RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 DEFB105AQ8NG35 78 aa1.72□□□□□ -2.13
HMGB1P25-201ENST00000468402 LOC110117498A0A087WWA1 95 aa1.71□□□□□ -2.14
HMGB1P25-201ENST00000468402 A0A096LNI7 61 aa1.71□□□□□ -2.14
HMGB1P25-201ENST00000468402 F8WEM9 126 aa1.71□□□□□ -2.14
HMGB1P25-201ENST00000468402 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P25-201ENST00000468402 DNAH5Q8TE73 4624 aa1.71□□□□□ -2.14
HMGB1P25-201ENST00000468402 STAB2Q8WWQ8 2551 aa1.71□□□□□ -2.14
HMGB1P25-201ENST00000468402 SACSQ9NZJ4 4579 aa1.71□□□□□ -2.14
HMGB1P25-201ENST00000468402 IGKV3D-7A0A0C4DH55 119 aa1.7□□□□□ -2.14
HMGB1P25-201ENST00000468402 NBDYA0A0U1RRE5 68 aa1.7□□□□□ -2.14
HMGB1P25-201ENST00000468402 COX17Q14061 63 aa1.7□□□□□ -2.14
HMGB1P25-201ENST00000468402 ATXN8Q156A1 80 aa1.7□□□□□ -2.14
HMGB1P25-201ENST00000468402 LINC00208Q96KT6 92 aa1.7□□□□□ -2.14
HMGB1P25-201ENST00000468402 LINC01600Q96MT4 127 aa1.7□□□□□ -2.14
HMGB1P25-201ENST00000468402 LINC01558Q9Y6Z2 57 aa1.7□□□□□ -2.14
HMGB1P25-201ENST00000468402 SRRM2Q9UQ35 2752 aaKnown RBP1.69□□□□□ -2.14
HMGB1P25-201ENST00000468402 TRBV30A0A0K0K1B3 111 aa1.69□□□□□ -2.14
HMGB1P25-201ENST00000468402 H3BNG1 76 aa1.69□□□□□ -2.14
HMGB1P25-201ENST00000468402 PRLHP81277 87 aa1.69□□□□□ -2.14
HMGB1P25-201ENST00000468402 PRR15LQ9BU68 103 aa1.69□□□□□ -2.14
HMGB1P25-201ENST00000468402 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
HMGB1P25-201ENST00000468402 FAT2Q9NYQ8 4349 aa1.68□□□□□ -2.14
HMGB1P25-201ENST00000468402 GVQW2A0A096LPI5 108 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P25-201ENST00000468402 COX7BP24311 80 aa1.68□□□□□ -2.14
HMGB1P25-201ENST00000468402 Q6ZRN7 208 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P25-201ENST00000468402 CYSTM1Q9H1C7 97 aa1.68□□□□□ -2.14
HMGB1P25-201ENST00000468402 PKHD1L1Q86WI1 4243 aa1.68□□□□□ -2.14
HMGB1P25-201ENST00000468402 RYR2Q92736 4967 aa1.67□□□□□ -2.14
HMGB1P25-201ENST00000468402 ETDCA0A1B0GVM5 59 aa1.67□□□□□ -2.14
HMGB1P25-201ENST00000468402 ACYP2P14621 99 aa1.67□□□□□ -2.14
HMGB1P25-201ENST00000468402 ZCCHC13Q8WW36 166 aaKnown RBP1.67□□□□□ -2.14
HMGB1P25-201ENST00000468402 A0A087WTM6 91 aa1.66□□□□□ -2.14
HMGB1P25-201ENST00000468402 SMR3BP02814 79 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P25-201ENST00000468402 LINC00575Q6W349 94 aa1.66□□□□□ -2.14
HMGB1P25-201ENST00000468402 HERC2O95714 4834 aa1.66□□□□□ -2.14
HMGB1P25-201ENST00000468402 LINC00846Q9NV44 126 aa1.65□□□□□ -2.15
HMGB1P25-201ENST00000468402 DYNC1H1Q14204 4646 aaKnown RBP1.65□□□□□ -2.15
HMGB1P25-201ENST00000468402 RYR1P21817 5038 aa1.64□□□□□ -2.15
HMGB1P25-201ENST00000468402 PKHD1P08F94 4074 aa1.64□□□□□ -2.15
HMGB1P25-201ENST00000468402 A0A087WVE0 104 aa1.64□□□□□ -2.15
HMGB1P25-201ENST00000468402 VPS13BQ7Z7G8 4022 aa1.63□□□□□ -2.15
HMGB1P25-201ENST00000468402 H0YGX0 51 aa1.63□□□□□ -2.15
HMGB1P25-201ENST00000468402 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
HMGB1P25-201ENST00000468402 ATP5EP2Q5VTU8 51 aa1.63□□□□□ -2.15
HMGB1P25-201ENST00000468402 OBSCN-AS1Q96MR7 158 aa1.63□□□□□ -2.15
HMGB1P25-201ENST00000468402 KRTAP12-1P59990 96 aa1.62□□□□□ -2.15
HMGB1P25-201ENST00000468402 PCOTHQ58A44 107 aa1.62□□□□□ -2.15
HMGB1P25-201ENST00000468402 Q6JHZ5 121 aa1.62□□□□□ -2.15
HMGB1P25-201ENST00000468402 Q6ZRX8 168 aa1.62□□□□□ -2.15
HMGB1P25-201ENST00000468402 KCNQ1DNQ9H478 68 aa1.62□□□□□ -2.15
HMGB1P25-201ENST00000468402 APOBP04114 4563 aaKnown RBP1.62□□□□□ -2.15
HMGB1P25-201ENST00000468402 LRP1BQ9NZR2 4599 aa1.61□□□□□ -2.15
HMGB1P25-201ENST00000468402 NDUFB1O75438 58 aa1.61□□□□□ -2.15
HMGB1P25-201ENST00000468402 Q96NJ1 140 aa1.61□□□□□ -2.15
HMGB1P25-201ENST00000468402 H0Y9P7 68 aa1.6□□□□□ -2.15
HMGB1P25-201ENST00000468402 SPINK6Q6UWN8 80 aa1.6□□□□□ -2.15
HMGB1P25-201ENST00000468402 PLAC4Q8WY50 150 aa1.6□□□□□ -2.15
HMGB1P25-201ENST00000468402 LCE6AA0A183 80 aa1.59□□□□□ -2.15
HMGB1P25-201ENST00000468402 SPRR1AP35321 89 aa1.59□□□□□ -2.15
HMGB1P25-201ENST00000468402 WFDC13Q8IUB5 93 aa1.59□□□□□ -2.15
HMGB1P25-201ENST00000468402 KRTAP13-1Q8IUC0 172 aa1.59□□□□□ -2.15
HMGB1P25-201ENST00000468402 UBR4Q5T4S7 5183 aa1.59□□□□□ -2.16
HMGB1P25-201ENST00000468402 FAT1Q14517 4588 aa1.58□□□□□ -2.16
HMGB1P25-201ENST00000468402 KRTAP6-3Q3LI67 103 aa1.58□□□□□ -2.16
HMGB1P25-201ENST00000468402 SPRR4Q96PI1 79 aa1.58□□□□□ -2.16
HMGB1P25-201ENST00000468402 HSPG2P98160 4391 aa1.58□□□□□ -2.16
HMGB1P25-201ENST00000468402 ABCA13Q86UQ4 5058 aa1.58□□□□□ -2.16
HMGB1P25-201ENST00000468402 TRBV7-4A0A0J9YYF1 115 aa1.57□□□□□ -2.16
HMGB1P25-201ENST00000468402 NREPQ16612 68 aa1.57□□□□□ -2.16
HMGB1P25-201ENST00000468402 UBL5Q9BZL1 73 aa1.57□□□□□ -2.16
HMGB1P25-201ENST00000468402 PLAC8Q9NZF1 115 aa1.57□□□□□ -2.16
HMGB1P25-201ENST00000468402 K7EQZ3 153 aa1.56□□□□□ -2.16
HMGB1P25-201ENST00000468402 KRTAP12-3P60328 96 aa1.56□□□□□ -2.16
HMGB1P25-201ENST00000468402 SPATA8Q6RVD6 105 aa1.56□□□□□ -2.16
HMGB1P25-201ENST00000468402 FAT3Q8TDW7 4589 aa1.56□□□□□ -2.16
HMGB1P25-201ENST00000468402 KIAA1109Q2LD37 5005 aa1.55□□□□□ -2.16
HMGB1P25-201ENST00000468402 IGLV5-48A0A075B6I7 105 aa1.55□□□□□ -2.16
HMGB1P25-201ENST00000468402 C9orf92A6NGG3 77 aa1.55□□□□□ -2.16
HMGB1P25-201ENST00000468402 LRP1Q07954 4544 aaKnown RBP1.54□□□□□ -2.16
HMGB1P25-201ENST00000468402 TNXBP22105 4242 aa1.54□□□□□ -2.16
HMGB1P25-201ENST00000468402 FLG2Q5D862 2391 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P25-201ENST00000468402 HERC1Q15751 4861 aa1.54□□□□□ -2.16
HMGB1P25-201ENST00000468402 A0A1B0GU69 56 aa1.53□□□□□ -2.16
HMGB1P25-201ENST00000468402 Q5VSD8 79 aa1.53□□□□□ -2.16
HMGB1P25-201ENST00000468402 Q6ZSA8 131 aa1.53□□□□□ -2.16
HMGB1P25-201ENST00000468402 SPRR1BP22528 89 aa1.52□□□□□ -2.17
HMGB1P25-201ENST00000468402 SSBP3-AS1Q7Z2R9 100 aa1.52□□□□□ -2.17
HMGB1P25-201ENST00000468402 LINC00472Q9H8W2 130 aa1.52□□□□□ -2.17
HMGB1P25-201ENST00000468402 MMP24-AS1A0A0U1RRL7 71 aa1.51□□□□□ -2.17
HMGB1P25-201ENST00000468402 SPINK7P58062 85 aa1.51□□□□□ -2.17
HMGB1P25-201ENST00000468402 KRTAP10-4P60372 401 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P25-201ENST00000468402 LPAP08519 4548 aa1.5□□□□□ -2.17
HMGB1P25-201ENST00000468402 RPL37P61927 97 aaKnown RBP1.49□□□□□ -2.17
HMGB1P25-201ENST00000468402 MYCBP2O75592 4640 aa1.47□□□□□ -2.17
HMGB1P25-201ENST00000468402 HMCN2Q8NDA2 5059 aa1.47□□□□□ -2.17
HMGB1P25-201ENST00000468402 DMBT1Q9UGM3 2413 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P25-201ENST00000468402 MRPL34Q9BQ48 92 aaKnown RBP1.46□□□□□ -2.18
HMGB1P25-201ENST00000468402 SPINK1P00995 79 aa1.44□□□□□ -2.18
HMGB1P25-201ENST00000468402 MT1HL1P0DM35 61 aa1.44□□□□□ -2.18
HMGB1P25-201ENST00000468402 CRIPTQ9P021 101 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms