RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 M0QY20 66 aa-0.29□□□□□ -2.46
NDUFA4-202ENST00000463308 SERF2P84101 59 aa-0.29□□□□□ -2.46
NDUFA4-202ENST00000463308 LINC00308Q8TCZ7 52 aa-0.29□□□□□ -2.46
NDUFA4-202ENST00000463308 S100ZQ8WXG8 99 aa-0.29□□□□□ -2.46
NDUFA4-202ENST00000463308 CSMD1Q96PZ7 3565 aa-0.29□□□□□ -2.46
NDUFA4-202ENST00000463308 MYO9AB2RTY4 2548 aa-0.29□□□□□ -2.46
NDUFA4-202ENST00000463308 DNAH10Q8IVF4 4471 aa-0.3□□□□□ -2.46
NDUFA4-202ENST00000463308 ITSN2Q9NZM3 1697 aa-0.3□□□□□ -2.46
NDUFA4-202ENST00000463308 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.3□□□□□ -2.46
NDUFA4-202ENST00000463308 CEP290O15078 2479 aa-0.3□□□□□ -2.46
NDUFA4-202ENST00000463308 SPART-AS1P0CW21 52 aa-0.3□□□□□ -2.46
NDUFA4-202ENST00000463308 TLN2Q9Y4G6 2542 aa-0.3□□□□□ -2.46
NDUFA4-202ENST00000463308 ABCA9Q8IUA7 1624 aa-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 ATMQ13315 3056 aa-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 INO80Q9ULG1 1556 aaPredicted RBP-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 RANBP2P49792 3224 aaKnown RBP-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 ACACBO00763 2458 aa-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 TMEM167BQ9NRX6 74 aa-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 LY75O60449 1722 aa-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 TLN1Q9Y490 2541 aaKnown RBP-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 EEA1Q15075 1411 aa-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 RNF17Q9BXT8 1623 aaKnown RBP-0.31□□□□□ -2.46
NDUFA4-202ENST00000463308 BPTFQ12830 3046 aa-0.32□□□□□ -2.46
NDUFA4-202ENST00000463308 MT1HP80294 61 aa-0.32□□□□□ -2.46
NDUFA4-202ENST00000463308 MROH1Q8NDA8 1641 aa-0.32□□□□□ -2.46
NDUFA4-202ENST00000463308 VPS13CQ709C8 3753 aa-0.32□□□□□ -2.46
NDUFA4-202ENST00000463308 SPTAN1Q13813 2472 aaKnown RBP-0.32□□□□□ -2.46
NDUFA4-202ENST00000463308 EYSQ5T1H1 3165 aa-0.33□□□□□ -2.46
NDUFA4-202ENST00000463308 M0QZ58 72 aa-0.33□□□□□ -2.46
NDUFA4-202ENST00000463308 SMR3BP02814 79 aaPredicted RBP-0.33□□□□□ -2.46
NDUFA4-202ENST00000463308 KRTAP19-5Q3LI72 72 aa-0.33□□□□□ -2.46
NDUFA4-202ENST00000463308 DMXL2Q8TDJ6 3036 aa-0.33□□□□□ -2.46
NDUFA4-202ENST00000463308 NHSQ6T4R5 1651 aa-0.33□□□□□ -2.46
NDUFA4-202ENST00000463308 PRUNE2Q8WUY3 3088 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 MADDQ8WXG6 1647 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 ZFHX4Q86UP3 3567 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 A0A087WWC5 75 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 GLI2P10070 1586 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 DMDP11532 3685 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 SMIM5Q71RC9 77 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 ADGRG4Q8IZF6 3080 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 BOD1L1Q8NFC6 3051 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 C3P01024 1663 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 EFCAB6Q5THR3 1501 aa-0.34□□□□□ -2.46
NDUFA4-202ENST00000463308 IGIPA6NJ69 53 aa-0.35□□□□□ -2.47
NDUFA4-202ENST00000463308 A8MTW9 85 aa-0.35□□□□□ -2.47
NDUFA4-202ENST00000463308 H0YGX0 51 aa-0.35□□□□□ -2.47
NDUFA4-202ENST00000463308 TFF3Q07654 80 aa-0.35□□□□□ -2.47
NDUFA4-202ENST00000463308 A0A1B0GUL6 1792 aa-0.35□□□□□ -2.47
NDUFA4-202ENST00000463308 MGAQ8IWI9 3026 aa-0.35□□□□□ -2.47
NDUFA4-202ENST00000463308 CDC42BPAQ5VT25 1732 aa-0.35□□□□□ -2.47
NDUFA4-202ENST00000463308 UGGT1Q9NYU2 1555 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 MAST1Q9Y2H9 1570 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 CROCC2H7BZ55 1655 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 MYO15AQ9UKN7 3530 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 EFCAB5A4FU69 1503 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 CPS1P31327 1500 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 CLASP1Q7Z460 1538 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 LINC01546A6NGU7 62 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 MT1HL1P0DM35 61 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 TIAM1Q13009 1591 aa-0.36□□□□□ -2.47
NDUFA4-202ENST00000463308 FREM2Q5SZK8 3169 aa-0.37□□□□□ -2.47
NDUFA4-202ENST00000463308 CRYBG3Q68DQ2 2970 aa-0.37□□□□□ -2.47
NDUFA4-202ENST00000463308 MT1XP80297 61 aa-0.37□□□□□ -2.47
NDUFA4-202ENST00000463308 KRTAP8-1Q8IUC2 63 aa-0.37□□□□□ -2.47
NDUFA4-202ENST00000463308 CSMD2Q7Z408 3487 aa-0.37□□□□□ -2.47
NDUFA4-202ENST00000463308 PLNP26678 52 aa-0.38□□□□□ -2.47
NDUFA4-202ENST00000463308 ABCA6Q8N139 1617 aa-0.38□□□□□ -2.47
NDUFA4-202ENST00000463308 POLR2KP53803 58 aaKnown RBP-0.39□□□□□ -2.47
NDUFA4-202ENST00000463308 KRTAP20-1Q3LI63 56 aa-0.39□□□□□ -2.47
NDUFA4-202ENST00000463308 CENPEQ02224 2701 aa-0.4□□□□□ -2.47
NDUFA4-202ENST00000463308 CCDC180Q9P1Z9 1646 aa-0.4□□□□□ -2.47
NDUFA4-202ENST00000463308 ALS2Q96Q42 1657 aa-0.4□□□□□ -2.47
NDUFA4-202ENST00000463308 FAM208AQ9UK61 1670 aaKnown RBP-0.4□□□□□ -2.47
NDUFA4-202ENST00000463308 WDFY3Q8IZQ1 3526 aa-0.41□□□□□ -2.47
NDUFA4-202ENST00000463308 PREX2Q70Z35 1606 aa-0.41□□□□□ -2.47
NDUFA4-202ENST00000463308 SMIM31A0A1B0GVY4 71 aa-0.41□□□□□ -2.48
NDUFA4-202ENST00000463308 MT1EP04732 61 aa-0.41□□□□□ -2.48
NDUFA4-202ENST00000463308 MT1BP07438 61 aa-0.41□□□□□ -2.48
NDUFA4-202ENST00000463308 MT1GP13640 62 aa-0.41□□□□□ -2.48
NDUFA4-202ENST00000463308 MT1MQ8N339 61 aa-0.41□□□□□ -2.48
NDUFA4-202ENST00000463308 DEFB4AO15263 64 aa-0.42□□□□□ -2.48
NDUFA4-202ENST00000463308 MT2AP02795 61 aa-0.42□□□□□ -2.48
NDUFA4-202ENST00000463308 DEFB131AP59861 70 aa-0.42□□□□□ -2.48
NDUFA4-202ENST00000463308 MT1LQ93083 61 aa-0.42□□□□□ -2.48
NDUFA4-202ENST00000463308 SMIM2Q9BVW6 85 aa-0.42□□□□□ -2.48
NDUFA4-202ENST00000463308 PRXQ9BXM0 1461 aa-0.42□□□□□ -2.48
NDUFA4-202ENST00000463308 FRYLO94915 3013 aa-0.43□□□□□ -2.48
NDUFA4-202ENST00000463308 CFAP54Q96N23 3096 aa-0.43□□□□□ -2.48
NDUFA4-202ENST00000463308 SCRIBQ14160 1630 aa-0.43□□□□□ -2.48
NDUFA4-202ENST00000463308 SPEGQ15772 3267 aa-0.43□□□□□ -2.48
NDUFA4-202ENST00000463308 CEP350Q5VT06 3117 aa-0.43□□□□□ -2.48
NDUFA4-202ENST00000463308 ABCA10Q8WWZ4 1543 aa-0.43□□□□□ -2.48
NDUFA4-202ENST00000463308 KRTAP19-6Q3LI70 58 aa-0.44□□□□□ -2.48
NDUFA4-202ENST00000463308 LEAP2Q969E1 77 aa-0.44□□□□□ -2.48
NDUFA4-202ENST00000463308 AGLP35573 1532 aa-0.44□□□□□ -2.48
NDUFA4-202ENST00000463308 DNAH14Q0VDD8 3507 aa-0.44□□□□□ -2.48
NDUFA4-202ENST00000463308 USP34Q70CQ2 3546 aa-0.44□□□□□ -2.48
NDUFA4-202ENST00000463308 KIF21BO75037 1637 aa-0.45□□□□□ -2.48
NDUFA4-202ENST00000463308 LMO7Q8WWI1 1683 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms