RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 C14orf144Q96I85 54 aa-1.62□□□□□ -2.67
LRCH3-211ENST00000466054 TCEAL7Q9BRU2 100 aa-1.62□□□□□ -2.67
LRCH3-211ENST00000466054 UACAQ9BZF9 1416 aa-1.63□□□□□ -2.67
LRCH3-211ENST00000466054 S100A8P05109 93 aa-1.63□□□□□ -2.67
LRCH3-211ENST00000466054 HMGN2P05204 90 aaKnown RBP-1.63□□□□□ -2.67
LRCH3-211ENST00000466054 TTTY10Q9BZA0 68 aa-1.63□□□□□ -2.67
LRCH3-211ENST00000466054 UBL5Q9BZL1 73 aa-1.63□□□□□ -2.67
LRCH3-211ENST00000466054 TTC37Q6PGP7 1564 aa-1.64□□□□□ -2.67
LRCH3-211ENST00000466054 CENPFP49454 3210 aa-1.64□□□□□ -2.67
LRCH3-211ENST00000466054 MROH1Q8NDA8 1641 aa-1.64□□□□□ -2.67
LRCH3-211ENST00000466054 UMAD1C9J7I0 102 aa-1.64□□□□□ -2.67
LRCH3-211ENST00000466054 KCNQ1DNQ9H478 68 aa-1.64□□□□□ -2.67
LRCH3-211ENST00000466054 ANKRD26Q9UPS8 1709 aa-1.64□□□□□ -2.67
LRCH3-211ENST00000466054 RALGAPBQ86X10 1494 aa-1.64□□□□□ -2.67
LRCH3-211ENST00000466054 HMGA1P17096 107 aaKnown RBP-1.65□□□□□ -2.67
LRCH3-211ENST00000466054 CRIP1P50238 77 aa-1.65□□□□□ -2.67
LRCH3-211ENST00000466054 AKAP12Q02952 1782 aa-1.65□□□□□ -2.67
LRCH3-211ENST00000466054 XIRP2A4UGR9 3374 aa-1.65□□□□□ -2.67
LRCH3-211ENST00000466054 FAUP35544 74 aaKnown RBP-1.66□□□□□ -2.68
LRCH3-211ENST00000466054 SMIM11AP58511 58 aa-1.66□□□□□ -2.68
LRCH3-211ENST00000466054 ABRACLQ9P1F3 81 aa-1.66□□□□□ -2.68
LRCH3-211ENST00000466054 C3P01024 1663 aa-1.67□□□□□ -2.68
LRCH3-211ENST00000466054 DIP2AQ14689 1571 aa-1.67□□□□□ -2.68
LRCH3-211ENST00000466054 PEA15Q15121 130 aa-1.67□□□□□ -2.68
LRCH3-211ENST00000466054 NREPQ16612 68 aa-1.67□□□□□ -2.68
LRCH3-211ENST00000466054 KAAG1Q9UBP8 84 aa-1.67□□□□□ -2.68
LRCH3-211ENST00000466054 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.67□□□□□ -2.68
LRCH3-211ENST00000466054 NRXN3Q9Y4C0 1643 aa-1.67□□□□□ -2.68
LRCH3-211ENST00000466054 RRBP1Q9P2E9 1410 aaKnown RBP-1.67□□□□□ -2.68
LRCH3-211ENST00000466054 CCDC180Q9P1Z9 1646 aa-1.68□□□□□ -2.68
LRCH3-211ENST00000466054 MYMXA0A1B0GTQ4 84 aa-1.68□□□□□ -2.68
LRCH3-211ENST00000466054 RBP2P50120 134 aa-1.68□□□□□ -2.68
LRCH3-211ENST00000466054 CDH23Q9H251 3354 aa-1.69□□□□□ -2.68
LRCH3-211ENST00000466054 ETDCA0A1B0GVM5 59 aa-1.69□□□□□ -2.68
LRCH3-211ENST00000466054 POLR2KP53803 58 aaKnown RBP-1.69□□□□□ -2.68
LRCH3-211ENST00000466054 CNTLNQ9NXG0 1405 aa-1.69□□□□□ -2.68
LRCH3-211ENST00000466054 PVALEFA0A1B0GWK0 134 aa-1.7□□□□□ -2.68
LRCH3-211ENST00000466054 CEBPZOSA8MTT3 80 aa-1.7□□□□□ -2.68
LRCH3-211ENST00000466054 RABAC1Q9UI14 185 aa-1.7□□□□□ -2.68
LRCH3-211ENST00000466054 TIAM1Q13009 1591 aa-1.71□□□□□ -2.68
LRCH3-211ENST00000466054 MADDQ8WXG6 1647 aa-1.71□□□□□ -2.68
LRCH3-211ENST00000466054 BRCA2P51587 3418 aa-1.71□□□□□ -2.68
LRCH3-211ENST00000466054 ABCC6O95255 1503 aa-1.71□□□□□ -2.68
LRCH3-211ENST00000466054 KDM5DQ9BY66 1539 aa-1.71□□□□□ -2.68
LRCH3-211ENST00000466054 GLI2P10070 1586 aa-1.72□□□□□ -2.68
LRCH3-211ENST00000466054 MROH2AA6NES4 1674 aa-1.72□□□□□ -2.68
LRCH3-211ENST00000466054 VPS13AQ96RL7 3174 aa-1.72□□□□□ -2.69
LRCH3-211ENST00000466054 CEP162Q5TB80 1403 aa-1.73□□□□□ -2.69
LRCH3-211ENST00000466054 ATP5EP2Q5VTU8 51 aa-1.73□□□□□ -2.69
LRCH3-211ENST00000466054 SMIM27A0A1W2PRY6 76 aa-1.74□□□□□ -2.69
LRCH3-211ENST00000466054 ATP6V1G2-DDX39BF2Z307 99 aa-1.74□□□□□ -2.69
LRCH3-211ENST00000466054 DEFB114Q30KQ6 69 aa-1.74□□□□□ -2.69
LRCH3-211ENST00000466054 KRTAP19-2Q3LHN2 52 aa-1.74□□□□□ -2.69
LRCH3-211ENST00000466054 LMO7Q8WWI1 1683 aa-1.75□□□□□ -2.69
LRCH3-211ENST00000466054 WFDC10BQ8IUB3 73 aa-1.76□□□□□ -2.69
LRCH3-211ENST00000466054 A0A087WXM4 84 aa-1.77□□□□□ -2.69
LRCH3-211ENST00000466054 SNRPFP62306 86 aaKnown RBP-1.77□□□□□ -2.69
LRCH3-211ENST00000466054 ENHOQ6UWT2 76 aa-1.77□□□□□ -2.69
LRCH3-211ENST00000466054 LINC00643Q86TS7 51 aa-1.77□□□□□ -2.69
LRCH3-211ENST00000466054 ALS2Q96Q42 1657 aa-1.77□□□□□ -2.69
LRCH3-211ENST00000466054 LMTK2Q8IWU2 1503 aa-1.78□□□□□ -2.69
LRCH3-211ENST00000466054 SCRIBQ14160 1630 aa-1.78□□□□□ -2.69
LRCH3-211ENST00000466054 PEG3Q9GZU2 1588 aa-1.79□□□□□ -2.7
LRCH3-211ENST00000466054 GYPAP02724 150 aa-1.79□□□□□ -2.7
LRCH3-211ENST00000466054 DEFB131AP59861 70 aa-1.79□□□□□ -2.7
LRCH3-211ENST00000466054 DEFB133Q30KQ1 61 aa-1.8□□□□□ -2.7
LRCH3-211ENST00000466054 NCMAPQ5T1S8 102 aa-1.8□□□□□ -2.7
LRCH3-211ENST00000466054 TMEM167BQ9NRX6 74 aa-1.8□□□□□ -2.7
LRCH3-211ENST00000466054 SMIM13P0DJ93 91 aa-1.81□□□□□ -2.7
LRCH3-211ENST00000466054 NMES1Q9C002 83 aa-1.81□□□□□ -2.7
LRCH3-211ENST00000466054 ANKARQ7Z5J8 1434 aa-1.82□□□□□ -2.7
LRCH3-211ENST00000466054 M0R143 59 aa-1.83□□□□□ -2.7
LRCH3-211ENST00000466054 CD52P31358 61 aa-1.83□□□□□ -2.7
LRCH3-211ENST00000466054 LINC00308Q8TCZ7 52 aa-1.83□□□□□ -2.7
LRCH3-211ENST00000466054 EFCAB6Q5THR3 1501 aa-1.83□□□□□ -2.7
LRCH3-211ENST00000466054 UTRNP46939 3433 aa-1.84□□□□□ -2.7
LRCH3-211ENST00000466054 VPS8Q8N3P4 1428 aa-1.84□□□□□ -2.7
LRCH3-211ENST00000466054 ABCC3O15438 1527 aa-1.86□□□□□ -2.71
LRCH3-211ENST00000466054 KANTRA0A1W2PQU2 76 aa-1.86□□□□□ -2.71
LRCH3-211ENST00000466054 K7EMI3 77 aa-1.86□□□□□ -2.71
LRCH3-211ENST00000466054 DEFB121Q5J5C9 76 aa-1.86□□□□□ -2.71
LRCH3-211ENST00000466054 RB1CC1Q8TDY2 1594 aa-1.86□□□□□ -2.71
LRCH3-211ENST00000466054 RHPN1-AS1Q9BWJ2 59 aa-1.87□□□□□ -2.71
LRCH3-211ENST00000466054 CFAP74Q9C0B2 1584 aa-1.88□□□□□ -2.71
LRCH3-211ENST00000466054 S100A16Q96FQ6 103 aaKnown RBP-1.88□□□□□ -2.71
LRCH3-211ENST00000466054 SYCP2Q9BX26 1530 aa-1.88□□□□□ -2.71
LRCH3-211ENST00000466054 AGLP35573 1532 aa-1.89□□□□□ -2.71
LRCH3-211ENST00000466054 HTN1P15515 57 aa-1.89□□□□□ -2.71
LRCH3-211ENST00000466054 PYY3Q5JQD4 70 aa-1.89□□□□□ -2.71
LRCH3-211ENST00000466054 ABCC1P33527 1531 aa-1.9□□□□□ -2.71
LRCH3-211ENST00000466054 SMIM2Q9BVW6 85 aa-1.9□□□□□ -2.71
LRCH3-211ENST00000466054 H3BVH4 76 aa-1.91□□□□□ -2.72
LRCH3-211ENST00000466054 ATXN8Q156A1 80 aa-1.91□□□□□ -2.72
LRCH3-211ENST00000466054 UGGT1Q9NYU2 1555 aa-1.91□□□□□ -2.72
LRCH3-211ENST00000466054 DDX60Q8IY21 1712 aaKnown RBP-1.91□□□□□ -2.72
LRCH3-211ENST00000466054 M0R1W7 72 aa-1.92□□□□□ -2.72
LRCH3-211ENST00000466054 S100ZQ8WXG8 99 aa-1.92□□□□□ -2.72
LRCH3-211ENST00000466054 ABCA8O94911 1581 aa-1.93□□□□□ -2.72
LRCH3-211ENST00000466054 SERF2P84101 59 aa-1.93□□□□□ -2.72
LRCH3-211ENST00000466054 DUOX2Q9NRD8 1548 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms