RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 C8orf17Q9NRJ1 99 aa3.06□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BKO60814 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BJP06899 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BOP23527 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BBP33778 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BDP58876 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BCP62807 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 RPS28P62857 69 aaKnown RBP3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST2H2BEQ16778 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BHQ93079 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BNQ99877 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BMQ99879 126 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 S4R3F8 94 aa3.05□□□□□ -1.92
PTPRN-214ENST00000477819 PRR15Q8IV56 129 aa3.04□□□□□ -1.92
PTPRN-214ENST00000477819 HIST1H2BLQ99880 126 aa3.04□□□□□ -1.92
PTPRN-214ENST00000477819 J3KT08 172 aa3.03□□□□□ -1.92
PTPRN-214ENST00000477819 SNCGO76070 127 aa3.03□□□□□ -1.92
PTPRN-214ENST00000477819 MT4P47944 62 aa3.03□□□□□ -1.92
PTPRN-214ENST00000477819 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
PTPRN-214ENST00000477819 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
PTPRN-214ENST00000477819 NDUFB1O75438 58 aa3.02□□□□□ -1.93
PTPRN-214ENST00000477819 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
PTPRN-214ENST00000477819 CRIPTQ9P021 101 aa3.02□□□□□ -1.93
PTPRN-214ENST00000477819 A0A1B0GX51 115 aa3.01□□□□□ -1.93
PTPRN-214ENST00000477819 H0YGX0 51 aa3.01□□□□□ -1.93
PTPRN-214ENST00000477819 KRTDAPP60985 99 aa3.01□□□□□ -1.93
PTPRN-214ENST00000477819 COL5A1-AS1Q5SY13 56 aa3.01□□□□□ -1.93
PTPRN-214ENST00000477819 Q5W150 140 aa3.01□□□□□ -1.93
PTPRN-214ENST00000477819 C7orf65Q6ZTY9 151 aa3.01□□□□□ -1.93
PTPRN-214ENST00000477819 C2orf91Q6ZV80 131 aa3.01□□□□□ -1.93
PTPRN-214ENST00000477819 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
PTPRN-214ENST00000477819 A8MUN3 132 aa2.99□□□□□ -1.93
PTPRN-214ENST00000477819 K7ERU9 68 aa2.99□□□□□ -1.93
PTPRN-214ENST00000477819 C9JAW5 83 aa2.98□□□□□ -1.93
PTPRN-214ENST00000477819 VAMP8Q9BV40 100 aa2.98□□□□□ -1.93
PTPRN-214ENST00000477819 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
PTPRN-214ENST00000477819 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
PTPRN-214ENST00000477819 MRPL34Q9BQ48 92 aaKnown RBP2.97□□□□□ -1.93
PTPRN-214ENST00000477819 UQCR10Q9UDW1 63 aa2.97□□□□□ -1.93
PTPRN-214ENST00000477819 J3QR89 54 aa2.96□□□□□ -1.94
PTPRN-214ENST00000477819 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
PTPRN-214ENST00000477819 MMP24-AS1A0A0U1RRL7 71 aa2.95□□□□□ -1.94
PTPRN-214ENST00000477819 CEND1Q8N111 149 aa2.95□□□□□ -1.94
PTPRN-214ENST00000477819 TMEM254Q8TBM7 123 aa2.95□□□□□ -1.94
PTPRN-214ENST00000477819 ORMDL1Q9P0S3 153 aa2.95□□□□□ -1.94
PTPRN-214ENST00000477819 K7EQZ3 153 aa2.94□□□□□ -1.94
PTPRN-214ENST00000477819 K7ERS5 55 aa2.94□□□□□ -1.94
PTPRN-214ENST00000477819 BPY2O14599 106 aa2.94□□□□□ -1.94
PTPRN-214ENST00000477819 SPATA45Q537H7 98 aa2.94□□□□□ -1.94
PTPRN-214ENST00000477819 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
PTPRN-214ENST00000477819 Q6ZQT0 140 aa2.94□□□□□ -1.94
PTPRN-214ENST00000477819 C1orf64Q8NEQ6 169 aa2.94□□□□□ -1.94
PTPRN-214ENST00000477819 A0A1B0GW54 56 aa2.93□□□□□ -1.94
PTPRN-214ENST00000477819 TAX1BP3O14907 124 aa2.92□□□□□ -1.94
PTPRN-214ENST00000477819 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
PTPRN-214ENST00000477819 hDV103S1A0JD37 113 aa2.91□□□□□ -1.94
PTPRN-214ENST00000477819 TMEM256-PLSCR3K7ERE1 68 aa2.91□□□□□ -1.94
PTPRN-214ENST00000477819 DNAL4O96015 105 aa2.91□□□□□ -1.94
PTPRN-214ENST00000477819 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
PTPRN-214ENST00000477819 A0A087WVE0 104 aa2.89□□□□□ -1.95
PTPRN-214ENST00000477819 A0A0B4J2C4 111 aa2.89□□□□□ -1.95
PTPRN-214ENST00000477819 A6NED7 52 aa2.89□□□□□ -1.95
PTPRN-214ENST00000477819 PDE6GP18545 87 aa2.89□□□□□ -1.95
PTPRN-214ENST00000477819 H3BQ85 93 aa2.88□□□□□ -1.95
PTPRN-214ENST00000477819 K7EP34 96 aa2.86□□□□□ -1.95
PTPRN-214ENST00000477819 LINC01554Q52M75 96 aa2.85□□□□□ -1.95
PTPRN-214ENST00000477819 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
PTPRN-214ENST00000477819 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
PTPRN-214ENST00000477819 PRO1854Q9UHT4 67 aa2.85□□□□□ -1.95
PTPRN-214ENST00000477819 HCG22E2RYF7 251 aa2.84□□□□□ -1.95
PTPRN-214ENST00000477819 HIST1H4AP62805 103 aaKnown RBP2.84□□□□□ -1.95
PTPRN-214ENST00000477819 HSD52Q0P140 79 aa2.84□□□□□ -1.95
PTPRN-214ENST00000477819 ADM2Q7Z4H4 148 aa2.84□□□□□ -1.95
PTPRN-214ENST00000477819 COX8AP10176 69 aa2.83□□□□□ -1.96
PTPRN-214ENST00000477819 CYSTM1Q9H1C7 97 aa2.83□□□□□ -1.96
PTPRN-214ENST00000477819 A0A1W2PPM0 123 aa2.82□□□□□ -1.96
PTPRN-214ENST00000477819 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
PTPRN-214ENST00000477819 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
PTPRN-214ENST00000477819 F8W1H4 67 aa2.81□□□□□ -1.96
PTPRN-214ENST00000477819 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
PTPRN-214ENST00000477819 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
PTPRN-214ENST00000477819 H0YAA0 97 aa2.8□□□□□ -1.96
PTPRN-214ENST00000477819 MT1EP04732 61 aa2.8□□□□□ -1.96
PTPRN-214ENST00000477819 NREPQ16612 68 aa2.8□□□□□ -1.96
PTPRN-214ENST00000477819 NAA38Q9BRA0 125 aaKnown RBP2.8□□□□□ -1.96
PTPRN-214ENST00000477819 FXYD2P54710 66 aa2.79□□□□□ -1.96
PTPRN-214ENST00000477819 HIGD1BQ9P298 99 aa2.79□□□□□ -1.96
PTPRN-214ENST00000477819 K7ERJ3 54 aa2.78□□□□□ -1.96
PTPRN-214ENST00000477819 BAALC-AS2P0C853 105 aa2.78□□□□□ -1.96
PTPRN-214ENST00000477819 CASC2Q6XLA1 102 aa2.77□□□□□ -1.97
PTPRN-214ENST00000477819 R4GN34 69 aa2.77□□□□□ -1.97
PTPRN-214ENST00000477819 LOC110117498A0A087WWA1 95 aa2.76□□□□□ -1.97
PTPRN-214ENST00000477819 H3BT86 120 aa2.76□□□□□ -1.97
PTPRN-214ENST00000477819 Q8N9L7 120 aa2.76□□□□□ -1.97
PTPRN-214ENST00000477819 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
PTPRN-214ENST00000477819 A8MU10 97 aa2.75□□□□□ -1.97
PTPRN-214ENST00000477819 M0QZ58 72 aa2.75□□□□□ -1.97
PTPRN-214ENST00000477819 UQCRQO14949 82 aa2.75□□□□□ -1.97
PTPRN-214ENST00000477819 COX6CP09669 75 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms