RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 NDUFB1O75438 58 aa2.68□□□□□ -1.98
LINC00173-202ENST00000477702 CCKP06307 115 aa2.68□□□□□ -1.98
LINC00173-202ENST00000477702 SPATA45Q537H7 98 aa2.68□□□□□ -1.98
LINC00173-202ENST00000477702 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
LINC00173-202ENST00000477702 ANAPC13Q9BS18 74 aa2.68□□□□□ -1.98
LINC00173-202ENST00000477702 IMUPQ9GZP8 106 aa2.68□□□□□ -1.98
LINC00173-202ENST00000477702 HIGD1BQ9P298 99 aa2.68□□□□□ -1.98
LINC00173-202ENST00000477702 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
LINC00173-202ENST00000477702 RPS28P62857 69 aaKnown RBP2.67□□□□□ -1.98
LINC00173-202ENST00000477702 Q8N9L7 120 aa2.67□□□□□ -1.98
LINC00173-202ENST00000477702 DSCR8Q96T75 97 aa2.67□□□□□ -1.98
LINC00173-202ENST00000477702 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
LINC00173-202ENST00000477702 FAM236AA0A1B0GUQ0 79 aa2.66□□□□□ -1.98
LINC00173-202ENST00000477702 FAM236BA0A1B0GV22 79 aa2.66□□□□□ -1.98
LINC00173-202ENST00000477702 J3KT08 172 aa2.66□□□□□ -1.98
LINC00173-202ENST00000477702 DEFB116Q30KQ4 102 aa2.66□□□□□ -1.98
LINC00173-202ENST00000477702 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
LINC00173-202ENST00000477702 SCGB1C2P0DMR2 95 aa2.65□□□□□ -1.99
LINC00173-202ENST00000477702 RBM3P98179 157 aaKnown RBP2.65□□□□□ -1.99
LINC00173-202ENST00000477702 A0A1B0GVX0 72 aa2.64□□□□□ -1.99
LINC00173-202ENST00000477702 F8W1H4 67 aa2.64□□□□□ -1.99
LINC00173-202ENST00000477702 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
LINC00173-202ENST00000477702 ZCCHC13Q8WW36 166 aaKnown RBP2.64□□□□□ -1.99
LINC00173-202ENST00000477702 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
LINC00173-202ENST00000477702 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
LINC00173-202ENST00000477702 LINC00472Q9H8W2 130 aa2.64□□□□□ -1.99
LINC00173-202ENST00000477702 V9GYY9 64 aa2.64□□□□□ -1.99
LINC00173-202ENST00000477702 C9JAW5 83 aa2.63□□□□□ -1.99
LINC00173-202ENST00000477702 H1FX-AS1Q4G0G2 97 aa2.63□□□□□ -1.99
LINC00173-202ENST00000477702 PRO0628Q9UI54 55 aa2.63□□□□□ -1.99
LINC00173-202ENST00000477702 A0A1W2PPM0 123 aa2.62□□□□□ -1.99
LINC00173-202ENST00000477702 SPCS1Q9Y6A9 102 aa2.62□□□□□ -1.99
LINC00173-202ENST00000477702 A0A1B0GW54 56 aa2.61□□□□□ -1.99
LINC00173-202ENST00000477702 FXYD2P54710 66 aa2.61□□□□□ -1.99
LINC00173-202ENST00000477702 C2orf91Q6ZV80 131 aa2.61□□□□□ -1.99
LINC00173-202ENST00000477702 CCDC179H3BU77 68 aa2.6□□□□□ -1.99
LINC00173-202ENST00000477702 MT-ATP8P03928 68 aa2.6□□□□□ -1.99
LINC00173-202ENST00000477702 BAALC-AS2P0C853 105 aa2.6□□□□□ -1.99
LINC00173-202ENST00000477702 PDE6GP18545 87 aa2.6□□□□□ -1.99
LINC00173-202ENST00000477702 IGKV3D-7A0A0C4DH55 119 aa2.59□□□□□ -1.99
LINC00173-202ENST00000477702 JMJD7-PLA2G4BH0Y9G9 81 aa2.59□□□□□ -1.99
LINC00173-202ENST00000477702 Q6ZQT0 140 aa2.59□□□□□ -1.99
LINC00173-202ENST00000477702 NDUFS5O43920 106 aa2.58□□□□□ -2
LINC00173-202ENST00000477702 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
LINC00173-202ENST00000477702 NAA38Q9BRA0 125 aaKnown RBP2.58□□□□□ -2
LINC00173-202ENST00000477702 K7ERJ3 54 aa2.57□□□□□ -2
LINC00173-202ENST00000477702 ATXN8Q156A1 80 aa2.57□□□□□ -2
LINC00173-202ENST00000477702 NREPQ16612 68 aa2.57□□□□□ -2
LINC00173-202ENST00000477702 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
LINC00173-202ENST00000477702 C8orf17Q9NRJ1 99 aa2.57□□□□□ -2
LINC00173-202ENST00000477702 C4orf26Q17RF5 130 aa2.56□□□□□ -2
LINC00173-202ENST00000477702 ETDBQ3ZM63 59 aa2.56□□□□□ -2
LINC00173-202ENST00000477702 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
LINC00173-202ENST00000477702 UQCRQO14949 82 aa2.55□□□□□ -2
LINC00173-202ENST00000477702 PRR15Q8IV56 129 aa2.55□□□□□ -2
LINC00173-202ENST00000477702 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
LINC00173-202ENST00000477702 TMEM258P61165 79 aa2.54□□□□□ -2
LINC00173-202ENST00000477702 TMEM254Q8TBM7 123 aa2.54□□□□□ -2
LINC00173-202ENST00000477702 MRPL34Q9BQ48 92 aaKnown RBP2.54□□□□□ -2
LINC00173-202ENST00000477702 hDV103S1A0JD37 113 aa2.53□□□□□ -2
LINC00173-202ENST00000477702 MT1XP80297 61 aa2.53□□□□□ -2
LINC00173-202ENST00000477702 C7orf65Q6ZTY9 151 aa2.52□□□□□ -2.01
LINC00173-202ENST00000477702 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
LINC00173-202ENST00000477702 C14orf132Q9NPU4 83 aa2.52□□□□□ -2.01
LINC00173-202ENST00000477702 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
LINC00173-202ENST00000477702 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
LINC00173-202ENST00000477702 KLKP1Q107X0 134 aa2.51□□□□□ -2.01
LINC00173-202ENST00000477702 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
LINC00173-202ENST00000477702 FAM240AA0A1B0GVK7 77 aa2.5□□□□□ -2.01
LINC00173-202ENST00000477702 BPY2O14599 106 aa2.5□□□□□ -2.01
LINC00173-202ENST00000477702 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
LINC00173-202ENST00000477702 MMP24-AS1A0A0U1RRL7 71 aa2.49□□□□□ -2.01
LINC00173-202ENST00000477702 COX7CP15954 63 aa2.49□□□□□ -2.01
LINC00173-202ENST00000477702 MT4P47944 62 aa2.49□□□□□ -2.01
LINC00173-202ENST00000477702 PMAIP1Q13794 54 aa2.49□□□□□ -2.01
LINC00173-202ENST00000477702 CSAG1Q6PB30 78 aa2.48□□□□□ -2.01
LINC00173-202ENST00000477702 CASC2Q6XLA1 102 aa2.48□□□□□ -2.01
LINC00173-202ENST00000477702 LCA10Q71F78 164 aa2.48□□□□□ -2.01
LINC00173-202ENST00000477702 HCG22E2RYF7 251 aa2.47□□□□□ -2.01
LINC00173-202ENST00000477702 K7EQZ3 153 aa2.47□□□□□ -2.01
LINC00173-202ENST00000477702 SMIM26A0A096LP01 95 aa2.46□□□□□ -2.02
LINC00173-202ENST00000477702 ATOX1O00244 68 aa2.46□□□□□ -2.02
LINC00173-202ENST00000477702 ACYP1P07311 99 aa2.46□□□□□ -2.02
LINC00173-202ENST00000477702 SERP1Q9Y6X1 66 aa2.46□□□□□ -2.02
LINC00173-202ENST00000477702 S4R3F8 94 aa2.46□□□□□ -2.02
LINC00173-202ENST00000477702 H3BT86 120 aa2.45□□□□□ -2.02
LINC00173-202ENST00000477702 HIST1H4AP62805 103 aaKnown RBP2.45□□□□□ -2.02
LINC00173-202ENST00000477702 Q5W150 140 aa2.44□□□□□ -2.02
LINC00173-202ENST00000477702 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
LINC00173-202ENST00000477702 UBL5Q9BZL1 73 aa2.44□□□□□ -2.02
LINC00173-202ENST00000477702 LINC00643Q86TS7 51 aa2.43□□□□□ -2.02
LINC00173-202ENST00000477702 SERP2Q8N6R1 65 aa2.43□□□□□ -2.02
LINC00173-202ENST00000477702 C1orf64Q8NEQ6 169 aa2.43□□□□□ -2.02
LINC00173-202ENST00000477702 TP53AIP1Q9HCN2 124 aa2.43□□□□□ -2.02
LINC00173-202ENST00000477702 CRIPTQ9P021 101 aa2.43□□□□□ -2.02
LINC00173-202ENST00000477702 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
LINC00173-202ENST00000477702 ATP5EP56381 51 aaPredicted RBP2.41□□□□□ -2.02
LINC00173-202ENST00000477702 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
LINC00173-202ENST00000477702 PLAC4Q8WY50 150 aa2.39□□□□□ -2.03
LINC00173-202ENST00000477702 KRTAP4-3Q9BYR4 195 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms