RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 KMT2AQ03164 3969 aa2.96□□□□□ -1.93
RIF1-209ENST00000467762 A8MUU9 505 aa2.96□□□□□ -1.94
RIF1-209ENST00000467762 SPTSSBQ8NFR3 76 aa2.96□□□□□ -1.94
RIF1-209ENST00000467762 SRRM2Q9UQ35 2752 aaKnown RBP2.95□□□□□ -1.94
RIF1-209ENST00000467762 A0A1B0GU69 56 aa2.95□□□□□ -1.94
RIF1-209ENST00000467762 KRTAP1-4P0C5Y4 121 aa2.95□□□□□ -1.94
RIF1-209ENST00000467762 KRTAP10-1P60331 282 aa2.95□□□□□ -1.94
RIF1-209ENST00000467762 DNAH11Q96DT5 4516 aa2.95□□□□□ -1.94
RIF1-209ENST00000467762 A6NN06 94 aa2.94□□□□□ -1.94
RIF1-209ENST00000467762 DNAH5Q8TE73 4624 aa2.93□□□□□ -1.94
RIF1-209ENST00000467762 UQCR11O14957 56 aa2.93□□□□□ -1.94
RIF1-209ENST00000467762 SPATA8Q6RVD6 105 aa2.93□□□□□ -1.94
RIF1-209ENST00000467762 LINC00304Q8N9R0 145 aa2.93□□□□□ -1.94
RIF1-209ENST00000467762 SPINK7P58062 85 aa2.92□□□□□ -1.94
RIF1-209ENST00000467762 PKD1P98161 4303 aa2.92□□□□□ -1.94
RIF1-209ENST00000467762 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
RIF1-209ENST00000467762 SACSQ9NZJ4 4579 aa2.9□□□□□ -1.95
RIF1-209ENST00000467762 MIR22HGQ0VDD5 57 aa2.89□□□□□ -1.95
RIF1-209ENST00000467762 FBN3Q75N90 2809 aa2.88□□□□□ -1.95
RIF1-209ENST00000467762 A8MU10 97 aa2.88□□□□□ -1.95
RIF1-209ENST00000467762 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
RIF1-209ENST00000467762 C20orf166-AS1Q96NR2 134 aa2.88□□□□□ -1.95
RIF1-209ENST00000467762 VPS13BQ7Z7G8 4022 aa2.88□□□□□ -1.95
RIF1-209ENST00000467762 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
RIF1-209ENST00000467762 MEGF8Q7Z7M0 2845 aa2.87□□□□□ -1.95
RIF1-209ENST00000467762 MT3P25713 68 aa2.86□□□□□ -1.95
RIF1-209ENST00000467762 A0A1B0GU33 70 aa2.85□□□□□ -1.95
RIF1-209ENST00000467762 PKHD1L1Q86WI1 4243 aa2.84□□□□□ -1.95
RIF1-209ENST00000467762 TGP01266 2768 aa2.84□□□□□ -1.95
RIF1-209ENST00000467762 LRP1BQ9NZR2 4599 aa2.83□□□□□ -1.96
RIF1-209ENST00000467762 HYDINQ4G0P3 5121 aa2.83□□□□□ -1.96
RIF1-209ENST00000467762 A0A1B0GVY2 172 aa2.82□□□□□ -1.96
RIF1-209ENST00000467762 ROMO1P60602 79 aa2.82□□□□□ -1.96
RIF1-209ENST00000467762 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
RIF1-209ENST00000467762 KRTAP10-4P60372 401 aaPredicted RBP2.8□□□□□ -1.96
RIF1-209ENST00000467762 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
RIF1-209ENST00000467762 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
RIF1-209ENST00000467762 COX6B2Q6YFQ2 88 aa2.8□□□□□ -1.96
RIF1-209ENST00000467762 APOBP04114 4563 aaKnown RBP2.79□□□□□ -1.96
RIF1-209ENST00000467762 H1FX-AS1Q4G0G2 97 aa2.78□□□□□ -1.96
RIF1-209ENST00000467762 C9orf92A6NGG3 77 aa2.77□□□□□ -1.97
RIF1-209ENST00000467762 SMR3BP02814 79 aaPredicted RBP2.77□□□□□ -1.97
RIF1-209ENST00000467762 KRTAP10-8P60410 259 aa2.76□□□□□ -1.97
RIF1-209ENST00000467762 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
RIF1-209ENST00000467762 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
RIF1-209ENST00000467762 DNHD1Q96M86 4753 aa2.74□□□□□ -1.97
RIF1-209ENST00000467762 RPL37P61927 97 aaKnown RBP2.74□□□□□ -1.97
RIF1-209ENST00000467762 H0YAA0 97 aa2.73□□□□□ -1.97
RIF1-209ENST00000467762 R4GN34 69 aa2.73□□□□□ -1.97
RIF1-209ENST00000467762 TNXBP22105 4242 aa2.72□□□□□ -1.97
RIF1-209ENST00000467762 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
RIF1-209ENST00000467762 KRTAP10-5P60370 271 aa2.72□□□□□ -1.97
RIF1-209ENST00000467762 HSPG2P98160 4391 aa2.7□□□□□ -1.98
RIF1-209ENST00000467762 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
RIF1-209ENST00000467762 CSAG1Q6PB30 78 aa2.69□□□□□ -1.98
RIF1-209ENST00000467762 S4R3F8 94 aa2.69□□□□□ -1.98
RIF1-209ENST00000467762 FAT1Q14517 4588 aa2.69□□□□□ -1.98
RIF1-209ENST00000467762 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
RIF1-209ENST00000467762 Q5VSD8 79 aa2.68□□□□□ -1.98
RIF1-209ENST00000467762 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
RIF1-209ENST00000467762 FAT3Q8TDW7 4589 aa2.67□□□□□ -1.98
RIF1-209ENST00000467762 RYR2Q92736 4967 aa2.66□□□□□ -1.98
RIF1-209ENST00000467762 FLG2Q5D862 2391 aaPredicted RBP2.66□□□□□ -1.98
RIF1-209ENST00000467762 PRO2289Q9P1D8 64 aa2.65□□□□□ -1.99
RIF1-209ENST00000467762 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
RIF1-209ENST00000467762 TPRXLQ17RH7 258 aa2.64□□□□□ -1.99
RIF1-209ENST00000467762 M0QZ58 72 aa2.63□□□□□ -1.99
RIF1-209ENST00000467762 P0C880 135 aa2.62□□□□□ -1.99
RIF1-209ENST00000467762 LRP1Q07954 4544 aaKnown RBP2.61□□□□□ -1.99
RIF1-209ENST00000467762 MT1HL1P0DM35 61 aa2.6□□□□□ -1.99
RIF1-209ENST00000467762 RYR1P21817 5038 aa2.58□□□□□ -2
RIF1-209ENST00000467762 CRIPTQ9P021 101 aa2.57□□□□□ -2
RIF1-209ENST00000467762 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
RIF1-209ENST00000467762 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
RIF1-209ENST00000467762 A0A0D9SG42 100 aa2.55□□□□□ -2
RIF1-209ENST00000467762 MYCBP2O75592 4640 aa2.53□□□□□ -2
RIF1-209ENST00000467762 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
RIF1-209ENST00000467762 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
RIF1-209ENST00000467762 DMBT1Q9UGM3 2413 aaPredicted RBP2.51□□□□□ -2.01
RIF1-209ENST00000467762 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
RIF1-209ENST00000467762 KMT2CQ8NEZ4 4911 aaKnown RBP2.49□□□□□ -2.01
RIF1-209ENST00000467762 MUC17Q685J3 4493 aa2.46□□□□□ -2.02
RIF1-209ENST00000467762 RYR3Q15413 4870 aa2.45□□□□□ -2.02
RIF1-209ENST00000467762 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
RIF1-209ENST00000467762 KIAA1109Q2LD37 5005 aa2.41□□□□□ -2.02
RIF1-209ENST00000467762 C10orf95Q9H7T3 257 aa2.41□□□□□ -2.02
RIF1-209ENST00000467762 LRP2P98164 4655 aa2.39□□□□□ -2.03
RIF1-209ENST00000467762 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
RIF1-209ENST00000467762 INE1O15225 51 aa2.38□□□□□ -2.03
RIF1-209ENST00000467762 ABCA13Q86UQ4 5058 aa2.36□□□□□ -2.03
RIF1-209ENST00000467762 LPAP08519 4548 aa2.36□□□□□ -2.03
RIF1-209ENST00000467762 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
RIF1-209ENST00000467762 FLGP20930 4061 aaPredicted RBP2.35□□□□□ -2.03
RIF1-209ENST00000467762 KRTAP4-1Q9BYQ7 146 aa2.35□□□□□ -2.03
RIF1-209ENST00000467762 EPPK1P58107 5090 aaKnown RBP2.34□□□□□ -2.03
RIF1-209ENST00000467762 PLAC4Q8WY50 150 aa2.34□□□□□ -2.03
RIF1-209ENST00000467762 TNP1P09430 55 aa2.32□□□□□ -2.04
RIF1-209ENST00000467762 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
RIF1-209ENST00000467762 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
RIF1-209ENST00000467762 HERC1Q15751 4861 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms