RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 C9orf163Q8N9P6 203 aa1.57□□□□□ -2.16
RGPD6-208ENST00000473101 LINC00472Q9H8W2 130 aa1.57□□□□□ -2.16
RGPD6-208ENST00000473101 DNAH17Q9UFH2 4485 aa1.57□□□□□ -2.16
RGPD6-208ENST00000473101 CSMD3Q7Z407 3707 aa1.56□□□□□ -2.16
RGPD6-208ENST00000473101 A0A096LNI7 61 aa1.56□□□□□ -2.16
RGPD6-208ENST00000473101 MMP24-AS1A0A0U1RRL7 71 aa1.56□□□□□ -2.16
RGPD6-208ENST00000473101 LOC101927531A0A1B0GV80 90 aa1.56□□□□□ -2.16
RGPD6-208ENST00000473101 ASB16-AS1Q495Z4 193 aa1.56□□□□□ -2.16
RGPD6-208ENST00000473101 ATP11AUNQ6ZP68 121 aa1.56□□□□□ -2.16
RGPD6-208ENST00000473101 WFDC13Q8IUB5 93 aa1.56□□□□□ -2.16
RGPD6-208ENST00000473101 DNAH2Q9P225 4427 aa1.56□□□□□ -2.16
RGPD6-208ENST00000473101 CHKB-CPT1BH3BT56 60 aa1.55□□□□□ -2.16
RGPD6-208ENST00000473101 PRLHP81277 87 aa1.55□□□□□ -2.16
RGPD6-208ENST00000473101 COA5Q86WW8 74 aa1.55□□□□□ -2.16
RGPD6-208ENST00000473101 KRTAP13-1Q8IUC0 172 aa1.55□□□□□ -2.16
RGPD6-208ENST00000473101 UBE2DNLQ8IWF7 75 aa1.55□□□□□ -2.16
RGPD6-208ENST00000473101 DNAH8Q96JB1 4490 aa1.55□□□□□ -2.16
RGPD6-208ENST00000473101 NUPR2A6NF83 97 aa1.54□□□□□ -2.16
RGPD6-208ENST00000473101 Q5VV11 94 aa1.54□□□□□ -2.16
RGPD6-208ENST00000473101 PRR15LQ9BU68 103 aa1.54□□□□□ -2.16
RGPD6-208ENST00000473101 CDC42SE1Q9NRR8 79 aa1.54□□□□□ -2.16
RGPD6-208ENST00000473101 LINC01558Q9Y6Z2 57 aa1.54□□□□□ -2.16
RGPD6-208ENST00000473101 MEGF8Q7Z7M0 2845 aa1.54□□□□□ -2.16
RGPD6-208ENST00000473101 Q6ZRN7 208 aaPredicted RBP1.53□□□□□ -2.16
RGPD6-208ENST00000473101 PHF5AQ7RTV0 110 aaKnown RBP1.53□□□□□ -2.16
RGPD6-208ENST00000473101 FRAS1Q86XX4 4008 aa1.53□□□□□ -2.16
RGPD6-208ENST00000473101 MRPL34Q9BQ48 92 aaKnown RBP1.53□□□□□ -2.16
RGPD6-208ENST00000473101 STARD9Q9P2P6 4700 aa1.53□□□□□ -2.16
RGPD6-208ENST00000473101 DNAH11Q96DT5 4516 aa1.52□□□□□ -2.17
RGPD6-208ENST00000473101 NBDYA0A0U1RRE5 68 aa1.52□□□□□ -2.17
RGPD6-208ENST00000473101 K7EIL1 84 aa1.52□□□□□ -2.17
RGPD6-208ENST00000473101 PCOTHQ58A44 107 aa1.52□□□□□ -2.17
RGPD6-208ENST00000473101 Q96NJ1 140 aa1.52□□□□□ -2.17
RGPD6-208ENST00000473101 PLAC8Q9NZF1 115 aa1.52□□□□□ -2.17
RGPD6-208ENST00000473101 APLNQ9ULZ1 77 aa1.52□□□□□ -2.17
RGPD6-208ENST00000473101 DNAH5Q8TE73 4624 aa1.51□□□□□ -2.17
RGPD6-208ENST00000473101 A6NN06 94 aa1.51□□□□□ -2.17
RGPD6-208ENST00000473101 ACYP2P14621 99 aa1.51□□□□□ -2.17
RGPD6-208ENST00000473101 KRTAP13-4Q3LI77 160 aa1.51□□□□□ -2.17
RGPD6-208ENST00000473101 FBN3Q75N90 2809 aa1.51□□□□□ -2.17
RGPD6-208ENST00000473101 TGP01266 2768 aa1.51□□□□□ -2.17
RGPD6-208ENST00000473101 SSBP3-AS1Q7Z2R9 100 aa1.5□□□□□ -2.17
RGPD6-208ENST00000473101 SPTSSBQ8NFR3 76 aa1.5□□□□□ -2.17
RGPD6-208ENST00000473101 DMAC1Q96GE9 116 aa1.5□□□□□ -2.17
RGPD6-208ENST00000473101 A0A087WTM6 91 aa1.49□□□□□ -2.17
RGPD6-208ENST00000473101 KRTAP12-1P59990 96 aa1.49□□□□□ -2.17
RGPD6-208ENST00000473101 SPAG11AQ6PDA7 123 aa1.49□□□□□ -2.17
RGPD6-208ENST00000473101 KMT2AQ03164 3969 aa1.49□□□□□ -2.17
RGPD6-208ENST00000473101 VPS13BQ7Z7G8 4022 aa1.49□□□□□ -2.17
RGPD6-208ENST00000473101 PKD1P98161 4303 aa1.48□□□□□ -2.17
RGPD6-208ENST00000473101 KRTAP12-3P60328 96 aa1.48□□□□□ -2.17
RGPD6-208ENST00000473101 FAT2Q9NYQ8 4349 aa1.48□□□□□ -2.17
RGPD6-208ENST00000473101 A0A1B0GU69 56 aa1.47□□□□□ -2.17
RGPD6-208ENST00000473101 UQCR11O14957 56 aa1.47□□□□□ -2.17
RGPD6-208ENST00000473101 PKHD1L1Q86WI1 4243 aa1.47□□□□□ -2.17
RGPD6-208ENST00000473101 SPINK7P58062 85 aa1.46□□□□□ -2.18
RGPD6-208ENST00000473101 C1orf134Q5TEV5 83 aa1.46□□□□□ -2.18
RGPD6-208ENST00000473101 SPATA8Q6RVD6 105 aa1.46□□□□□ -2.18
RGPD6-208ENST00000473101 LRP1BQ9NZR2 4599 aa1.45□□□□□ -2.18
RGPD6-208ENST00000473101 RPS29P62273 56 aaKnown RBP1.45□□□□□ -2.18
RGPD6-208ENST00000473101 MIR22HGQ0VDD5 57 aa1.45□□□□□ -2.18
RGPD6-208ENST00000473101 SPINK6Q6UWN8 80 aa1.45□□□□□ -2.18
RGPD6-208ENST00000473101 SACSQ9NZJ4 4579 aa1.45□□□□□ -2.18
RGPD6-208ENST00000473101 PKHD1P08F94 4074 aa1.45□□□□□ -2.18
RGPD6-208ENST00000473101 SPINK1P00995 79 aa1.44□□□□□ -2.18
RGPD6-208ENST00000473101 Q6ZSA8 131 aa1.44□□□□□ -2.18
RGPD6-208ENST00000473101 RETNLBQ9BQ08 111 aa1.44□□□□□ -2.18
RGPD6-208ENST00000473101 APOBP04114 4563 aaKnown RBP1.44□□□□□ -2.18
RGPD6-208ENST00000473101 DNHD1Q96M86 4753 aa1.43□□□□□ -2.18
RGPD6-208ENST00000473101 LY6G6CO95867 125 aa1.42□□□□□ -2.18
RGPD6-208ENST00000473101 ROMO1P60602 79 aa1.42□□□□□ -2.18
RGPD6-208ENST00000473101 DYNC1H1Q14204 4646 aaKnown RBP1.42□□□□□ -2.18
RGPD6-208ENST00000473101 HYDINQ4G0P3 5121 aa1.41□□□□□ -2.18
RGPD6-208ENST00000473101 TNXBP22105 4242 aa1.4□□□□□ -2.19
RGPD6-208ENST00000473101 HSPG2P98160 4391 aa1.39□□□□□ -2.19
RGPD6-208ENST00000473101 KRTAP12-4P60329 112 aa1.39□□□□□ -2.19
RGPD6-208ENST00000473101 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
RGPD6-208ENST00000473101 H1FX-AS1Q4G0G2 97 aa1.37□□□□□ -2.19
RGPD6-208ENST00000473101 CSAG1Q6PB30 78 aa1.37□□□□□ -2.19
RGPD6-208ENST00000473101 COX6B2Q6YFQ2 88 aa1.37□□□□□ -2.19
RGPD6-208ENST00000473101 FAT1Q14517 4588 aa1.37□□□□□ -2.19
RGPD6-208ENST00000473101 FAT3Q8TDW7 4589 aa1.37□□□□□ -2.19
RGPD6-208ENST00000473101 RYR2Q92736 4967 aa1.36□□□□□ -2.19
RGPD6-208ENST00000473101 H0YAA0 97 aa1.36□□□□□ -2.19
RGPD6-208ENST00000473101 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
RGPD6-208ENST00000473101 RPL37P61927 97 aaKnown RBP1.33□□□□□ -2.2
RGPD6-208ENST00000473101 KRTAP21-3Q3LHN1 58 aa1.33□□□□□ -2.2
RGPD6-208ENST00000473101 FLG2Q5D862 2391 aaPredicted RBP1.32□□□□□ -2.2
RGPD6-208ENST00000473101 C9orf92A6NGG3 77 aa1.32□□□□□ -2.2
RGPD6-208ENST00000473101 RYR1P21817 5038 aa1.32□□□□□ -2.2
RGPD6-208ENST00000473101 KRTAP10-4P60372 401 aaPredicted RBP1.31□□□□□ -2.2
RGPD6-208ENST00000473101 S4R3F8 94 aa1.31□□□□□ -2.2
RGPD6-208ENST00000473101 DMBT1Q9UGM3 2413 aaPredicted RBP1.3□□□□□ -2.2
RGPD6-208ENST00000473101 INE1O15225 51 aa1.3□□□□□ -2.2
RGPD6-208ENST00000473101 MYCBP2O75592 4640 aa1.3□□□□□ -2.2
RGPD6-208ENST00000473101 KMT2CQ8NEZ4 4911 aaKnown RBP1.3□□□□□ -2.2
RGPD6-208ENST00000473101 CRIPTQ9P021 101 aa1.29□□□□□ -2.2
RGPD6-208ENST00000473101 RYR3Q15413 4870 aa1.28□□□□□ -2.2
RGPD6-208ENST00000473101 M0QZ58 72 aa1.28□□□□□ -2.2
RGPD6-208ENST00000473101 SMR3BP02814 79 aaPredicted RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms