RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 A0A087WVE0 104 aa7.76□□□□□ -1.17
LINC00888-201ENST00000468380 UQCR10Q9UDW1 63 aa7.76□□□□□ -1.17
LINC00888-201ENST00000468380 GPR98Q8WXG9 6306 aa7.73□□□□□ -1.17
LINC00888-201ENST00000468380 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
LINC00888-201ENST00000468380 A8MUN3 132 aa7.6□□□□□ -1.19
LINC00888-201ENST00000468380 PLAC4Q8WY50 150 aa7.6□□□□□ -1.19
LINC00888-201ENST00000468380 H0YAA0 97 aa7.59□□□□□ -1.19
LINC00888-201ENST00000468380 H3BS24 57 aa7.59□□□□□ -1.19
LINC00888-201ENST00000468380 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
LINC00888-201ENST00000468380 CYP4F30PQ9H0H9 118 aa7.53□□□□□ -1.2
LINC00888-201ENST00000468380 H3BT86 120 aa7.5□□□□□ -1.21
LINC00888-201ENST00000468380 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
LINC00888-201ENST00000468380 DSTQ03001 7570 aaKnown RBP7.5□□□□□ -1.21
LINC00888-201ENST00000468380 M0R143 59 aa7.48□□□□□ -1.21
LINC00888-201ENST00000468380 TP53AIP1Q9HCN2 124 aa7.48□□□□□ -1.21
LINC00888-201ENST00000468380 NDUFC1O43677 76 aa7.47□□□□□ -1.21
LINC00888-201ENST00000468380 TSTD3H0UI37 97 aa7.46□□□□□ -1.22
LINC00888-201ENST00000468380 KRTAP4-9Q9BYQ8 210 aa7.45□□□□□ -1.22
LINC00888-201ENST00000468380 K7EP34 96 aa7.43□□□□□ -1.22
LINC00888-201ENST00000468380 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
LINC00888-201ENST00000468380 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
LINC00888-201ENST00000468380 R4GN34 69 aa7.34□□□□□ -1.23
LINC00888-201ENST00000468380 P0C880 135 aa7.31□□□□□ -1.24
LINC00888-201ENST00000468380 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
LINC00888-201ENST00000468380 C9orf118A6NHY6 69 aa7.28□□□□□ -1.24
LINC00888-201ENST00000468380 M0QZ58 72 aa7.28□□□□□ -1.24
LINC00888-201ENST00000468380 A0A1W2PPM0 123 aa7.27□□□□□ -1.25
LINC00888-201ENST00000468380 TRAV22A0A0B4J277 110 aa7.26□□□□□ -1.25
LINC00888-201ENST00000468380 BATFQ16520 125 aa7.26□□□□□ -1.25
LINC00888-201ENST00000468380 TAX1BP3O14907 124 aa7.23□□□□□ -1.25
LINC00888-201ENST00000468380 ACYP1P07311 99 aa7.22□□□□□ -1.25
LINC00888-201ENST00000468380 LINC01554Q52M75 96 aa7.22□□□□□ -1.25
LINC00888-201ENST00000468380 SPCS1Q9Y6A9 102 aa7.19□□□□□ -1.26
LINC00888-201ENST00000468380 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
LINC00888-201ENST00000468380 LCE5AQ5TCM9 118 aa7.17□□□□□ -1.26
LINC00888-201ENST00000468380 C20orf197Q8N268 126 aa7.13□□□□□ -1.27
LINC00888-201ENST00000468380 PRO0461Q9UI25 63 aa7.1□□□□□ -1.27
LINC00888-201ENST00000468380 H0Y9P7 68 aa7.08□□□□□ -1.28
LINC00888-201ENST00000468380 HMCN1Q96RW7 5635 aa7.04□□□□□ -1.28
LINC00888-201ENST00000468380 UQCRQO14949 82 aa7.04□□□□□ -1.28
LINC00888-201ENST00000468380 KRTAP19-7Q3SYF9 63 aa7.04□□□□□ -1.28
LINC00888-201ENST00000468380 KRTAP19-3Q7Z4W3 81 aa7.04□□□□□ -1.28
LINC00888-201ENST00000468380 SVIPQ8NHG7 77 aa7.04□□□□□ -1.28
LINC00888-201ENST00000468380 ATOX1O00244 68 aa7.03□□□□□ -1.28
LINC00888-201ENST00000468380 MT4P47944 62 aa7.01□□□□□ -1.29
LINC00888-201ENST00000468380 AHNAK2Q8IVF2 5795 aa6.99□□□□□ -1.29
LINC00888-201ENST00000468380 MT1EP04732 61 aa6.99□□□□□ -1.29
LINC00888-201ENST00000468380 KRTAP5-10Q6L8G5 202 aa6.99□□□□□ -1.29
LINC00888-201ENST00000468380 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
LINC00888-201ENST00000468380 SMIM6P0DI80 62 aa6.93□□□□□ -1.3
LINC00888-201ENST00000468380 LINC00208Q96KT6 92 aa6.93□□□□□ -1.3
LINC00888-201ENST00000468380 CYSTM1Q9H1C7 97 aa6.91□□□□□ -1.3
LINC00888-201ENST00000468380 MT-ATP8P03928 68 aa6.88□□□□□ -1.31
LINC00888-201ENST00000468380 HIST1H4AP62805 103 aaKnown RBP6.82□□□□□ -1.32
LINC00888-201ENST00000468380 ETDBQ3ZM63 59 aa6.81□□□□□ -1.32
LINC00888-201ENST00000468380 MT1GP13640 62 aa6.8□□□□□ -1.32
LINC00888-201ENST00000468380 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
LINC00888-201ENST00000468380 KRTAP4-6Q9BYQ5 205 aa6.79□□□□□ -1.32
LINC00888-201ENST00000468380 KRTAP5-7Q6L8G8 165 aa6.78□□□□□ -1.32
LINC00888-201ENST00000468380 KRTAP5-4Q6L8H1 288 aa6.76□□□□□ -1.33
LINC00888-201ENST00000468380 MP68P56378 58 aa6.72□□□□□ -1.33
LINC00888-201ENST00000468380 F8W1H4 67 aa6.7□□□□□ -1.34
LINC00888-201ENST00000468380 ATP5EP2Q5VTU8 51 aa6.7□□□□□ -1.34
LINC00888-201ENST00000468380 MT1MQ8N339 61 aa6.7□□□□□ -1.34
LINC00888-201ENST00000468380 OCR1Q9BZK8 76 aa6.7□□□□□ -1.34
LINC00888-201ENST00000468380 KRTAP19-5Q3LI72 72 aa6.69□□□□□ -1.34
LINC00888-201ENST00000468380 COL5A1-AS1Q5SY13 56 aa6.68□□□□□ -1.34
LINC00888-201ENST00000468380 KRTAP5-3Q6L8H2 238 aa6.68□□□□□ -1.34
LINC00888-201ENST00000468380 PP632Q6XCG6 107 aa6.68□□□□□ -1.34
LINC00888-201ENST00000468380 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
LINC00888-201ENST00000468380 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
LINC00888-201ENST00000468380 GTF2H5Q6ZYL4 71 aa6.62□□□□□ -1.35
LINC00888-201ENST00000468380 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
LINC00888-201ENST00000468380 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.35
LINC00888-201ENST00000468380 MT1LQ93083 61 aa6.58□□□□□ -1.36
LINC00888-201ENST00000468380 A0A0D9SG42 100 aa6.57□□□□□ -1.36
LINC00888-201ENST00000468380 FAM240AA0A1B0GVK7 77 aa6.56□□□□□ -1.36
LINC00888-201ENST00000468380 H3BPC8 53 aa6.54□□□□□ -1.36
LINC00888-201ENST00000468380 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
LINC00888-201ENST00000468380 SPRR5A0A1B0GTR4 108 aa6.5□□□□□ -1.37
LINC00888-201ENST00000468380 ACYP2P14621 99 aa6.48□□□□□ -1.37
LINC00888-201ENST00000468380 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
LINC00888-201ENST00000468380 LOC105371267A0A1B0GV96 52 aa6.46□□□□□ -1.38
LINC00888-201ENST00000468380 LINC00643Q86TS7 51 aa6.46□□□□□ -1.38
LINC00888-201ENST00000468380 KRTAP20-2Q3LI61 65 aa6.41□□□□□ -1.38
LINC00888-201ENST00000468380 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
LINC00888-201ENST00000468380 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
LINC00888-201ENST00000468380 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
LINC00888-201ENST00000468380 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
LINC00888-201ENST00000468380 SCGB1A1P11684 91 aa6.24□□□□□ -1.41
LINC00888-201ENST00000468380 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
LINC00888-201ENST00000468380 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
LINC00888-201ENST00000468380 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
LINC00888-201ENST00000468380 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
LINC00888-201ENST00000468380 PCP4P48539 62 aa6.15□□□□□ -1.42
LINC00888-201ENST00000468380 KRTAP12-4P60329 112 aa6.15□□□□□ -1.42
LINC00888-201ENST00000468380 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
LINC00888-201ENST00000468380 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
LINC00888-201ENST00000468380 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
LINC00888-201ENST00000468380 PCP4L1A6NKN8 68 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms