RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 A8MUU9 505 aa2.9□□□□□ -1.95
UBE3C-204ENST00000469336 K7EIL1 84 aa2.9□□□□□ -1.95
UBE3C-204ENST00000469336 KRTAP25-1Q3LHN0 102 aa2.9□□□□□ -1.95
UBE3C-204ENST00000469336 NUPR2A6NF83 97 aa2.89□□□□□ -1.95
UBE3C-204ENST00000469336 PKD1L1Q8TDX9 2849 aa2.89□□□□□ -1.95
UBE3C-204ENST00000469336 ANK2Q01484 3957 aa2.88□□□□□ -1.95
UBE3C-204ENST00000469336 K7ERS5 55 aa2.88□□□□□ -1.95
UBE3C-204ENST00000469336 SPINK6Q6UWN8 80 aa2.88□□□□□ -1.95
UBE3C-204ENST00000469336 TRRAPQ9Y4A5 3859 aa2.87□□□□□ -1.95
UBE3C-204ENST00000469336 A0A087WTM6 91 aa2.87□□□□□ -1.95
UBE3C-204ENST00000469336 ROMO1P60602 79 aa2.87□□□□□ -1.95
UBE3C-204ENST00000469336 RPS29P62273 56 aaKnown RBP2.86□□□□□ -1.95
UBE3C-204ENST00000469336 OTOGQ6ZRI0 2925 aa2.86□□□□□ -1.95
UBE3C-204ENST00000469336 SRRM2Q9UQ35 2752 aaKnown RBP2.85□□□□□ -1.95
UBE3C-204ENST00000469336 C1orf134Q5TEV5 83 aa2.85□□□□□ -1.95
UBE3C-204ENST00000469336 HUWE1Q7Z6Z7 4374 aaKnown RBP2.85□□□□□ -1.95
UBE3C-204ENST00000469336 CMYA5Q8N3K9 4069 aa2.85□□□□□ -1.95
UBE3C-204ENST00000469336 LYSTQ99698 3801 aa2.84□□□□□ -1.95
UBE3C-204ENST00000469336 NBEAL1Q6ZS30 2694 aa2.84□□□□□ -1.96
UBE3C-204ENST00000469336 DNAH10Q8IVF4 4471 aa2.83□□□□□ -1.96
UBE3C-204ENST00000469336 A0A1B0GU33 70 aa2.83□□□□□ -1.96
UBE3C-204ENST00000469336 H0YAA0 97 aa2.82□□□□□ -1.96
UBE3C-204ENST00000469336 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
UBE3C-204ENST00000469336 SPINK1P00995 79 aa2.82□□□□□ -1.96
UBE3C-204ENST00000469336 COX6B2Q6YFQ2 88 aa2.82□□□□□ -1.96
UBE3C-204ENST00000469336 Q6ZSA8 131 aa2.82□□□□□ -1.96
UBE3C-204ENST00000469336 LINC00304Q8N9R0 145 aa2.82□□□□□ -1.96
UBE3C-204ENST00000469336 STAB2Q8WWQ8 2551 aa2.81□□□□□ -1.96
UBE3C-204ENST00000469336 H1FX-AS1Q4G0G2 97 aa2.81□□□□□ -1.96
UBE3C-204ENST00000469336 DNAH8Q96JB1 4490 aa2.81□□□□□ -1.96
UBE3C-204ENST00000469336 DNAH17Q9UFH2 4485 aa2.8□□□□□ -1.96
UBE3C-204ENST00000469336 DNAH9Q9NYC9 4486 aa2.8□□□□□ -1.96
UBE3C-204ENST00000469336 HECTD4Q9Y4D8 3996 aa2.8□□□□□ -1.96
UBE3C-204ENST00000469336 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
UBE3C-204ENST00000469336 NOTCH1P46531 2555 aa2.8□□□□□ -1.96
UBE3C-204ENST00000469336 VPS13DQ5THJ4 4388 aa2.78□□□□□ -1.96
UBE3C-204ENST00000469336 DNHD1Q96M86 4753 aa2.77□□□□□ -1.97
UBE3C-204ENST00000469336 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
UBE3C-204ENST00000469336 C20orf166-AS1Q96NR2 134 aa2.77□□□□□ -1.97
UBE3C-204ENST00000469336 PLECQ15149 4684 aaKnown RBP2.77□□□□□ -1.97
UBE3C-204ENST00000469336 STAB1Q9NY15 2570 aa2.77□□□□□ -1.97
UBE3C-204ENST00000469336 COL6A5A8TX70 2615 aa2.75□□□□□ -1.97
UBE3C-204ENST00000469336 DNAH7Q8WXX0 4024 aa2.75□□□□□ -1.97
UBE3C-204ENST00000469336 PRKDCP78527 4128 aaKnown RBP2.74□□□□□ -1.97
UBE3C-204ENST00000469336 RPL37P61927 97 aaKnown RBP2.74□□□□□ -1.97
UBE3C-204ENST00000469336 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
UBE3C-204ENST00000469336 DNAH6Q9C0G6 4158 aa2.73□□□□□ -1.97
UBE3C-204ENST00000469336 DNAH2Q9P225 4427 aa2.72□□□□□ -1.97
UBE3C-204ENST00000469336 FBN1P35555 2871 aaKnown RBP2.71□□□□□ -1.97
UBE3C-204ENST00000469336 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
UBE3C-204ENST00000469336 MGAM2Q2M2H8 2515 aa2.71□□□□□ -1.98
UBE3C-204ENST00000469336 FRAS1Q86XX4 4008 aa2.7□□□□□ -1.98
UBE3C-204ENST00000469336 TGP01266 2768 aa2.69□□□□□ -1.98
UBE3C-204ENST00000469336 P0C880 135 aa2.69□□□□□ -1.98
UBE3C-204ENST00000469336 DNAH11Q96DT5 4516 aa2.69□□□□□ -1.98
UBE3C-204ENST00000469336 MEGF8Q7Z7M0 2845 aa2.69□□□□□ -1.98
UBE3C-204ENST00000469336 COL7A1Q02388 2944 aa2.69□□□□□ -1.98
UBE3C-204ENST00000469336 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
UBE3C-204ENST00000469336 CSMD3Q7Z407 3707 aa2.67□□□□□ -1.98
UBE3C-204ENST00000469336 DNAH5Q8TE73 4624 aa2.67□□□□□ -1.98
UBE3C-204ENST00000469336 SACSQ9NZJ4 4579 aa2.66□□□□□ -1.98
UBE3C-204ENST00000469336 STARD9Q9P2P6 4700 aa2.66□□□□□ -1.98
UBE3C-204ENST00000469336 TPRXLQ17RH7 258 aa2.62□□□□□ -1.99
UBE3C-204ENST00000469336 LRP1BQ9NZR2 4599 aa2.61□□□□□ -1.99
UBE3C-204ENST00000469336 M0QZ58 72 aa2.6□□□□□ -1.99
UBE3C-204ENST00000469336 S4R3F8 94 aa2.6□□□□□ -1.99
UBE3C-204ENST00000469336 PKHD1L1Q86WI1 4243 aa2.59□□□□□ -2
UBE3C-204ENST00000469336 VPS13BQ7Z7G8 4022 aa2.58□□□□□ -2
UBE3C-204ENST00000469336 KMT2AQ03164 3969 aa2.58□□□□□ -2
UBE3C-204ENST00000469336 FLG2Q5D862 2391 aaPredicted RBP2.57□□□□□ -2
UBE3C-204ENST00000469336 KRTAP13-4Q3LI77 160 aa2.57□□□□□ -2
UBE3C-204ENST00000469336 C9orf92A6NGG3 77 aa2.56□□□□□ -2
UBE3C-204ENST00000469336 R4GN34 69 aa2.55□□□□□ -2
UBE3C-204ENST00000469336 PKD1P98161 4303 aa2.54□□□□□ -2
UBE3C-204ENST00000469336 A0A0D9SG42 100 aa2.54□□□□□ -2
UBE3C-204ENST00000469336 KRTAP12-1P59990 96 aa2.54□□□□□ -2
UBE3C-204ENST00000469336 APOBP04114 4563 aaKnown RBP2.54□□□□□ -2
UBE3C-204ENST00000469336 FAT2Q9NYQ8 4349 aa2.52□□□□□ -2.01
UBE3C-204ENST00000469336 C10orf95Q9H7T3 257 aa2.52□□□□□ -2.01
UBE3C-204ENST00000469336 PKHD1P08F94 4074 aa2.51□□□□□ -2.01
UBE3C-204ENST00000469336 KRTAP10-4P60372 401 aaPredicted RBP2.5□□□□□ -2.01
UBE3C-204ENST00000469336 DMBT1Q9UGM3 2413 aaPredicted RBP2.49□□□□□ -2.01
UBE3C-204ENST00000469336 DYNC1H1Q14204 4646 aaKnown RBP2.47□□□□□ -2.01
UBE3C-204ENST00000469336 PLAC4Q8WY50 150 aa2.47□□□□□ -2.01
UBE3C-204ENST00000469336 LRP1Q07954 4544 aaKnown RBP2.46□□□□□ -2.02
UBE3C-204ENST00000469336 TNXBP22105 4242 aa2.46□□□□□ -2.02
UBE3C-204ENST00000469336 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
UBE3C-204ENST00000469336 FAT3Q8TDW7 4589 aa2.46□□□□□ -2.02
UBE3C-204ENST00000469336 FAT1Q14517 4588 aa2.45□□□□□ -2.02
UBE3C-204ENST00000469336 HSPG2P98160 4391 aa2.43□□□□□ -2.02
UBE3C-204ENST00000469336 KMT2CQ8NEZ4 4911 aaKnown RBP2.43□□□□□ -2.02
UBE3C-204ENST00000469336 RYR3Q15413 4870 aa2.42□□□□□ -2.02
UBE3C-204ENST00000469336 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
UBE3C-204ENST00000469336 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
UBE3C-204ENST00000469336 SMR3BP02814 79 aaPredicted RBP2.39□□□□□ -2.03
UBE3C-204ENST00000469336 HYDINQ4G0P3 5121 aa2.36□□□□□ -2.03
UBE3C-204ENST00000469336 RYR1P21817 5038 aa2.35□□□□□ -2.03
UBE3C-204ENST00000469336 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
UBE3C-204ENST00000469336 EPPK1P58107 5090 aaKnown RBP2.35□□□□□ -2.03
UBE3C-204ENST00000469336 MYCBP2O75592 4640 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms