RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 LOC400499M0QZD8 3231 aa0.19□□□□□ -2.38
GINS1-202ENST00000473460 CCDC168Q8NDH2 2452 aa0.19□□□□□ -2.38
GINS1-202ENST00000473460 MAST4O15021 2626 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 USP9YO00507 2555 aaPredicted RBP0.18□□□□□ -2.38
GINS1-202ENST00000473460 SPTBN4Q9H254 2564 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 MKI67P46013 3256 aaKnown RBP0.18□□□□□ -2.38
GINS1-202ENST00000473460 BOD1L1Q8NFC6 3051 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 PKD1L2Q7Z442 2459 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 H0YGG7 62 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 U3KQA8 63 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 NBEAL2Q6ZNJ1 2754 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 UNC80Q8N2C7 3258 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
GINS1-202ENST00000473460 LRBAP50851 2863 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 NBASA2RRP1 2371 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 WDFY4Q6ZS81 3184 aa0.18□□□□□ -2.38
GINS1-202ENST00000473460 SETXQ7Z333 2677 aaKnown RBP0.18□□□□□ -2.38
GINS1-202ENST00000473460 UNC79Q9P2D8 2635 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 PRUNE2Q8WUY3 3088 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 WDFY3Q8IZQ1 3526 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
GINS1-202ENST00000473460 ANKRD11Q6UB99 2663 aaPredicted RBP0.17□□□□□ -2.38
GINS1-202ENST00000473460 MAP1AP78559 2803 aaPredicted RBP0.17□□□□□ -2.38
GINS1-202ENST00000473460 ZANQ9Y493 2812 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 MUC17Q685J3 4493 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 C9orf92A6NGG3 77 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 SPRR2DP22532 72 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 PRCDQ00LT1 54 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 TOMM7Q9P0U1 55 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 FAT4Q6V0I7 4981 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 WDR87Q6ZQQ6 2873 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 ACANP16112 2415 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 UTRNP46939 3433 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 DNAH12Q6ZR08 3092 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 HMCN2Q8NDA2 5059 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 NBEAQ8NFP9 2946 aa0.17□□□□□ -2.38
GINS1-202ENST00000473460 MAP1BP46821 2468 aaKnown RBP0.16□□□□□ -2.38
GINS1-202ENST00000473460 FREM2Q5SZK8 3169 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 LRP2P98164 4655 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 SPEGQ15772 3267 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 HIVEP3Q5T1R4 2406 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 FLNBO75369 2602 aaKnown RBP0.16□□□□□ -2.38
GINS1-202ENST00000473460 H3BSH0 61 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 M0QZ58 72 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 TNP1P09430 55 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 SPRR2BP35325 72 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 ACACAQ13085 2346 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 ITPR1Q14643 2758 aa0.16□□□□□ -2.38
GINS1-202ENST00000473460 APC2O95996 2303 aa0.15□□□□□ -2.38
GINS1-202ENST00000473460 NIPBLQ6KC79 2804 aaeCLIP0.15□□□□□ -2.38
GINS1-202ENST00000473460 TGP01266 2768 aa0.15□□□□□ -2.39
GINS1-202ENST00000473460 CACNA1AO00555 2505 aa0.15□□□□□ -2.39
GINS1-202ENST00000473460 TEP1Q99973 2627 aaKnown RBP0.15□□□□□ -2.39
GINS1-202ENST00000473460 H3BNG1 76 aa0.15□□□□□ -2.39
GINS1-202ENST00000473460 KRTAP6-2Q3LI66 62 aa0.15□□□□□ -2.39
GINS1-202ENST00000473460 MXRA5Q9NR99 2828 aa0.15□□□□□ -2.39
GINS1-202ENST00000473460 CHD8Q9HCK8 2581 aa0.15□□□□□ -2.39
GINS1-202ENST00000473460 LAMA1P25391 3075 aa0.15□□□□□ -2.39
GINS1-202ENST00000473460 DEFB110Q30KQ9 67 aa0.14□□□□□ -2.39
GINS1-202ENST00000473460 KRTAP8-1Q8IUC2 63 aa0.14□□□□□ -2.39
GINS1-202ENST00000473460 DEFB104AQ8WTQ1 72 aa0.14□□□□□ -2.39
GINS1-202ENST00000473460 ACACBO00763 2458 aa0.14□□□□□ -2.39
GINS1-202ENST00000473460 LAMA2P24043 3122 aaKnown RBP0.14□□□□□ -2.39
GINS1-202ENST00000473460 CEP350Q5VT06 3117 aa0.14□□□□□ -2.39
GINS1-202ENST00000473460 ADGRG4Q8IZF6 3080 aa0.14□□□□□ -2.39
GINS1-202ENST00000473460 NCOR2Q9Y618 2525 aa0.14□□□□□ -2.39
GINS1-202ENST00000473460 SRCAPQ6ZRS2 3230 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 SSPOA2VEC9 5147 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 BRCA2P51587 3418 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 PTPN13Q12923 2485 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 LRRK2Q5S007 2527 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 CFAP47Q6ZTR5 3102 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 K7EIM0 57 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 SPRR2AP35326 72 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 KRTAP19-5Q3LI72 72 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 UTP20O75691 2785 aaKnown RBP0.13□□□□□ -2.39
GINS1-202ENST00000473460 IGSF10Q6WRI0 2623 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 ANKHD1Q8IWZ3 2542 aaKnown RBP0.13□□□□□ -2.39
GINS1-202ENST00000473460 TLN2Q9Y4G6 2542 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 SONP18583 2426 aaKnown RBP0.13□□□□□ -2.39
GINS1-202ENST00000473460 SPG11Q96JI7 2443 aa0.13□□□□□ -2.39
GINS1-202ENST00000473460 GOLGB1Q14789 3259 aaKnown RBP0.12□□□□□ -2.39
GINS1-202ENST00000473460 USP9XQ93008 2570 aaPredicted RBP0.12□□□□□ -2.39
GINS1-202ENST00000473460 EPG5Q9HCE0 2579 aa0.12□□□□□ -2.39
GINS1-202ENST00000473460 VCANP13611 3396 aa0.12□□□□□ -2.39
GINS1-202ENST00000473460 MT1AP04731 61 aa0.12□□□□□ -2.39
GINS1-202ENST00000473460 SPRR2EP22531 72 aa0.12□□□□□ -2.39
GINS1-202ENST00000473460 TMEM167AQ8TBQ9 72 aa0.12□□□□□ -2.39
GINS1-202ENST00000473460 SPRR2FQ96RM1 72 aa0.12□□□□□ -2.39
GINS1-202ENST00000473460 PCNTO95613 3336 aa0.12□□□□□ -2.39
GINS1-202ENST00000473460 EYSQ5T1H1 3165 aa0.12□□□□□ -2.39
GINS1-202ENST00000473460 MTORP42345 2549 aa0.12□□□□□ -2.39
GINS1-202ENST00000473460 FAM186AA6NE01 2351 aa0.11□□□□□ -2.39
GINS1-202ENST00000473460 FASNP49327 2511 aaKnown RBP0.11□□□□□ -2.39
GINS1-202ENST00000473460 TEX15Q9BXT5 2789 aa0.11□□□□□ -2.39
GINS1-202ENST00000473460 SMR3BP02814 79 aaPredicted RBP0.11□□□□□ -2.39
GINS1-202ENST00000473460 MYO18BQ8IUG5 2567 aa0.11□□□□□ -2.39
GINS1-202ENST00000473460 VPS13AQ96RL7 3174 aa0.11□□□□□ -2.39
GINS1-202ENST00000473460 RIF1Q5UIP0 2472 aaKnown RBP0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms