RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 NOP10Q9NPE3 64 aaKnown RBP2.9□□□□□ -1.95
LRCH3-210ENST00000461674 CEBPZOSA8MTT3 80 aa2.89□□□□□ -1.95
LRCH3-210ENST00000461674 PLAC8Q9NZF1 115 aa2.89□□□□□ -1.95
LRCH3-210ENST00000461674 FAT3Q8TDW7 4589 aa2.88□□□□□ -1.95
LRCH3-210ENST00000461674 PRO0255Q9UI72 69 aa2.88□□□□□ -1.95
LRCH3-210ENST00000461674 SMIM13P0DJ93 91 aa2.87□□□□□ -1.95
LRCH3-210ENST00000461674 LINC01556Q5JQF7 62 aa2.87□□□□□ -1.95
LRCH3-210ENST00000461674 GNG13Q9P2W3 67 aa2.87□□□□□ -1.95
LRCH3-210ENST00000461674 DNAH8Q96JB1 4490 aa2.87□□□□□ -1.95
LRCH3-210ENST00000461674 TNXBP22105 4242 aa2.86□□□□□ -1.95
LRCH3-210ENST00000461674 GCHFRP30047 84 aa2.86□□□□□ -1.95
LRCH3-210ENST00000461674 HAMPP81172 84 aa2.86□□□□□ -1.95
LRCH3-210ENST00000461674 SPATA8Q6RVD6 105 aa2.86□□□□□ -1.95
LRCH3-210ENST00000461674 UBE2D4Q9Y2X8 147 aa2.86□□□□□ -1.95
LRCH3-210ENST00000461674 SPINK4O60575 86 aa2.85□□□□□ -1.95
LRCH3-210ENST00000461674 DEFB1P60022 68 aa2.85□□□□□ -1.95
LRCH3-210ENST00000461674 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.95
LRCH3-210ENST00000461674 HTN1P15515 57 aa2.84□□□□□ -1.95
LRCH3-210ENST00000461674 C10orf113Q5VZT2 155 aa2.83□□□□□ -1.96
LRCH3-210ENST00000461674 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
LRCH3-210ENST00000461674 WFDC10BQ8IUB3 73 aa2.83□□□□□ -1.96
LRCH3-210ENST00000461674 MUC2Q02817 5179 aa2.82□□□□□ -1.96
LRCH3-210ENST00000461674 H0Y9P7 68 aa2.82□□□□□ -1.96
LRCH3-210ENST00000461674 IAPPP10997 89 aa2.82□□□□□ -1.96
LRCH3-210ENST00000461674 SPINK9Q5DT21 86 aa2.82□□□□□ -1.96
LRCH3-210ENST00000461674 LELP1Q5T871 98 aa2.82□□□□□ -1.96
LRCH3-210ENST00000461674 TMEM167BQ9NRX6 74 aa2.82□□□□□ -1.96
LRCH3-210ENST00000461674 Q6JHZ5 121 aa2.81□□□□□ -1.96
LRCH3-210ENST00000461674 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
LRCH3-210ENST00000461674 SPINK7P58062 85 aa2.79□□□□□ -1.96
LRCH3-210ENST00000461674 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
LRCH3-210ENST00000461674 SMIM27A0A1W2PRY6 76 aa2.78□□□□□ -1.96
LRCH3-210ENST00000461674 ARL14EPLP0DKL9 152 aa2.78□□□□□ -1.96
LRCH3-210ENST00000461674 SPINK6Q6UWN8 80 aa2.77□□□□□ -1.97
LRCH3-210ENST00000461674 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
LRCH3-210ENST00000461674 TRBV6-1A0A0K0K1D8 114 aa2.75□□□□□ -1.97
LRCH3-210ENST00000461674 C3orf79P0CE67 100 aa2.74□□□□□ -1.97
LRCH3-210ENST00000461674 A0A1B0GUT8 65 aa2.73□□□□□ -1.97
LRCH3-210ENST00000461674 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
LRCH3-210ENST00000461674 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
LRCH3-210ENST00000461674 ANGP03950 147 aaKnown RBP2.72□□□□□ -1.97
LRCH3-210ENST00000461674 ATP5EP2Q5VTU8 51 aa2.72□□□□□ -1.97
LRCH3-210ENST00000461674 TRBV7-4A0A0J9YYF1 115 aa2.71□□□□□ -1.98
LRCH3-210ENST00000461674 TRAV21A0A0B4J279 112 aa2.7□□□□□ -1.98
LRCH3-210ENST00000461674 COX8AP10176 69 aa2.7□□□□□ -1.98
LRCH3-210ENST00000461674 LINC01549A6NIU2 74 aa2.69□□□□□ -1.98
LRCH3-210ENST00000461674 ENHOQ6UWT2 76 aa2.69□□□□□ -1.98
LRCH3-210ENST00000461674 LPAP08519 4548 aa2.68□□□□□ -1.98
LRCH3-210ENST00000461674 LINC01546A6NGU7 62 aa2.68□□□□□ -1.98
LRCH3-210ENST00000461674 IFI27P40305 119 aaPredicted RBP2.68□□□□□ -1.98
LRCH3-210ENST00000461674 K7EMI3 77 aa2.67□□□□□ -1.98
LRCH3-210ENST00000461674 CNFNQ9BYD5 112 aa2.67□□□□□ -1.98
LRCH3-210ENST00000461674 A0A1B0GU69 56 aa2.66□□□□□ -1.98
LRCH3-210ENST00000461674 FCER1GP30273 86 aa2.65□□□□□ -1.99
LRCH3-210ENST00000461674 PLNP26678 52 aa2.64□□□□□ -1.99
LRCH3-210ENST00000461674 COX6A2Q02221 97 aa2.64□□□□□ -1.99
LRCH3-210ENST00000461674 CRIP1P50238 77 aa2.63□□□□□ -1.99
LRCH3-210ENST00000461674 SSBP3-AS1Q7Z2R9 100 aa2.62□□□□□ -1.99
LRCH3-210ENST00000461674 NDUFB1O75438 58 aa2.61□□□□□ -1.99
LRCH3-210ENST00000461674 A0A096LNI7 61 aa2.59□□□□□ -1.99
LRCH3-210ENST00000461674 SMIM2Q9BVW6 85 aa2.59□□□□□ -1.99
LRCH3-210ENST00000461674 MUC17Q685J3 4493 aa2.56□□□□□ -2
LRCH3-210ENST00000461674 LINC00959A0A1B0GUT2 108 aa2.55□□□□□ -2
LRCH3-210ENST00000461674 H3BVH4 76 aa2.55□□□□□ -2
LRCH3-210ENST00000461674 POLR2KP53803 58 aaKnown RBP2.55□□□□□ -2
LRCH3-210ENST00000461674 CLPSL2Q6UWE3 100 aa2.55□□□□□ -2
LRCH3-210ENST00000461674 IGIPA6NJ69 53 aa2.54□□□□□ -2
LRCH3-210ENST00000461674 ATXN8Q156A1 80 aa2.54□□□□□ -2
LRCH3-210ENST00000461674 M0QY20 66 aa2.53□□□□□ -2
LRCH3-210ENST00000461674 I3L3M4 83 aa2.52□□□□□ -2.01
LRCH3-210ENST00000461674 LCE3AQ5TA76 89 aa2.52□□□□□ -2.01
LRCH3-210ENST00000461674 RPL39LQ96EH5 51 aaKnown RBP2.5□□□□□ -2.01
LRCH3-210ENST00000461674 NDUFA1O15239 70 aa2.48□□□□□ -2.01
LRCH3-210ENST00000461674 MT1HP80294 61 aa2.48□□□□□ -2.01
LRCH3-210ENST00000461674 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
LRCH3-210ENST00000461674 RPL39P62891 51 aaKnown RBP2.47□□□□□ -2.01
LRCH3-210ENST00000461674 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
LRCH3-210ENST00000461674 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
LRCH3-210ENST00000461674 COX7BP24311 80 aa2.46□□□□□ -2.02
LRCH3-210ENST00000461674 NREPQ16612 68 aa2.46□□□□□ -2.02
LRCH3-210ENST00000461674 KRTAP4-1Q9BYQ7 146 aa2.46□□□□□ -2.02
LRCH3-210ENST00000461674 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
LRCH3-210ENST00000461674 H0YGX0 51 aa2.45□□□□□ -2.02
LRCH3-210ENST00000461674 RPS29P62273 56 aaKnown RBP2.44□□□□□ -2.02
LRCH3-210ENST00000461674 LINC00308Q8TCZ7 52 aa2.44□□□□□ -2.02
LRCH3-210ENST00000461674 TP53AIP1Q9HCN2 124 aa2.44□□□□□ -2.02
LRCH3-210ENST00000461674 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
LRCH3-210ENST00000461674 A0A0D9SG42 100 aa2.43□□□□□ -2.02
LRCH3-210ENST00000461674 SPINK1P00995 79 aa2.43□□□□□ -2.02
LRCH3-210ENST00000461674 C6orf48Q9UBA6 75 aa2.43□□□□□ -2.02
LRCH3-210ENST00000461674 USH2AO75445 5202 aa2.43□□□□□ -2.02
LRCH3-210ENST00000461674 CDKN2A-AS1Q9UH64 79 aa2.42□□□□□ -2.02
LRCH3-210ENST00000461674 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
LRCH3-210ENST00000461674 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
LRCH3-210ENST00000461674 M0R2T5 61 aa2.4□□□□□ -2.03
LRCH3-210ENST00000461674 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.03
LRCH3-210ENST00000461674 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
LRCH3-210ENST00000461674 LINC00158P58513 81 aa2.38□□□□□ -2.03
LRCH3-210ENST00000461674 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
LRCH3-210ENST00000461674 Q8IZM0 81 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms