RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 NREPQ16612 68 aa3.93□□□□□ -1.78
XRN1-208ENST00000470537 HSD52Q0P140 79 aa3.91□□□□□ -1.78
XRN1-208ENST00000470537 C4orf26Q17RF5 130 aa3.91□□□□□ -1.78
XRN1-208ENST00000470537 LOC110117498A0A087WWA1 95 aa3.9□□□□□ -1.79
XRN1-208ENST00000470537 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
XRN1-208ENST00000470537 S4R3F8 94 aa3.9□□□□□ -1.79
XRN1-208ENST00000470537 KLKP1Q107X0 134 aa3.89□□□□□ -1.79
XRN1-208ENST00000470537 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
XRN1-208ENST00000470537 CRIPTQ9P021 101 aa3.89□□□□□ -1.79
XRN1-208ENST00000470537 K7ERJ3 54 aa3.88□□□□□ -1.79
XRN1-208ENST00000470537 SPRR2EP22531 72 aa3.88□□□□□ -1.79
XRN1-208ENST00000470537 SPRR2BP35325 72 aa3.88□□□□□ -1.79
XRN1-208ENST00000470537 SPRR2AP35326 72 aa3.88□□□□□ -1.79
XRN1-208ENST00000470537 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
XRN1-208ENST00000470537 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
XRN1-208ENST00000470537 ATXN8Q156A1 80 aa3.86□□□□□ -1.79
XRN1-208ENST00000470537 Q5W150 140 aa3.86□□□□□ -1.79
XRN1-208ENST00000470537 K7EQZ3 153 aa3.85□□□□□ -1.79
XRN1-208ENST00000470537 CXCL6P80162 114 aa3.85□□□□□ -1.79
XRN1-208ENST00000470537 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
XRN1-208ENST00000470537 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
XRN1-208ENST00000470537 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
XRN1-208ENST00000470537 BPY2O14599 106 aa3.83□□□□□ -1.8
XRN1-208ENST00000470537 LCA10Q71F78 164 aa3.83□□□□□ -1.8
XRN1-208ENST00000470537 C1orf64Q8NEQ6 169 aa3.83□□□□□ -1.8
XRN1-208ENST00000470537 HCG22E2RYF7 251 aa3.82□□□□□ -1.8
XRN1-208ENST00000470537 CASC2Q6XLA1 102 aa3.82□□□□□ -1.8
XRN1-208ENST00000470537 C14orf132Q9NPU4 83 aa3.82□□□□□ -1.8
XRN1-208ENST00000470537 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
XRN1-208ENST00000470537 UQCR10Q9UDW1 63 aa3.78□□□□□ -1.8
XRN1-208ENST00000470537 SPRR2DP22532 72 aa3.76□□□□□ -1.81
XRN1-208ENST00000470537 PLAC4Q8WY50 150 aa3.74□□□□□ -1.81
XRN1-208ENST00000470537 PCP4L1A6NKN8 68 aa3.73□□□□□ -1.81
XRN1-208ENST00000470537 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
XRN1-208ENST00000470537 TP53AIP1Q9HCN2 124 aa3.72□□□□□ -1.81
XRN1-208ENST00000470537 M0R143 59 aa3.71□□□□□ -1.82
XRN1-208ENST00000470537 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
XRN1-208ENST00000470537 A8MUN3 132 aa3.7□□□□□ -1.82
XRN1-208ENST00000470537 H0YAA0 97 aa3.7□□□□□ -1.82
XRN1-208ENST00000470537 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
XRN1-208ENST00000470537 SEC61GP60059 68 aa3.7□□□□□ -1.82
XRN1-208ENST00000470537 Q8N9L7 120 aa3.7□□□□□ -1.82
XRN1-208ENST00000470537 TSTD3H0UI37 97 aa3.69□□□□□ -1.82
XRN1-208ENST00000470537 NDUFC1O43677 76 aa3.69□□□□□ -1.82
XRN1-208ENST00000470537 PYY3Q5JQD4 70 aa3.69□□□□□ -1.82
XRN1-208ENST00000470537 NAA38Q9BRA0 125 aaKnown RBP3.68□□□□□ -1.82
XRN1-208ENST00000470537 H3BT86 120 aa3.67□□□□□ -1.82
XRN1-208ENST00000470537 MT1XP80297 61 aa3.67□□□□□ -1.82
XRN1-208ENST00000470537 UBL5Q9BZL1 73 aa3.65□□□□□ -1.83
XRN1-208ENST00000470537 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
XRN1-208ENST00000470537 CYP4F30PQ9H0H9 118 aa3.63□□□□□ -1.83
XRN1-208ENST00000470537 ADM2Q7Z4H4 148 aa3.62□□□□□ -1.83
XRN1-208ENST00000470537 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
XRN1-208ENST00000470537 R4GN34 69 aa3.61□□□□□ -1.83
XRN1-208ENST00000470537 C20orf197Q8N268 126 aa3.6□□□□□ -1.83
XRN1-208ENST00000470537 LOC101927531A0A1B0GV80 90 aa3.59□□□□□ -1.83
XRN1-208ENST00000470537 ACYP1P07311 99 aa3.59□□□□□ -1.83
XRN1-208ENST00000470537 A0A087WVE0 104 aa3.58□□□□□ -1.84
XRN1-208ENST00000470537 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
XRN1-208ENST00000470537 TRAV22A0A0B4J277 110 aa3.57□□□□□ -1.84
XRN1-208ENST00000470537 LOC105371267A0A1B0GV96 52 aa3.57□□□□□ -1.84
XRN1-208ENST00000470537 A0A1W2PPM0 123 aa3.52□□□□□ -1.85
XRN1-208ENST00000470537 M0QZ58 72 aa3.52□□□□□ -1.85
XRN1-208ENST00000470537 ATOX1O00244 68 aa3.52□□□□□ -1.85
XRN1-208ENST00000470537 BATFQ16520 125 aa3.51□□□□□ -1.85
XRN1-208ENST00000470537 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
XRN1-208ENST00000470537 K7EP34 96 aa3.5□□□□□ -1.85
XRN1-208ENST00000470537 LINC01554Q52M75 96 aa3.49□□□□□ -1.85
XRN1-208ENST00000470537 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
XRN1-208ENST00000470537 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
XRN1-208ENST00000470537 SPCS1Q9Y6A9 102 aa3.47□□□□□ -1.85
XRN1-208ENST00000470537 TAX1BP3O14907 124 aa3.46□□□□□ -1.86
XRN1-208ENST00000470537 UQCRQO14949 82 aa3.46□□□□□ -1.86
XRN1-208ENST00000470537 H0Y9P7 68 aa3.44□□□□□ -1.86
XRN1-208ENST00000470537 P0C880 135 aa3.44□□□□□ -1.86
XRN1-208ENST00000470537 MT-ATP8P03928 68 aa3.41□□□□□ -1.86
XRN1-208ENST00000470537 SMIM6P0DI80 62 aa3.39□□□□□ -1.87
XRN1-208ENST00000470537 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
XRN1-208ENST00000470537 MP68P56378 58 aa3.37□□□□□ -1.87
XRN1-208ENST00000470537 LINC00208Q96KT6 92 aa3.37□□□□□ -1.87
XRN1-208ENST00000470537 HIST1H4AP62805 103 aaKnown RBP3.35□□□□□ -1.87
XRN1-208ENST00000470537 ATP5EP2Q5VTU8 51 aa3.35□□□□□ -1.87
XRN1-208ENST00000470537 PRO0461Q9UI25 63 aa3.35□□□□□ -1.87
XRN1-208ENST00000470537 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
XRN1-208ENST00000470537 F8W1H4 67 aa3.32□□□□□ -1.88
XRN1-208ENST00000470537 GTF2H5Q6ZYL4 71 aa3.31□□□□□ -1.88
XRN1-208ENST00000470537 CYSTM1Q9H1C7 97 aa3.31□□□□□ -1.88
XRN1-208ENST00000470537 COL5A1-AS1Q5SY13 56 aa3.3□□□□□ -1.88
XRN1-208ENST00000470537 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
XRN1-208ENST00000470537 SPTSSBQ8NFR3 76 aa3.3□□□□□ -1.88
XRN1-208ENST00000470537 MT4P47944 62 aa3.29□□□□□ -1.88
XRN1-208ENST00000470537 ETDBQ3ZM63 59 aa3.29□□□□□ -1.88
XRN1-208ENST00000470537 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
XRN1-208ENST00000470537 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
XRN1-208ENST00000470537 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
XRN1-208ENST00000470537 TRAV7A0A075B6U4 112 aa3.27□□□□□ -1.89
XRN1-208ENST00000470537 H3BPC8 53 aa3.27□□□□□ -1.89
XRN1-208ENST00000470537 MT1EP04732 61 aa3.27□□□□□ -1.89
XRN1-208ENST00000470537 MT1GP13640 62 aa3.27□□□□□ -1.89
XRN1-208ENST00000470537 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms