479402 FRAS1Q86XX4 4008 aa4.6□□□□□ -1.67
ACTR3B-204ENST00000479402 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
ACTR3B-204ENST00000479402 FAT3Q8TDW7 4589 aa4.6□□□□□ -1.67
ACTR3B-204ENST00000479402 PKD1P98161 4303 aa4.55□□□□□ -1.68
ACTR3B-204ENST00000479402 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
ACTR3B-204ENST00000479402 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
ACTR3B-204ENST00000479402 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
ACTR3B-204ENST00000479402 LRP2P98164 4655 aa4.42□□□□□ -1.7
ACTR3B-204ENST00000479402 PCLOQ9Y6V0 5065 aa4.42□□□□□ -1.7
ACTR3B-204ENST00000479402 HERC1Q15751 4861 aa4.41□□□□□ -1.7
ACTR3B-204ENST00000479402 KRTAP19-1Q8IUB9 90 aa4.37□□□□□ -1.71
ACTR3B-204ENST00000479402 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
ACTR3B-204ENST00000479402 LPAP08519 4548 aa4.35□□□□□ -1.71
ACTR3B-204ENST00000479402 MT1XP80297 61 aa4.33□□□□□ -1.72
ACTR3B-204ENST00000479402 PKHD1L1Q86WI1 4243 aa4.31□□□□□ -1.72
ACTR3B-204ENST00000479402 TNXBP22105 4242 aa4.27□□□□□ -1.73
ACTR3B-204ENST00000479402 SPRR2EP22531 72 aa4.25□□□□□ -1.73
ACTR3B-204ENST00000479402 SPRR2BP35325 72 aa4.25□□□□□ -1.73
ACTR3B-204ENST00000479402 SPRR2AP35326 72 aa4.25□□□□□ -1.73
ACTR3B-204ENST00000479402 MT1BP07438 61 aa4.24□□□□□ -1.73
ACTR3B-204ENST00000479402 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
ACTR3B-204ENST00000479402 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
ACTR3B-204ENST00000479402 LCE2CQ5TA81 110 aa4.21□□□□□ -1.74
ACTR3B-204ENST00000479402 MT1GP13640 62 aa4.19□□□□□ -1.74
ACTR3B-204ENST00000479402 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
ACTR3B-204ENST00000479402 LCE2BO14633 110 aa4.14□□□□□ -1.75
ACTR3B-204ENST00000479402 SPRR2DP22532 72 aa4.14□□□□□ -1.75
ACTR3B-204ENST00000479402 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
ACTR3B-204ENST00000479402 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
ACTR3B-204ENST00000479402 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
ACTR3B-204ENST00000479402 KRTAP19-2Q3LHN2 52 aa4.08□□□□□ -1.76
ACTR3B-204ENST00000479402 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
ACTR3B-204ENST00000479402 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
ACTR3B-204ENST00000479402 HMCN2Q8NDA2 5059 aa4.05□□□□□ -1.76
ACTR3B-204ENST00000479402 FAT4Q6V0I7 4981 aa4.02□□□□□ -1.77
ACTR3B-204ENST00000479402 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
ACTR3B-204ENST00000479402 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
ACTR3B-204ENST00000479402 MT1LQ93083 61 aa4.01□□□□□ -1.77
ACTR3B-204ENST00000479402 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
ACTR3B-204ENST00000479402 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
ACTR3B-204ENST00000479402 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
ACTR3B-204ENST00000479402 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms