RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 NOTCH2Q04721 2471 aa2.09□□□□□ -2.07
COPS3-205ENST00000463097 A0A087WTM6 91 aa2.09□□□□□ -2.07
COPS3-205ENST00000463097 RPS29P62273 56 aaKnown RBP2.09□□□□□ -2.07
COPS3-205ENST00000463097 PDZD2O15018 2839 aa2.08□□□□□ -2.08
COPS3-205ENST00000463097 NBDYA0A0U1RRE5 68 aa2.08□□□□□ -2.08
COPS3-205ENST00000463097 RPL37P61927 97 aaKnown RBP2.08□□□□□ -2.08
COPS3-205ENST00000463097 MTORP42345 2549 aa2.08□□□□□ -2.08
COPS3-205ENST00000463097 ABCA12Q86UK0 2595 aa2.07□□□□□ -2.08
COPS3-205ENST00000463097 FLNAP21333 2647 aaKnown RBP2.07□□□□□ -2.08
COPS3-205ENST00000463097 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
COPS3-205ENST00000463097 SETD2Q9BYW2 2564 aaPredicted RBP2.07□□□□□ -2.08
COPS3-205ENST00000463097 HECTD1Q9ULT8 2610 aa2.06□□□□□ -2.08
COPS3-205ENST00000463097 DYNC2H1Q8NCM8 4307 aaKnown RBP2.06□□□□□ -2.08
COPS3-205ENST00000463097 SPINK1P00995 79 aa2.06□□□□□ -2.08
COPS3-205ENST00000463097 KRTAP21-3Q3LHN1 58 aa2.06□□□□□ -2.08
COPS3-205ENST00000463097 CCDC168Q8NDH2 2452 aa2.06□□□□□ -2.08
COPS3-205ENST00000463097 DNAH17Q9UFH2 4485 aa2.05□□□□□ -2.08
COPS3-205ENST00000463097 TENM1Q9UKZ4 2725 aa2.04□□□□□ -2.08
COPS3-205ENST00000463097 PKD1L1Q8TDX9 2849 aa2.04□□□□□ -2.08
COPS3-205ENST00000463097 DNAH8Q96JB1 4490 aa2.04□□□□□ -2.08
COPS3-205ENST00000463097 F8P00451 2351 aa2.04□□□□□ -2.08
COPS3-205ENST00000463097 CRIPTQ9P021 101 aa2.04□□□□□ -2.08
COPS3-205ENST00000463097 DNAH10Q8IVF4 4471 aa2.04□□□□□ -2.08
COPS3-205ENST00000463097 DNAH3Q8TD57 4116 aa2.04□□□□□ -2.08
COPS3-205ENST00000463097 FBN3Q75N90 2809 aa2.03□□□□□ -2.08
COPS3-205ENST00000463097 SMR3AQ99954 134 aa2.03□□□□□ -2.08
COPS3-205ENST00000463097 SONP18583 2426 aaKnown RBP2.03□□□□□ -2.08
COPS3-205ENST00000463097 CSMD2Q7Z408 3487 aa2.03□□□□□ -2.08
COPS3-205ENST00000463097 TENM3Q9P273 2699 aa2.02□□□□□ -2.09
COPS3-205ENST00000463097 VPS13DQ5THJ4 4388 aa2.01□□□□□ -2.09
COPS3-205ENST00000463097 TRRAPQ9Y4A5 3859 aa2□□□□□ -2.09
COPS3-205ENST00000463097 LYSTQ99698 3801 aa1.99□□□□□ -2.09
COPS3-205ENST00000463097 FBN1P35555 2871 aaKnown RBP1.99□□□□□ -2.09
COPS3-205ENST00000463097 NBEAL1Q6ZS30 2694 aa1.98□□□□□ -2.09
COPS3-205ENST00000463097 NSD1Q96L73 2696 aaPredicted RBP1.98□□□□□ -2.09
COPS3-205ENST00000463097 MEGF8Q7Z7M0 2845 aa1.98□□□□□ -2.09
COPS3-205ENST00000463097 ATRQ13535 2644 aa1.98□□□□□ -2.09
COPS3-205ENST00000463097 DNAH2Q9P225 4427 aa1.97□□□□□ -2.09
COPS3-205ENST00000463097 DNAH9Q9NYC9 4486 aa1.97□□□□□ -2.09
COPS3-205ENST00000463097 HUWE1Q7Z6Z7 4374 aaKnown RBP1.96□□□□□ -2.09
COPS3-205ENST00000463097 S4R3F8 94 aa1.96□□□□□ -2.1
COPS3-205ENST00000463097 ACANP16112 2415 aa1.96□□□□□ -2.1
COPS3-205ENST00000463097 ANK2Q01484 3957 aa1.95□□□□□ -2.1
COPS3-205ENST00000463097 ZNF469Q96JG9 3925 aaPredicted RBP1.95□□□□□ -2.1
COPS3-205ENST00000463097 ITPR2Q14571 2701 aa1.95□□□□□ -2.1
COPS3-205ENST00000463097 CUBNO60494 3623 aa1.95□□□□□ -2.1
COPS3-205ENST00000463097 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
COPS3-205ENST00000463097 HECTD4Q9Y4D8 3996 aa1.94□□□□□ -2.1
COPS3-205ENST00000463097 M0QZ58 72 aa1.94□□□□□ -2.1
COPS3-205ENST00000463097 KRTAP4-3Q9BYR4 195 aa1.94□□□□□ -2.1
COPS3-205ENST00000463097 PRKDCP78527 4128 aaKnown RBP1.94□□□□□ -2.1
COPS3-205ENST00000463097 COL7A1Q02388 2944 aa1.94□□□□□ -2.1
COPS3-205ENST00000463097 TGP01266 2768 aa1.93□□□□□ -2.1
COPS3-205ENST00000463097 PLECQ15149 4684 aaKnown RBP1.93□□□□□ -2.1
COPS3-205ENST00000463097 DNAH11Q96DT5 4516 aa1.92□□□□□ -2.1
COPS3-205ENST00000463097 CMYA5Q8N3K9 4069 aa1.92□□□□□ -2.1
COPS3-205ENST00000463097 DNAH6Q9C0G6 4158 aa1.92□□□□□ -2.1
COPS3-205ENST00000463097 SACSQ9NZJ4 4579 aa1.92□□□□□ -2.1
COPS3-205ENST00000463097 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
COPS3-205ENST00000463097 PLAC4Q8WY50 150 aa1.92□□□□□ -2.1
COPS3-205ENST00000463097 C10orf95Q9H7T3 257 aa1.92□□□□□ -2.1
COPS3-205ENST00000463097 FRAS1Q86XX4 4008 aa1.92□□□□□ -2.1
COPS3-205ENST00000463097 DNHD1Q96M86 4753 aa1.92□□□□□ -2.1
COPS3-205ENST00000463097 NOTCH1P46531 2555 aa1.91□□□□□ -2.1
COPS3-205ENST00000463097 DNAH7Q8WXX0 4024 aa1.91□□□□□ -2.1
COPS3-205ENST00000463097 STAB2Q8WWQ8 2551 aa1.9□□□□□ -2.11
COPS3-205ENST00000463097 FLG2Q5D862 2391 aaPredicted RBP1.9□□□□□ -2.11
COPS3-205ENST00000463097 A0A0D9SG42 100 aa1.89□□□□□ -2.11
COPS3-205ENST00000463097 LRP1BQ9NZR2 4599 aa1.88□□□□□ -2.11
COPS3-205ENST00000463097 COL6A5A8TX70 2615 aa1.87□□□□□ -2.11
COPS3-205ENST00000463097 KRTAP10-4P60372 401 aaPredicted RBP1.86□□□□□ -2.11
COPS3-205ENST00000463097 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
COPS3-205ENST00000463097 DNAH5Q8TE73 4624 aa1.85□□□□□ -2.11
COPS3-205ENST00000463097 STAB1Q9NY15 2570 aa1.85□□□□□ -2.11
COPS3-205ENST00000463097 CSMD3Q7Z407 3707 aa1.83□□□□□ -2.12
COPS3-205ENST00000463097 PKHD1L1Q86WI1 4243 aa1.82□□□□□ -2.12
COPS3-205ENST00000463097 PKD1P98161 4303 aa1.81□□□□□ -2.12
COPS3-205ENST00000463097 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
COPS3-205ENST00000463097 MYCBP2O75592 4640 aa1.8□□□□□ -2.12
COPS3-205ENST00000463097 STARD9Q9P2P6 4700 aa1.8□□□□□ -2.12
COPS3-205ENST00000463097 DYNC1H1Q14204 4646 aaKnown RBP1.8□□□□□ -2.12
COPS3-205ENST00000463097 APOBP04114 4563 aaKnown RBP1.79□□□□□ -2.12
COPS3-205ENST00000463097 MGAM2Q2M2H8 2515 aa1.79□□□□□ -2.12
COPS3-205ENST00000463097 LRP1Q07954 4544 aaKnown RBP1.79□□□□□ -2.12
COPS3-205ENST00000463097 FAT3Q8TDW7 4589 aa1.78□□□□□ -2.13
COPS3-205ENST00000463097 KMT2AQ03164 3969 aa1.77□□□□□ -2.13
COPS3-205ENST00000463097 FAT2Q9NYQ8 4349 aa1.75□□□□□ -2.13
COPS3-205ENST00000463097 PKHD1P08F94 4074 aa1.75□□□□□ -2.13
COPS3-205ENST00000463097 VPS13BQ7Z7G8 4022 aa1.75□□□□□ -2.13
COPS3-205ENST00000463097 HSPG2P98160 4391 aa1.75□□□□□ -2.13
COPS3-205ENST00000463097 FAT1Q14517 4588 aa1.74□□□□□ -2.13
COPS3-205ENST00000463097 TNXBP22105 4242 aa1.73□□□□□ -2.13
COPS3-205ENST00000463097 Q5VSD8 79 aa1.72□□□□□ -2.13
COPS3-205ENST00000463097 RYR3Q15413 4870 aa1.71□□□□□ -2.14
COPS3-205ENST00000463097 DMBT1Q9UGM3 2413 aaPredicted RBP1.7□□□□□ -2.14
COPS3-205ENST00000463097 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
COPS3-205ENST00000463097 TNP1P09430 55 aa1.7□□□□□ -2.14
COPS3-205ENST00000463097 KMT2CQ8NEZ4 4911 aaKnown RBP1.69□□□□□ -2.14
COPS3-205ENST00000463097 BIRC6Q9NR09 4857 aa1.68□□□□□ -2.14
COPS3-205ENST00000463097 SMR3BP02814 79 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms