RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 CRIPTQ9P021 101 aa3.19□□□□□ -1.9
NUP35-208ENST00000472844 CRCT1Q9UGL9 99 aa3.19□□□□□ -1.9
NUP35-208ENST00000472844 TNXBP22105 4242 aa3.19□□□□□ -1.9
NUP35-208ENST00000472844 H3BUX3 64 aa3.18□□□□□ -1.9
NUP35-208ENST00000472844 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
NUP35-208ENST00000472844 CDKN2A-AS1Q9UH64 79 aa3.17□□□□□ -1.9
NUP35-208ENST00000472844 PRB3Q04118 309 aaPredicted RBP3.16□□□□□ -1.9
NUP35-208ENST00000472844 Q5VSD8 79 aa3.15□□□□□ -1.91
NUP35-208ENST00000472844 Q8IZM0 81 aa3.15□□□□□ -1.91
NUP35-208ENST00000472844 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
NUP35-208ENST00000472844 LINC00308Q8TCZ7 52 aa3.13□□□□□ -1.91
NUP35-208ENST00000472844 USMG5Q96IX5 58 aa3.12□□□□□ -1.91
NUP35-208ENST00000472844 SMIM2Q9BVW6 85 aa3.11□□□□□ -1.91
NUP35-208ENST00000472844 H3BSH0 61 aa3.1□□□□□ -1.91
NUP35-208ENST00000472844 DEFB136Q30KP8 78 aa3.1□□□□□ -1.91
NUP35-208ENST00000472844 LELP1Q5T871 98 aa3.09□□□□□ -1.91
NUP35-208ENST00000472844 LPAP08519 4548 aa3.08□□□□□ -1.92
NUP35-208ENST00000472844 TP53AIP1Q9HCN2 124 aa3.08□□□□□ -1.92
NUP35-208ENST00000472844 K7EQZ3 153 aa3.07□□□□□ -1.92
NUP35-208ENST00000472844 COX6B2Q6YFQ2 88 aa3.07□□□□□ -1.92
NUP35-208ENST00000472844 MRPL34Q9BQ48 92 aaKnown RBP3.07□□□□□ -1.92
NUP35-208ENST00000472844 KRTAP10-1P60331 282 aa3.06□□□□□ -1.92
NUP35-208ENST00000472844 PIGYQ3MUY2 71 aa3.06□□□□□ -1.92
NUP35-208ENST00000472844 SMR3BP02814 79 aaPredicted RBP3.05□□□□□ -1.92
NUP35-208ENST00000472844 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
NUP35-208ENST00000472844 I3L2K1 104 aa3.04□□□□□ -1.92
NUP35-208ENST00000472844 NDUFA1O15239 70 aa3.03□□□□□ -1.92
NUP35-208ENST00000472844 DNAH8Q96JB1 4490 aa3.02□□□□□ -1.93
NUP35-208ENST00000472844 PCOTHQ58A44 107 aa3.02□□□□□ -1.93
NUP35-208ENST00000472844 APLNQ9ULZ1 77 aa3.02□□□□□ -1.93
NUP35-208ENST00000472844 CNFNQ9BYD5 112 aa3□□□□□ -1.93
NUP35-208ENST00000472844 MINOS1Q5TGZ0 78 aa2.99□□□□□ -1.93
NUP35-208ENST00000472844 IAPPP10997 89 aa2.96□□□□□ -1.94
NUP35-208ENST00000472844 DEFB104AQ8WTQ1 72 aa2.95□□□□□ -1.94
NUP35-208ENST00000472844 C6orf48Q9UBA6 75 aa2.95□□□□□ -1.94
NUP35-208ENST00000472844 KAAG1Q9UBP8 84 aa2.94□□□□□ -1.94
NUP35-208ENST00000472844 COX6A2Q02221 97 aa2.93□□□□□ -1.94
NUP35-208ENST00000472844 DEFB135Q30KP9 77 aa2.93□□□□□ -1.94
NUP35-208ENST00000472844 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
NUP35-208ENST00000472844 H0YAA0 97 aa2.92□□□□□ -1.94
NUP35-208ENST00000472844 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
NUP35-208ENST00000472844 KRTAP12-1P59990 96 aa2.89□□□□□ -1.95
NUP35-208ENST00000472844 DEFB4AO15263 64 aa2.88□□□□□ -1.95
NUP35-208ENST00000472844 MT1HL1P0DM35 61 aa2.88□□□□□ -1.95
NUP35-208ENST00000472844 RPS27LQ71UM5 84 aaKnown RBP2.87□□□□□ -1.95
NUP35-208ENST00000472844 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
NUP35-208ENST00000472844 PRO0255Q9UI72 69 aa2.86□□□□□ -1.95
NUP35-208ENST00000472844 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
NUP35-208ENST00000472844 ARHGAP5-AS1Q96IT6 56 aa2.85□□□□□ -1.95
NUP35-208ENST00000472844 SSPOA2VEC9 5147 aa2.84□□□□□ -1.95
NUP35-208ENST00000472844 KRTAP10-4P60372 401 aaPredicted RBP2.82□□□□□ -1.96
NUP35-208ENST00000472844 Q6ZSA8 131 aa2.82□□□□□ -1.96
NUP35-208ENST00000472844 USH2AO75445 5202 aa2.82□□□□□ -1.96
NUP35-208ENST00000472844 KRTAP13-3Q3SY46 172 aa2.81□□□□□ -1.96
NUP35-208ENST00000472844 WFDC13Q8IUB5 93 aa2.81□□□□□ -1.96
NUP35-208ENST00000472844 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
NUP35-208ENST00000472844 FCGBPQ9Y6R7 5405 aaPredicted RBP2.8□□□□□ -1.96
NUP35-208ENST00000472844 RPS27P42677 84 aaKnown RBP2.79□□□□□ -1.96
NUP35-208ENST00000472844 H1FX-AS1Q4G0G2 97 aa2.79□□□□□ -1.96
NUP35-208ENST00000472844 WFDC10BQ8IUB3 73 aa2.78□□□□□ -1.96
NUP35-208ENST00000472844 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.97
NUP35-208ENST00000472844 SPRR1AP35321 89 aa2.77□□□□□ -1.97
NUP35-208ENST00000472844 SPINK9Q5DT21 86 aa2.77□□□□□ -1.97
NUP35-208ENST00000472844 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
NUP35-208ENST00000472844 NEBP20929 6669 aa2.77□□□□□ -1.97
NUP35-208ENST00000472844 DEFB130BP0DP73 79 aa2.76□□□□□ -1.97
NUP35-208ENST00000472844 DEFB130AP0DP74 79 aa2.76□□□□□ -1.97
NUP35-208ENST00000472844 POLR2KP53803 58 aaKnown RBP2.76□□□□□ -1.97
NUP35-208ENST00000472844 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
NUP35-208ENST00000472844 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
NUP35-208ENST00000472844 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
NUP35-208ENST00000472844 DEFB105AQ8NG35 78 aa2.74□□□□□ -1.97
NUP35-208ENST00000472844 IGLV5-48A0A075B6I7 105 aa2.73□□□□□ -1.97
NUP35-208ENST00000472844 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
NUP35-208ENST00000472844 TTTY10Q9BZA0 68 aa2.73□□□□□ -1.97
NUP35-208ENST00000472844 HTN3P15516 51 aa2.72□□□□□ -1.97
NUP35-208ENST00000472844 KRTAP10-5P60370 271 aa2.72□□□□□ -1.97
NUP35-208ENST00000472844 LEAP2Q969E1 77 aa2.72□□□□□ -1.97
NUP35-208ENST00000472844 RPL39P62891 51 aaKnown RBP2.7□□□□□ -1.98
NUP35-208ENST00000472844 KRTAP13-1Q8IUC0 172 aa2.69□□□□□ -1.98
NUP35-208ENST00000472844 KRTAP20-1Q3LI63 56 aa2.68□□□□□ -1.98
NUP35-208ENST00000472844 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
NUP35-208ENST00000472844 SPRR1BP22528 89 aa2.67□□□□□ -1.98
NUP35-208ENST00000472844 DEFB131AP59861 70 aa2.67□□□□□ -1.98
NUP35-208ENST00000472844 WT1-ASQ06250 92 aa2.67□□□□□ -1.98
NUP35-208ENST00000472844 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
NUP35-208ENST00000472844 LINC01590Q5TEZ4 76 aa2.67□□□□□ -1.98
NUP35-208ENST00000472844 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.98
NUP35-208ENST00000472844 H3BUA1 57 aa2.65□□□□□ -1.99
NUP35-208ENST00000472844 RPL39LQ96EH5 51 aaKnown RBP2.65□□□□□ -1.99
NUP35-208ENST00000472844 SPART-AS1P0CW21 52 aa2.64□□□□□ -1.99
NUP35-208ENST00000472844 KMT2DO14686 5537 aa2.63□□□□□ -1.99
NUP35-208ENST00000472844 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
NUP35-208ENST00000472844 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
NUP35-208ENST00000472844 APELAP0DMC3 54 aa2.61□□□□□ -1.99
NUP35-208ENST00000472844 MMP24-AS1A0A0U1RRL7 71 aa2.6□□□□□ -1.99
NUP35-208ENST00000472844 KLK9Q2XQG4 91 aa2.58□□□□□ -2
NUP35-208ENST00000472844 A0A0D9SG42 100 aa2.56□□□□□ -2
NUP35-208ENST00000472844 PRLHP81277 87 aa2.55□□□□□ -2
NUP35-208ENST00000472844 MDN1Q9NU22 5596 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms